Literature DB >> 24817020

Assembly and nuclear export of pre-ribosomal particles in budding yeast.

Stefan Gerhardy1, Anna Maria Menet, Cohue Peña, Janusz Jurand Petkowski, Vikram Govind Panse.   

Abstract

The ribosome is responsible for the final step of decoding genetic information into proteins. Therefore, correct assembly of ribosomes is a fundamental task for all living cells. In eukaryotes, the construction of the ribosome which begins in the nucleolus requires coordinated efforts of >350 specialized factors that associate with pre-ribosomal particles at distinct stages to perform specific assembly steps. On their way through the nucleus, diverse energy-consuming enzymes are thought to release assembly factors from maturing pre-ribosomal particles after accomplishing their task(s). Subsequently, recruitment of export factors prepares pre-ribosomal particles for transport through nuclear pore complexes. Pre-ribosomes are exported into the cytoplasm in a functionally inactive state, where they undergo final maturation before initiating translation. Accumulating evidence indicates a tight coupling between nuclear export, cytoplasmic maturation, and final proofreading of the ribosome. In this review, we summarize our current understanding of nuclear export of pre-ribosomal subunits and cytoplasmic maturation steps that render pre-ribosomal subunits translation-competent.

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Year:  2014        PMID: 24817020     DOI: 10.1007/s00412-014-0463-z

Source DB:  PubMed          Journal:  Chromosoma        ISSN: 0009-5915            Impact factor:   4.316


  180 in total

1.  Xenopus U3 snoRNA GAC-Box A' and Box A sequences play distinct functional roles in rRNA processing.

Authors:  A V Borovjagin; S A Gerbi
Journal:  Mol Cell Biol       Date:  2001-09       Impact factor: 4.272

2.  Ribosomal precursor particles from yeast.

Authors:  J Trapman; J Retèl; R J Planta
Journal:  Exp Cell Res       Date:  1975-01       Impact factor: 3.905

3.  The carboxy-terminal extension of yeast ribosomal protein S14 is necessary for maturation of 43S preribosomes.

Authors:  Jelena Jakovljevic; Pamela Antúnez de Mayolo; Tiffany D Miles; Theresa Mai-Ly Nguyen; Isabelle Léger-Silvestre; Nicole Gas; John L Woolford
Journal:  Mol Cell       Date:  2004-05-07       Impact factor: 17.970

4.  The specialized cytosolic J-protein, Jjj1, functions in 60S ribosomal subunit biogenesis.

Authors:  Alison E Meyer; Nai-Jung Hung; Peizhen Yang; Arlen W Johnson; Elizabeth A Craig
Journal:  Proc Natl Acad Sci U S A       Date:  2007-01-22       Impact factor: 11.205

5.  Nuclear export of ribosomal 60S subunits by the general mRNA export receptor Mex67-Mtr2.

Authors:  Wei Yao; Daniela Roser; Alwin Köhler; Bettina Bradatsch; Jochen Bassler; Ed Hurt
Journal:  Mol Cell       Date:  2007-04-13       Impact factor: 17.970

Review 6.  Assembly of bacterial ribosomes.

Authors:  Zahra Shajani; Michael T Sykes; James R Williamson
Journal:  Annu Rev Biochem       Date:  2011       Impact factor: 23.643

7.  Synthesis and assembly of the box C+D small nucleolar RNPs.

Authors:  D L Lafontaine; D Tollervey
Journal:  Mol Cell Biol       Date:  2000-04       Impact factor: 4.272

8.  Rcl1p, the yeast protein similar to the RNA 3'-phosphate cyclase, associates with U3 snoRNP and is required for 18S rRNA biogenesis.

Authors:  E Billy; T Wegierski; F Nasr; W Filipowicz
Journal:  EMBO J       Date:  2000-05-02       Impact factor: 11.598

9.  Surveillance of nuclear-restricted pre-ribosomes within a subnucleolar region of Saccharomyces cerevisiae.

Authors:  Christophe Dez; Jonathan Houseley; David Tollervey
Journal:  EMBO J       Date:  2006-03-16       Impact factor: 11.598

10.  Rrp17p is a eukaryotic exonuclease required for 5' end processing of Pre-60S ribosomal RNA.

Authors:  Marlene Oeffinger; Daniel Zenklusen; Angelica Ferguson; Karen E Wei; Aziz El Hage; David Tollervey; Brian T Chait; Robert H Singer; Michael P Rout
Journal:  Mol Cell       Date:  2009-12-11       Impact factor: 17.970

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  26 in total

1.  RNA helicase-mediated regulation of snoRNP dynamics on pre-ribosomes and rRNA 2'-O-methylation.

Authors:  Gerald Ryan R Aquino; Nicolai Krogh; Philipp Hackert; Roman Martin; Jimena Davila Gallesio; Robert W van Nues; Claudia Schneider; Nicholas J Watkins; Henrik Nielsen; Katherine E Bohnsack; Markus T Bohnsack
Journal:  Nucleic Acids Res       Date:  2021-04-19       Impact factor: 16.971

2.  Plant-specific ribosome biogenesis factors in Arabidopsis thaliana with essential function in rRNA processing.

Authors:  Denise Palm; Deniz Streit; Thiruvenkadam Shanmugam; Benjamin L Weis; Maike Ruprecht; Stefan Simm; Enrico Schleiff
Journal:  Nucleic Acids Res       Date:  2019-02-28       Impact factor: 16.971

3.  Nmd3 is a structural mimic of eIF5A, and activates the cpGTPase Lsg1 during 60S ribosome biogenesis.

Authors:  Andrey G Malyutin; Sharmishtha Musalgaonkar; Stephanie Patchett; Joachim Frank; Arlen W Johnson
Journal:  EMBO J       Date:  2017-02-08       Impact factor: 11.598

4.  The Roles of Puf6 and Loc1 in 60S Biogenesis Are Interdependent, and Both Are Required for Efficient Accommodation of Rpl43.

Authors:  Yi-Ting Yang; Ya-Han Ting; Kei-Jen Liang; Kai-Yin Lo
Journal:  J Biol Chem       Date:  2016-07-25       Impact factor: 5.157

Review 5.  Quick or quality? How mRNA escapes nuclear quality control during stress.

Authors:  Gesa Zander; Heike Krebber
Journal:  RNA Biol       Date:  2017-07-31       Impact factor: 4.652

6.  Structural snapshot of cytoplasmic pre-60S ribosomal particles bound by Nmd3, Lsg1, Tif6 and Reh1.

Authors:  Chengying Ma; Shan Wu; Ningning Li; Yan Chen; Kaige Yan; Zhifei Li; Lvqin Zheng; Jianlin Lei; John L Woolford; Ning Gao
Journal:  Nat Struct Mol Biol       Date:  2017-01-23       Impact factor: 15.369

7.  Eukaryotic Ribosome assembly and Nucleocytoplasmic Transport.

Authors:  Michaela Oborská-Oplová; Ute Fischer; Martin Altvater; Vikram Govind Panse
Journal:  Methods Mol Biol       Date:  2022

8.  Wide mutational analysis to ascertain the functional roles of eL33 in ribosome biogenesis and translation initiation.

Authors:  Pilar Martín-Marcos; Álvaro Gil-Hernández; Mercedes Tamame
Journal:  Curr Genet       Date:  2022-08-22       Impact factor: 2.695

9.  Immature large ribosomal subunits containing the 7S pre-rRNA can engage in translation in Saccharomyces cerevisiae.

Authors:  Olga Rodríguez-Galán; Juan J García-Gómez; Dieter Kressler; Jesús de la Cruz
Journal:  RNA Biol       Date:  2015       Impact factor: 4.652

10.  The DExD box ATPase DDX55 is recruited to domain IV of the 28S ribosomal RNA by its C-terminal region.

Authors:  Priyanka Choudhury; Jens Kretschmer; Philipp Hackert; Katherine E Bohnsack; Markus T Bohnsack
Journal:  RNA Biol       Date:  2020-10-13       Impact factor: 4.652

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