| Literature DB >> 21577412 |
Tuncer Hökelek, Hakan Dal, Barış Tercan, Ozgür Aybirdi, Hacali Necefoğlu.
Abstract
The title Co(II) complex, [Co(C(9)H(10)NO(2))(2)(C(10)H(14)N(2)O)(2)(H(2)O)(2)], is centrosymmetric. It contains two dimethyl-amino-benzoate (DMAB) and two diethyl-nicotinamide (DENA) ligands and two water mol-ecules, all of them being monodentate. The four O atoms in the equatorial plane around the Co atom form a slightly distorted square-planar arrangement, while the slightly distorted octa-hedral coordination is completed by the two pyridine N atoms of DENA ligands with the Co-N distance of 2.1519 (11) Å in the axial positions. The Co atom is displaced out of the least-squares plane of the carboxyl-ate group by -0.781 (1) Å. The dihedral angle between the carboxyl-ate group and the adjacent benzene ring is 5.05 (7)°, while the pyridine and benzene rings are oriented at a dihedral angle of 71.48 (5)°. In the crystal structure, inter-molecular O-H⋯O and C-H⋯O hydrogen bonds link the mol-ecules into a three-dimensional network. Two weak C-H⋯π inter-actions are also present.Entities:
Year: 2009 PMID: 21577412 PMCID: PMC2970090 DOI: 10.1107/S1600536809030980
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Co(C9H10NO2)2(C10H14N2O)2(H2O)2] | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 9065 reflections |
| θ = 2.4–28.3° | |
| µ = 0.50 mm−1 | |
| β = 98.492 (1)° | Block, red |
| 0.42 × 0.22 × 0.12 mm | |
| Bruker Kappa APEXII CCD area-detector diffractometer | 4821 independent reflections |
| Radiation source: fine-focus sealed tube | 4137 reflections with |
| graphite | |
| φ and ω scans | θmax = 28.3°, θmin = 1.7° |
| Absorption correction: multi-scan ( | |
| 18749 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 4821 reflections | (Δ/σ)max < 0.001 |
| 251 parameters | Δρmax = 0.40 e Å−3 |
| 3 restraints | Δρmin = −0.30 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Co1 | 0.5000 | 0.5000 | 0.5000 | 0.01335 (8) | |
| O1 | 0.54021 (15) | 0.50614 (5) | 0.36270 (6) | 0.0169 (2) | |
| O2 | 0.87853 (15) | 0.52883 (5) | 0.37060 (7) | 0.0196 (2) | |
| O3 | 0.76748 (16) | 0.28543 (5) | 0.75280 (7) | 0.0219 (2) | |
| O4 | 0.20770 (15) | 0.45517 (5) | 0.45875 (7) | 0.0182 (2) | |
| H41 | 0.162 (3) | 0.4543 (8) | 0.5144 (10) | 0.023* | |
| H42 | 0.114 (3) | 0.4789 (9) | 0.4204 (11) | 0.023* | |
| N1 | 0.63544 (17) | 0.40399 (6) | 0.51022 (8) | 0.0155 (2) | |
| N2 | 1.09307 (19) | 0.27891 (6) | 0.71639 (8) | 0.0191 (2) | |
| N3 | 0.6955 (2) | 0.39432 (7) | −0.02756 (9) | 0.0301 (3) | |
| C1 | 0.7089 (2) | 0.50704 (6) | 0.32932 (9) | 0.0151 (3) | |
| C2 | 0.7037 (2) | 0.47929 (7) | 0.23444 (9) | 0.0163 (3) | |
| C3 | 0.5191 (2) | 0.45744 (7) | 0.18361 (10) | 0.0208 (3) | |
| H3 | 0.3938 | 0.4610 | 0.2092 | 0.025* | |
| C4 | 0.5143 (2) | 0.43063 (8) | 0.09649 (10) | 0.0241 (3) | |
| H4 | 0.3857 | 0.4170 | 0.0628 | 0.029* | |
| C5 | 0.6975 (2) | 0.42340 (7) | 0.05741 (10) | 0.0224 (3) | |
| C6 | 0.8826 (2) | 0.44567 (8) | 0.10906 (10) | 0.0235 (3) | |
| H6 | 1.0089 | 0.4418 | 0.0844 | 0.028* | |
| C7 | 0.8845 (2) | 0.47324 (7) | 0.19537 (10) | 0.0206 (3) | |
| H7 | 1.0118 | 0.4883 | 0.2286 | 0.025* | |
| C8 | 0.6312 (2) | 0.36554 (7) | 0.43557 (9) | 0.0172 (3) | |
| H8 | 0.5692 | 0.3820 | 0.3774 | 0.021* | |
| C9 | 0.7131 (2) | 0.30305 (7) | 0.43964 (9) | 0.0192 (3) | |
| H9 | 0.7071 | 0.2772 | 0.3855 | 0.023* | |
| C10 | 0.8040 (2) | 0.27915 (7) | 0.52449 (10) | 0.0186 (3) | |
| H10 | 0.8615 | 0.2365 | 0.5295 | 0.022* | |
| C11 | 0.8101 (2) | 0.31852 (7) | 0.60242 (9) | 0.0153 (3) | |
| C12 | 0.7227 (2) | 0.38028 (7) | 0.59202 (9) | 0.0150 (3) | |
| H12 | 0.7248 | 0.4069 | 0.6452 | 0.018* | |
| C13 | 0.8903 (2) | 0.29329 (6) | 0.69730 (9) | 0.0160 (3) | |
| C14 | 1.2464 (2) | 0.29630 (8) | 0.65634 (11) | 0.0251 (3) | |
| H14A | 1.3649 | 0.3187 | 0.6937 | 0.030* | |
| H14B | 1.1825 | 0.3273 | 0.6086 | 0.030* | |
| C15 | 1.3266 (3) | 0.23750 (10) | 0.60918 (14) | 0.0388 (4) | |
| H15A | 1.4134 | 0.2523 | 0.5640 | 0.058* | |
| H15B | 1.2091 | 0.2124 | 0.5776 | 0.058* | |
| H15C | 1.4089 | 0.2099 | 0.6555 | 0.058* | |
| C16 | 1.1660 (2) | 0.24446 (8) | 0.80324 (11) | 0.0248 (3) | |
| H16A | 1.1023 | 0.2647 | 0.8537 | 0.030* | |
| H16B | 1.3183 | 0.2495 | 0.8183 | 0.030* | |
| C17 | 1.1129 (3) | 0.17229 (8) | 0.79793 (12) | 0.0311 (4) | |
| H17A | 1.1568 | 0.1520 | 0.8582 | 0.047* | |
| H17B | 1.1848 | 0.1513 | 0.7515 | 0.047* | |
| H17C | 0.9628 | 0.1670 | 0.7806 | 0.047* | |
| C18 | 0.5005 (3) | 0.37807 (9) | −0.08350 (11) | 0.0334 (4) | |
| H18A | 0.5267 | 0.3611 | −0.1432 | 0.050* | |
| H18B | 0.4139 | 0.4173 | −0.0933 | 0.050* | |
| H18C | 0.4287 | 0.3448 | −0.0519 | 0.050* | |
| C19 | 0.8816 (3) | 0.39299 (9) | −0.06991 (12) | 0.0361 (4) | |
| H19A | 0.8523 | 0.3719 | −0.1305 | 0.054* | |
| H19B | 0.9896 | 0.3685 | −0.0305 | 0.054* | |
| H19C | 0.9295 | 0.4378 | −0.0775 | 0.054* |
| Co1 | 0.01466 (13) | 0.01570 (13) | 0.00949 (12) | 0.00226 (9) | 0.00115 (9) | −0.00087 (9) |
| O1 | 0.0169 (5) | 0.0216 (5) | 0.0122 (4) | 0.0031 (4) | 0.0019 (4) | −0.0006 (4) |
| O2 | 0.0188 (5) | 0.0258 (5) | 0.0138 (5) | −0.0010 (4) | 0.0015 (4) | −0.0012 (4) |
| O3 | 0.0251 (5) | 0.0259 (5) | 0.0155 (5) | 0.0055 (4) | 0.0056 (4) | 0.0033 (4) |
| O4 | 0.0183 (5) | 0.0221 (5) | 0.0137 (5) | 0.0017 (4) | 0.0008 (4) | −0.0024 (4) |
| N1 | 0.0156 (5) | 0.0179 (6) | 0.0130 (5) | 0.0010 (4) | 0.0020 (4) | −0.0005 (4) |
| N2 | 0.0193 (6) | 0.0192 (6) | 0.0179 (6) | 0.0021 (5) | 0.0001 (5) | 0.0018 (5) |
| N3 | 0.0372 (8) | 0.0363 (8) | 0.0173 (6) | 0.0003 (6) | 0.0056 (6) | −0.0098 (6) |
| C1 | 0.0194 (6) | 0.0140 (6) | 0.0118 (6) | 0.0035 (5) | 0.0016 (5) | 0.0023 (5) |
| C2 | 0.0200 (7) | 0.0168 (6) | 0.0121 (6) | 0.0016 (5) | 0.0028 (5) | 0.0014 (5) |
| C3 | 0.0207 (7) | 0.0245 (7) | 0.0180 (7) | −0.0003 (6) | 0.0050 (6) | −0.0027 (6) |
| C4 | 0.0243 (8) | 0.0290 (8) | 0.0180 (7) | −0.0020 (6) | 0.0000 (6) | −0.0041 (6) |
| C5 | 0.0319 (8) | 0.0204 (7) | 0.0153 (7) | 0.0009 (6) | 0.0052 (6) | −0.0018 (5) |
| C6 | 0.0248 (7) | 0.0281 (8) | 0.0193 (7) | 0.0007 (6) | 0.0091 (6) | −0.0032 (6) |
| C7 | 0.0205 (7) | 0.0250 (7) | 0.0164 (7) | 0.0002 (6) | 0.0034 (5) | −0.0010 (6) |
| C8 | 0.0185 (7) | 0.0204 (7) | 0.0126 (6) | −0.0010 (5) | 0.0017 (5) | −0.0007 (5) |
| C9 | 0.0235 (7) | 0.0194 (7) | 0.0148 (6) | −0.0003 (5) | 0.0035 (5) | −0.0048 (5) |
| C10 | 0.0213 (7) | 0.0162 (6) | 0.0186 (7) | 0.0025 (5) | 0.0038 (5) | −0.0021 (5) |
| C11 | 0.0150 (6) | 0.0184 (6) | 0.0128 (6) | 0.0001 (5) | 0.0030 (5) | 0.0003 (5) |
| C12 | 0.0153 (6) | 0.0171 (6) | 0.0128 (6) | −0.0001 (5) | 0.0022 (5) | −0.0019 (5) |
| C13 | 0.0204 (7) | 0.0121 (6) | 0.0150 (6) | 0.0019 (5) | 0.0008 (5) | −0.0017 (5) |
| C14 | 0.0182 (7) | 0.0306 (8) | 0.0264 (8) | −0.0030 (6) | 0.0027 (6) | −0.0001 (6) |
| C15 | 0.0240 (8) | 0.0493 (11) | 0.0455 (11) | −0.0045 (8) | 0.0126 (8) | −0.0178 (9) |
| C16 | 0.0257 (8) | 0.0248 (8) | 0.0210 (7) | 0.0051 (6) | −0.0058 (6) | 0.0027 (6) |
| C17 | 0.0355 (9) | 0.0238 (8) | 0.0331 (9) | 0.0070 (7) | 0.0016 (7) | 0.0064 (7) |
| C18 | 0.0487 (11) | 0.0339 (9) | 0.0168 (7) | −0.0074 (8) | 0.0026 (7) | −0.0067 (6) |
| C19 | 0.0560 (12) | 0.0315 (9) | 0.0251 (8) | −0.0078 (8) | 0.0200 (8) | −0.0086 (7) |
| Co1—O1 | 2.0701 (9) | C7—H7 | 0.9500 |
| Co1—O1i | 2.0701 (9) | C8—H8 | 0.9500 |
| Co1—O4 | 2.1209 (10) | C9—C8 | 1.385 (2) |
| Co1—O4i | 2.1209 (10) | C9—C10 | 1.385 (2) |
| Co1—N1 | 2.1519 (11) | C9—H9 | 0.9500 |
| Co1—N1i | 2.1519 (11) | C10—C11 | 1.3934 (18) |
| O1—C1 | 1.2676 (16) | C10—H10 | 0.9500 |
| O2—C1 | 1.2611 (17) | C11—C12 | 1.3863 (19) |
| O3—C13 | 1.2332 (17) | C12—H12 | 0.9500 |
| O4—H41 | 0.908 (13) | C13—C11 | 1.5026 (18) |
| O4—H42 | 0.907 (14) | C14—H14A | 0.9900 |
| N1—C8 | 1.3445 (17) | C14—H14B | 0.9900 |
| N1—C12 | 1.3393 (17) | C15—C14 | 1.519 (2) |
| N2—C13 | 1.3423 (18) | C15—H15A | 0.9800 |
| N2—C14 | 1.4696 (19) | C15—H15B | 0.9800 |
| N2—C16 | 1.4710 (18) | C15—H15C | 0.9800 |
| N3—C5 | 1.3782 (18) | C16—H16A | 0.9900 |
| N3—C18 | 1.446 (2) | C16—H16B | 0.9900 |
| N3—C19 | 1.442 (2) | C17—C16 | 1.518 (2) |
| C2—C1 | 1.4973 (18) | C17—H17A | 0.9800 |
| C3—C2 | 1.392 (2) | C17—H17B | 0.9800 |
| C3—H3 | 0.9500 | C17—H17C | 0.9800 |
| C4—C3 | 1.385 (2) | C18—H18A | 0.9800 |
| C4—C5 | 1.406 (2) | C18—H18B | 0.9800 |
| C4—H4 | 0.9500 | C18—H18C | 0.9800 |
| C6—C7 | 1.383 (2) | C19—H19A | 0.9800 |
| C6—C5 | 1.403 (2) | C19—H19B | 0.9800 |
| C6—H6 | 0.9500 | C19—H19C | 0.9800 |
| C7—C2 | 1.3896 (19) | ||
| O1i—Co1—O1 | 180.0 | C8—C9—C10 | 118.46 (13) |
| O1—Co1—O4 | 89.24 (4) | C8—C9—H9 | 120.8 |
| O1i—Co1—O4 | 90.76 (4) | C10—C9—H9 | 120.8 |
| O1—Co1—O4i | 90.76 (4) | C9—C10—C11 | 119.15 (13) |
| O1i—Co1—O4i | 89.24 (4) | C9—C10—H10 | 120.4 |
| O1—Co1—N1 | 90.78 (4) | C11—C10—H10 | 120.4 |
| O1i—Co1—N1 | 89.22 (4) | C10—C11—C13 | 121.49 (12) |
| O1—Co1—N1i | 89.22 (4) | C12—C11—C10 | 118.47 (12) |
| O1i—Co1—N1i | 90.78 (4) | C12—C11—C13 | 119.79 (12) |
| O4—Co1—O4i | 180.00 (5) | N1—C12—C11 | 122.85 (12) |
| O4—Co1—N1 | 88.07 (4) | N1—C12—H12 | 118.6 |
| O4i—Co1—N1 | 91.93 (4) | C11—C12—H12 | 118.6 |
| O4—Co1—N1i | 91.93 (4) | O3—C13—N2 | 123.31 (13) |
| O4i—Co1—N1i | 88.07 (4) | O3—C13—C11 | 118.90 (12) |
| N1—Co1—N1i | 180.0 | N2—C13—C11 | 117.76 (12) |
| C1—O1—Co1 | 128.10 (9) | N2—C14—C15 | 112.96 (14) |
| Co1—O4—H41 | 98.7 (11) | N2—C14—H14A | 109.0 |
| Co1—O4—H42 | 116.0 (11) | N2—C14—H14B | 109.0 |
| H42—O4—H41 | 106.6 (14) | C15—C14—H14A | 109.0 |
| C8—N1—Co1 | 121.32 (9) | C15—C14—H14B | 109.0 |
| C12—N1—Co1 | 120.62 (9) | H14A—C14—H14B | 107.8 |
| C12—N1—C8 | 118.05 (12) | C14—C15—H15A | 109.5 |
| C13—N2—C14 | 123.91 (12) | C14—C15—H15B | 109.5 |
| C13—N2—C16 | 117.90 (12) | C14—C15—H15C | 109.5 |
| C14—N2—C16 | 118.19 (12) | H15A—C15—H15B | 109.5 |
| C5—N3—C18 | 120.12 (14) | H15A—C15—H15C | 109.5 |
| C5—N3—C19 | 120.00 (14) | H15B—C15—H15C | 109.5 |
| C19—N3—C18 | 118.49 (13) | N2—C16—C17 | 112.39 (13) |
| O1—C1—C2 | 116.77 (12) | N2—C16—H16A | 109.1 |
| O2—C1—O1 | 124.70 (12) | N2—C16—H16B | 109.1 |
| O2—C1—C2 | 118.53 (12) | C17—C16—H16A | 109.1 |
| C3—C2—C1 | 121.19 (12) | C17—C16—H16B | 109.1 |
| C7—C2—C1 | 120.78 (13) | H16A—C16—H16B | 107.9 |
| C7—C2—C3 | 118.01 (13) | C16—C17—H17A | 109.5 |
| C2—C3—H3 | 119.3 | C16—C17—H17B | 109.5 |
| C4—C3—C2 | 121.36 (14) | C16—C17—H17C | 109.5 |
| C4—C3—H3 | 119.3 | H17A—C17—H17B | 109.5 |
| C3—C4—C5 | 120.77 (14) | H17A—C17—H17C | 109.5 |
| C3—C4—H4 | 119.6 | H17B—C17—H17C | 109.5 |
| C5—C4—H4 | 119.6 | N3—C18—H18A | 109.5 |
| N3—C5—C4 | 121.18 (14) | N3—C18—H18B | 109.5 |
| N3—C5—C6 | 121.37 (14) | N3—C18—H18C | 109.5 |
| C6—C5—C4 | 117.44 (13) | H18A—C18—H18B | 109.5 |
| C5—C6—H6 | 119.5 | H18A—C18—H18C | 109.5 |
| C7—C6—C5 | 121.10 (14) | H18B—C18—H18C | 109.5 |
| C7—C6—H6 | 119.5 | N3—C19—H19A | 109.5 |
| C2—C7—H7 | 119.3 | N3—C19—H19B | 109.5 |
| C6—C7—C2 | 121.30 (14) | N3—C19—H19C | 109.5 |
| C6—C7—H7 | 119.4 | H19A—C19—H19B | 109.5 |
| N1—C8—C9 | 123.02 (13) | H19A—C19—H19C | 109.5 |
| N1—C8—H8 | 118.5 | H19B—C19—H19C | 109.5 |
| C9—C8—H8 | 118.5 |
| H··· | ||||
| O4—H41···O2i | 0.91 (2) | 1.78 (2) | 2.6621 (14) | 164 (2) |
| O4—H42···O2ii | 0.91 (2) | 1.90 (2) | 2.7802 (14) | 163 (1) |
| C9—H9···O3iii | 0.95 | 2.41 | 3.3447 (17) | 168 |
| C19—H19A···O3iv | 0.98 | 2.47 | 3.403 (2) | 160 |
| C15—H15A···Cg2v | 0.98 | 2.86 | 3.734 (2) | 148 |
| C18—H18B···Cg1vi | 0.98 | 2.86 | 3.7907 (19) | 158 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O4—H41⋯O2i | 0.908 (16) | 1.777 (15) | 2.6621 (14) | 164.0 (16) |
| O4—H42⋯O2ii | 0.907 (16) | 1.898 (15) | 2.7802 (14) | 163.4 (14) |
| C9—H9⋯O3iii | 0.95 | 2.41 | 3.3447 (17) | 168 |
| C19—H19 | 0.98 | 2.47 | 3.403 (2) | 160 |
| C15—H15 | 0.98 | 2.86 | 3.734 (2) | 148 |
| C18—H18 | 0.98 | 2.86 | 3.7907 (19) | 158 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) ; (vi) . Cg1 and Cg2 are the cetroids of the C2–C7 and N1/C8–C12 rings, respectively.