| Literature DB >> 22346867 |
Ibrahim Göker Zaman, Nagihan Caylak Delibaş, Hacali Necefoğlu, Tuncer Hökelek.
Abstract
The asymmetric unit of the title compound, [Ni(C(6)H(6)N(2)O)(2)(H(2)O)(4)](C(7)H(5)O(3))(2)·4H(2)O, contains one-half of the complex cation with the Ni(II) ion located on an inversion center, a 3-hy-droxy-benzoate counter-anion and two uncoordinated water mol-ecules. Four water O atoms in the equatorial plane around the Ni(II) ion [Ni-O = 2.052 (2) and 2.079 (2) Å] form a slightly distorted square-planar arrangement, which is completed up to a distorted octa-hedron by the two N atoms [Ni-N = 2.075 (3) Å] from two isonicotinamide ligands. In the anion, the carboxyl-ate group is twisted from the attached benzene ring by 8.8 (3)°. In the crystal, a three-dimensional hydrogen-bonding network, formed by classical O-H⋯O and N-H⋯O hydrogen bonds, consolidates the crystal packing, which also exhibits π-π inter-actions between the benzene and pyridine rings, with centroid-centroid distances of 3.455 (2) and 3.621 (2) Å, respectively.Entities:
Year: 2012 PMID: 22346867 PMCID: PMC3274920 DOI: 10.1107/S1600536812002218
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Ni(C6H6N2O)2(H2O)4](C7H5O3)2·4H2O | |
| Monoclinic, | Mo |
| Hall symbol: -P 2yn | Cell parameters from 7580 reflections |
| θ = 2.4–28.4° | |
| µ = 0.73 mm−1 | |
| β = 100.186 (3)° | Rod-shaped, blue |
| 0.46 × 0.33 × 0.18 mm | |
| Bruker Kappa APEXII CCD area-detector diffractometer | 3723 independent reflections |
| Radiation source: fine-focus sealed tube | 3365 reflections with |
| graphite | |
| φ and ω scans | θmax = 28.6°, θmin = 1.9° |
| Absorption correction: multi-scan ( | |
| 13495 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 3723 reflections | (Δ/σ)max < 0.001 |
| 256 parameters | Δρmax = 0.86 e Å−3 |
| 12 restraints | Δρmin = −0.69 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Ni1 | 0.5000 | 0.0000 | 0.5000 | 0.00840 (16) | |
| O1 | −0.0786 (4) | 0.04089 (13) | 0.29703 (18) | 0.0135 (5) | |
| O2 | −0.1778 (4) | 0.11616 (14) | 0.16276 (17) | 0.0145 (5) | |
| O3 | −0.0150 (4) | 0.39248 (14) | 0.27901 (19) | 0.0151 (5) | |
| H31 | −0.011 (8) | 0.428 (3) | 0.317 (4) | 0.027 (13)* | |
| O4 | 0.3941 (4) | 0.32984 (14) | 0.18014 (18) | 0.0160 (5) | |
| O5 | 0.3225 (4) | 0.04752 (14) | 0.59662 (18) | 0.0128 (5) | |
| H51 | 0.372 (9) | 0.068 (3) | 0.653 (3) | 0.051 (17)* | |
| H52 | 0.245 (8) | 0.014 (3) | 0.616 (5) | 0.054 (18)* | |
| O6 | 0.7696 (4) | 0.03386 (14) | 0.58654 (19) | 0.0148 (5) | |
| H61 | 0.803 (7) | 0.0796 (16) | 0.609 (3) | 0.026 (12)* | |
| H62 | 0.851 (7) | 0.000 (3) | 0.618 (4) | 0.041 (16)* | |
| O7 | 0.0025 (4) | 0.51961 (15) | 0.40009 (19) | 0.0168 (5) | |
| H71 | −0.018 (9) | 0.508 (4) | 0.453 (2) | 0.050* | |
| H72 | −0.101 (6) | 0.548 (3) | 0.380 (4) | 0.047 (17)* | |
| O8 | 0.0926 (4) | 0.06780 (16) | 0.04380 (19) | 0.0192 (5) | |
| H81 | 0.196 (5) | 0.060 (4) | 0.077 (4) | 0.050* | |
| H82 | 0.021 (7) | 0.082 (3) | 0.085 (3) | 0.047 (17)* | |
| N1 | 0.4858 (4) | 0.10763 (15) | 0.4259 (2) | 0.0098 (5) | |
| N2 | 0.5148 (5) | 0.39569 (17) | 0.3228 (2) | 0.0140 (6) | |
| H21 | 0.525 (7) | 0.439 (3) | 0.296 (3) | 0.017 (11)* | |
| H22 | 0.559 (8) | 0.396 (3) | 0.385 (4) | 0.030 (13)* | |
| C1 | −0.1092 (5) | 0.10742 (18) | 0.2549 (2) | 0.0112 (6) | |
| C2 | −0.0587 (5) | 0.18065 (18) | 0.3173 (2) | 0.0106 (6) | |
| C3 | −0.0642 (5) | 0.25416 (18) | 0.2706 (2) | 0.0110 (6) | |
| H3 | −0.1005 | 0.2580 | 0.2013 | 0.013* | |
| C4 | −0.0156 (5) | 0.32139 (18) | 0.3277 (3) | 0.0120 (6) | |
| C5 | 0.0358 (5) | 0.31639 (19) | 0.4314 (3) | 0.0130 (6) | |
| H5 | 0.0684 | 0.3619 | 0.4694 | 0.016* | |
| C6 | 0.0386 (5) | 0.2433 (2) | 0.4783 (3) | 0.0137 (6) | |
| H6 | 0.0707 | 0.2399 | 0.5478 | 0.016* | |
| C7 | −0.0068 (5) | 0.17514 (19) | 0.4214 (2) | 0.0121 (6) | |
| H7 | −0.0026 | 0.1261 | 0.4526 | 0.015* | |
| C8 | 0.4370 (5) | 0.11290 (18) | 0.3253 (2) | 0.0113 (6) | |
| H8 | 0.4102 | 0.0666 | 0.2884 | 0.014* | |
| C9 | 0.4250 (5) | 0.18391 (18) | 0.2748 (2) | 0.0119 (6) | |
| H9 | 0.3897 | 0.1851 | 0.2053 | 0.014* | |
| C10 | 0.4660 (5) | 0.25372 (18) | 0.3287 (2) | 0.0106 (6) | |
| C11 | 0.5176 (5) | 0.24858 (18) | 0.4322 (2) | 0.0124 (6) | |
| H11 | 0.5467 | 0.2940 | 0.4706 | 0.015* | |
| C12 | 0.5253 (5) | 0.17508 (19) | 0.4776 (2) | 0.0118 (6) | |
| H12 | 0.5594 | 0.1724 | 0.5471 | 0.014* | |
| C13 | 0.4552 (5) | 0.33050 (18) | 0.2717 (2) | 0.0115 (6) |
| Ni1 | 0.0102 (3) | 0.0075 (3) | 0.0072 (3) | −0.00025 (19) | 0.00071 (19) | 0.00018 (19) |
| O1 | 0.0146 (11) | 0.0103 (10) | 0.0151 (12) | 0.0006 (8) | 0.0015 (9) | 0.0001 (8) |
| O2 | 0.0171 (12) | 0.0151 (11) | 0.0105 (11) | −0.0004 (9) | 0.0007 (9) | −0.0006 (9) |
| O3 | 0.0218 (13) | 0.0101 (11) | 0.0132 (12) | 0.0002 (9) | 0.0022 (10) | 0.0006 (9) |
| O4 | 0.0246 (13) | 0.0122 (11) | 0.0107 (11) | 0.0019 (9) | 0.0016 (10) | 0.0017 (8) |
| O5 | 0.0145 (12) | 0.0136 (11) | 0.0113 (11) | −0.0003 (8) | 0.0049 (9) | −0.0006 (9) |
| O6 | 0.0155 (12) | 0.0098 (11) | 0.0162 (12) | 0.0000 (9) | −0.0052 (9) | −0.0013 (9) |
| O7 | 0.0199 (13) | 0.0139 (11) | 0.0155 (12) | 0.0031 (9) | 0.0004 (10) | 0.0000 (9) |
| O8 | 0.0202 (13) | 0.0214 (13) | 0.0173 (13) | 0.0031 (10) | 0.0064 (10) | 0.0001 (10) |
| N1 | 0.0084 (12) | 0.0117 (12) | 0.0096 (12) | 0.0005 (9) | 0.0025 (10) | 0.0005 (9) |
| N2 | 0.0199 (15) | 0.0109 (13) | 0.0105 (14) | −0.0009 (10) | 0.0007 (11) | 0.0027 (10) |
| C1 | 0.0072 (13) | 0.0127 (14) | 0.0142 (15) | 0.0003 (10) | 0.0030 (11) | −0.0011 (11) |
| C2 | 0.0079 (14) | 0.0115 (14) | 0.0126 (15) | 0.0008 (10) | 0.0022 (11) | −0.0012 (11) |
| C3 | 0.0095 (14) | 0.0147 (14) | 0.0088 (14) | 0.0014 (11) | 0.0015 (11) | 0.0008 (11) |
| C4 | 0.0094 (14) | 0.0108 (14) | 0.0160 (16) | 0.0009 (11) | 0.0027 (12) | 0.0020 (12) |
| C5 | 0.0117 (14) | 0.0129 (14) | 0.0141 (16) | 0.0003 (11) | 0.0019 (12) | −0.0030 (11) |
| C6 | 0.0133 (15) | 0.0172 (15) | 0.0101 (15) | 0.0010 (11) | 0.0010 (12) | 0.0001 (12) |
| C7 | 0.0129 (15) | 0.0116 (14) | 0.0124 (15) | 0.0017 (11) | 0.0034 (12) | 0.0020 (11) |
| C8 | 0.0107 (14) | 0.0113 (14) | 0.0118 (15) | −0.0002 (11) | 0.0019 (11) | −0.0009 (11) |
| C9 | 0.0120 (14) | 0.0132 (14) | 0.0105 (15) | 0.0002 (11) | 0.0016 (12) | 0.0006 (11) |
| C10 | 0.0092 (14) | 0.0102 (13) | 0.0125 (15) | 0.0011 (10) | 0.0024 (11) | 0.0018 (11) |
| C11 | 0.0143 (15) | 0.0100 (14) | 0.0129 (15) | 0.0003 (11) | 0.0026 (12) | −0.0011 (11) |
| C12 | 0.0107 (14) | 0.0135 (14) | 0.0115 (15) | 0.0007 (11) | 0.0028 (11) | −0.0003 (11) |
| C13 | 0.0100 (14) | 0.0119 (14) | 0.0133 (15) | 0.0022 (11) | 0.0038 (12) | 0.0020 (11) |
| Ni1—O5 | 2.079 (2) | N2—H21 | 0.83 (5) |
| Ni1—O5i | 2.079 (2) | N2—H22 | 0.84 (5) |
| Ni1—O6 | 2.052 (2) | C2—C1 | 1.505 (4) |
| Ni1—O6i | 2.052 (2) | C2—C3 | 1.394 (4) |
| Ni1—N1 | 2.075 (3) | C2—C7 | 1.395 (4) |
| Ni1—N1i | 2.075 (3) | C3—H3 | 0.9300 |
| O1—C1 | 1.263 (4) | C4—C3 | 1.383 (4) |
| O2—C1 | 1.260 (4) | C5—C4 | 1.389 (5) |
| O3—C4 | 1.373 (4) | C5—C6 | 1.390 (5) |
| O3—H31 | 0.79 (5) | C5—H5 | 0.9300 |
| O4—C13 | 1.236 (4) | C6—H6 | 0.9300 |
| O5—H51 | 0.85 (2) | C7—C6 | 1.391 (5) |
| O5—H52 | 0.85 (2) | C7—H7 | 0.9300 |
| O6—H61 | 0.85 (2) | C8—H8 | 0.9300 |
| O6—H62 | 0.85 (2) | C9—C8 | 1.378 (4) |
| O7—H71 | 0.784 (18) | C9—C10 | 1.391 (4) |
| O7—H72 | 0.85 (2) | C9—H9 | 0.9300 |
| O8—H81 | 0.769 (18) | C10—C11 | 1.386 (5) |
| O8—H82 | 0.83 (2) | C10—C13 | 1.507 (4) |
| N1—C8 | 1.347 (4) | C11—H11 | 0.9300 |
| N1—C12 | 1.341 (4) | C12—C11 | 1.385 (4) |
| N2—C13 | 1.326 (4) | C12—H12 | 0.9300 |
| O5—Ni1—O5i | 180.00 (9) | C7—C2—C1 | 120.3 (3) |
| O6—Ni1—O5 | 94.23 (10) | C2—C3—H3 | 120.1 |
| O6i—Ni1—O5 | 85.77 (10) | C4—C3—C2 | 119.7 (3) |
| O6—Ni1—O5i | 85.77 (10) | C4—C3—H3 | 120.1 |
| O6i—Ni1—O5i | 94.23 (10) | O3—C4—C3 | 118.2 (3) |
| O6i—Ni1—O6 | 180.0 | O3—C4—C5 | 121.2 (3) |
| O6—Ni1—N1 | 89.53 (10) | C3—C4—C5 | 120.5 (3) |
| O6i—Ni1—N1 | 90.47 (10) | C4—C5—C6 | 119.9 (3) |
| O6—Ni1—N1i | 90.47 (10) | C4—C5—H5 | 120.1 |
| O6i—Ni1—N1i | 89.53 (10) | C6—C5—H5 | 120.1 |
| N1—Ni1—O5 | 89.02 (10) | C5—C6—C7 | 120.1 (3) |
| N1i—Ni1—O5 | 90.98 (10) | C5—C6—H6 | 120.0 |
| N1—Ni1—O5i | 90.98 (10) | C7—C6—H6 | 120.0 |
| N1i—Ni1—O5i | 89.02 (10) | C2—C7—H7 | 120.1 |
| N1i—Ni1—N1 | 180.0 | C6—C7—C2 | 119.8 (3) |
| C4—O3—H31 | 111 (4) | C6—C7—H7 | 120.1 |
| Ni1—O5—H51 | 123 (4) | N1—C8—C9 | 122.8 (3) |
| Ni1—O5—H52 | 113 (4) | N1—C8—H8 | 118.6 |
| H52—O5—H51 | 99 (6) | C9—C8—H8 | 118.6 |
| Ni1—O6—H61 | 128 (3) | C8—C9—C10 | 119.4 (3) |
| Ni1—O6—H62 | 121 (4) | C8—C9—H9 | 120.3 |
| H61—O6—H62 | 110 (5) | C10—C9—H9 | 120.3 |
| H72—O7—H71 | 100 (4) | C9—C10—C13 | 118.5 (3) |
| H81—O8—H82 | 103 (4) | C11—C10—C9 | 117.9 (3) |
| C8—N1—Ni1 | 122.0 (2) | C11—C10—C13 | 123.6 (3) |
| C12—N1—Ni1 | 120.4 (2) | C10—C11—H11 | 120.4 |
| C12—N1—C8 | 117.6 (3) | C12—C11—C10 | 119.3 (3) |
| C13—N2—H21 | 123 (3) | C12—C11—H11 | 120.4 |
| C13—N2—H22 | 123 (3) | N1—C12—C11 | 122.9 (3) |
| H21—N2—H22 | 113 (4) | N1—C12—H12 | 118.5 |
| O1—C1—C2 | 118.5 (3) | C11—C12—H12 | 118.5 |
| O2—C1—O1 | 123.7 (3) | O4—C13—N2 | 123.2 (3) |
| O2—C1—C2 | 117.8 (3) | O4—C13—C10 | 119.0 (3) |
| C3—C2—C1 | 119.6 (3) | N2—C13—C10 | 117.9 (3) |
| C3—C2—C7 | 120.1 (3) | ||
| O5—Ni1—N1—C8 | −131.1 (3) | C1—C2—C7—C6 | −179.7 (3) |
| O5i—Ni1—N1—C8 | 48.9 (3) | C3—C2—C7—C6 | 0.2 (5) |
| O5—Ni1—N1—C12 | 48.7 (2) | O3—C4—C3—C2 | 177.5 (3) |
| O5i—Ni1—N1—C12 | −131.3 (2) | C5—C4—C3—C2 | −0.9 (5) |
| O6—Ni1—N1—C8 | 134.6 (3) | C6—C5—C4—O3 | −178.4 (3) |
| O6i—Ni1—N1—C8 | −45.4 (3) | C6—C5—C4—C3 | 0.0 (5) |
| O6—Ni1—N1—C12 | −45.5 (2) | C4—C5—C6—C7 | 1.1 (5) |
| O6i—Ni1—N1—C12 | 134.5 (2) | C2—C7—C6—C5 | −1.2 (5) |
| Ni1—N1—C8—C9 | 179.4 (2) | C10—C9—C8—N1 | 0.5 (5) |
| C12—N1—C8—C9 | −0.5 (5) | C8—C9—C10—C11 | −0.1 (5) |
| Ni1—N1—C12—C11 | −179.8 (2) | C8—C9—C10—C13 | 179.0 (3) |
| C8—N1—C12—C11 | 0.1 (5) | C9—C10—C11—C12 | −0.3 (5) |
| C3—C2—C1—O1 | 171.2 (3) | C13—C10—C11—C12 | −179.4 (3) |
| C3—C2—C1—O2 | −8.0 (4) | C9—C10—C13—O4 | 6.0 (5) |
| C7—C2—C1—O1 | −8.9 (5) | C9—C10—C13—N2 | −173.2 (3) |
| C7—C2—C1—O2 | 171.9 (3) | C11—C10—C13—O4 | −175.0 (3) |
| C1—C2—C3—C4 | −179.3 (3) | C11—C10—C13—N2 | 5.8 (5) |
| C7—C2—C3—C4 | 0.8 (5) | N1—C12—C11—C10 | 0.3 (5) |
| H··· | ||||
| N2—H21···O1ii | 0.83 (5) | 2.20 (5) | 3.018 (4) | 169 (4) |
| N2—H22···O8iii | 0.84 (5) | 2.21 (5) | 3.012 (4) | 159 (5) |
| O3—H31···O7 | 0.79 (5) | 1.91 (5) | 2.696 (4) | 175 (5) |
| O5—H51···O3iii | 0.85 (4) | 1.87 (4) | 2.716 (3) | 177 (5) |
| O5—H52···O1iv | 0.84 (5) | 1.99 (6) | 2.795 (4) | 160 (6) |
| O6—H61···O4iii | 0.85 (3) | 1.86 (3) | 2.693 (3) | 169 (4) |
| O6—H62···O1i | 0.85 (5) | 1.87 (5) | 2.685 (4) | 159 (5) |
| O7—H71···O7v | 0.78 (4) | 2.03 (3) | 2.795 (4) | 167 (6) |
| O7—H72···O2vi | 0.85 (5) | 1.88 (5) | 2.731 (4) | 177 (5) |
| O8—H81···O7vii | 0.77 (4) | 2.10 (4) | 2.802 (4) | 152 (6) |
| O8—H82···O2 | 0.83 (4) | 1.93 (5) | 2.752 (4) | 171 (4) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N2—H21⋯O1i | 0.83 (5) | 2.20 (5) | 3.018 (4) | 169 (4) |
| N2—H22⋯O8ii | 0.84 (5) | 2.21 (5) | 3.012 (4) | 159 (5) |
| O3—H31⋯O7 | 0.79 (5) | 1.91 (5) | 2.696 (4) | 175 (5) |
| O5—H51⋯O3ii | 0.85 (4) | 1.87 (4) | 2.716 (3) | 177 (5) |
| O5—H52⋯O1iii | 0.84 (5) | 1.99 (6) | 2.795 (4) | 160 (6) |
| O6—H61⋯O4ii | 0.85 (3) | 1.86 (3) | 2.693 (3) | 169 (4) |
| O6—H62⋯O1iv | 0.85 (5) | 1.87 (5) | 2.685 (4) | 159 (5) |
| O7—H71⋯O7v | 0.78 (4) | 2.03 (3) | 2.795 (4) | 167 (6) |
| O7—H72⋯O2vi | 0.85 (5) | 1.88 (5) | 2.731 (4) | 177 (5) |
| O8—H81⋯O7vii | 0.77 (4) | 2.10 (4) | 2.802 (4) | 152 (6) |
| O8—H82⋯O2 | 0.83 (4) | 1.93 (5) | 2.752 (4) | 171 (4) |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) ; (vi) ; (vii) .