| Literature DB >> 22412408 |
Iibrahim Göker Zaman, Nagihan Caylak Delibaş, Hacali Necefoğlu, Tuncer Hökelek.
Abstract
The asymmetric unit of the title compound, [Entities:
Year: 2012 PMID: 22412408 PMCID: PMC3297218 DOI: 10.1107/S1600536812003911
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Co(C6H6N2O)2(H2O)4](C7H5O3)2·4H2O | |
| Monoclinic, | Mo |
| Hall symbol: -P 2yn | Cell parameters from 9057 reflections |
| θ = 2.4–28.4° | |
| µ = 0.65 mm−1 | |
| β = 100.194 (3)° | Block, orange |
| 0.29 × 0.28 × 0.14 mm | |
| Bruker Kappa APEXII CCD area-detector diffractometer | 3779 independent reflections |
| Radiation source: fine-focus sealed tube | 3590 reflections with |
| Graphite monochromator | |
| φ and ω scans | θmax = 28.4°, θmin = 2.4° |
| Absorption correction: multi-scan ( | |
| 14243 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 3779 reflections | (Δ/σ)max < 0.001 |
| 258 parameters | Δρmax = 0.47 e Å−3 |
| 16 restraints | Δρmin = −0.42 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Co1 | 0.5000 | 0.0000 | 0.5000 | 0.00895 (12) | |
| O1 | 0.1791 (2) | 0.11648 (9) | 0.83771 (12) | 0.0148 (3) | |
| O2 | 0.0778 (2) | 0.04189 (9) | 0.70323 (12) | 0.0136 (3) | |
| O3 | 0.0160 (3) | 0.39111 (10) | 0.72117 (13) | 0.0160 (3) | |
| H31 | 0.005 (6) | 0.430 (2) | 0.675 (3) | 0.045 (11)* | |
| O4 | 0.6007 (3) | 0.33160 (9) | 0.81945 (12) | 0.0166 (3) | |
| O5 | 0.6814 (2) | 0.04700 (10) | 0.40186 (12) | 0.0141 (3) | |
| H51 | 0.627 (6) | 0.074 (2) | 0.341 (2) | 0.057 (12)* | |
| H52 | 0.759 (5) | 0.0138 (18) | 0.380 (3) | 0.039 (10)* | |
| O6 | 0.2333 (2) | 0.03327 (10) | 0.40967 (13) | 0.0157 (3) | |
| H61 | 0.190 (5) | 0.0815 (12) | 0.378 (3) | 0.039 (10)* | |
| H62 | 0.151 (5) | 0.0013 (15) | 0.381 (3) | 0.039 (10)* | |
| O7 | −0.0014 (3) | 0.51872 (10) | 0.60055 (13) | 0.0168 (3) | |
| H71 | 0.113 (5) | 0.554 (2) | 0.623 (3) | 0.056 (12)* | |
| H72 | −0.006 (10) | 0.516 (4) | 0.541 (2) | 0.13 (3)* | |
| O8 | −0.0938 (3) | 0.06685 (11) | 0.95512 (13) | 0.0195 (4) | |
| H81 | −0.006 (5) | 0.086 (2) | 0.912 (3) | 0.049 (11)* | |
| H82 | −0.200 (6) | 0.054 (4) | 0.917 (4) | 0.16 (3)* | |
| N1 | 0.5124 (3) | 0.11063 (11) | 0.57398 (14) | 0.0107 (3) | |
| N2 | 0.4839 (3) | 0.39703 (12) | 0.67598 (15) | 0.0144 (4) | |
| H21 | 0.473 (5) | 0.441 (2) | 0.705 (2) | 0.023 (8)* | |
| H22 | 0.440 (5) | 0.396 (2) | 0.613 (3) | 0.030 (9)* | |
| C1 | 0.1091 (3) | 0.10798 (13) | 0.74547 (16) | 0.0112 (4) | |
| C2 | 0.0580 (3) | 0.18067 (12) | 0.68279 (16) | 0.0106 (4) | |
| C3 | 0.0646 (3) | 0.25369 (13) | 0.72979 (16) | 0.0118 (4) | |
| H3 | 0.1019 | 0.2575 | 0.7991 | 0.014* | |
| C4 | 0.0151 (3) | 0.32060 (13) | 0.67240 (17) | 0.0122 (4) | |
| C5 | −0.0363 (3) | 0.31556 (13) | 0.56836 (17) | 0.0141 (4) | |
| H5 | −0.0678 | 0.3607 | 0.5302 | 0.017* | |
| C6 | −0.0403 (3) | 0.24293 (14) | 0.52186 (17) | 0.0141 (4) | |
| H6 | −0.0735 | 0.2395 | 0.4523 | 0.017* | |
| C7 | 0.0052 (3) | 0.17518 (13) | 0.57864 (17) | 0.0126 (4) | |
| H7 | 0.0004 | 0.1265 | 0.5473 | 0.015* | |
| C8 | 0.5612 (3) | 0.11620 (13) | 0.67453 (16) | 0.0117 (4) | |
| H8 | 0.5880 | 0.0703 | 0.7117 | 0.014* | |
| C9 | 0.5732 (3) | 0.18675 (13) | 0.72507 (17) | 0.0124 (4) | |
| H9 | 0.6091 | 0.1881 | 0.7946 | 0.015* | |
| C10 | 0.5308 (3) | 0.25590 (12) | 0.67073 (16) | 0.0108 (4) | |
| C11 | 0.4790 (3) | 0.25056 (13) | 0.56688 (17) | 0.0122 (4) | |
| H11 | 0.4491 | 0.2955 | 0.5281 | 0.015* | |
| C12 | 0.4724 (3) | 0.17733 (13) | 0.52206 (16) | 0.0119 (4) | |
| H12 | 0.4386 | 0.1744 | 0.4525 | 0.014* | |
| C13 | 0.5415 (3) | 0.33216 (13) | 0.72758 (17) | 0.0118 (4) |
| Co1 | 0.01097 (19) | 0.0073 (2) | 0.00830 (19) | 0.00020 (14) | 0.00093 (14) | −0.00006 (14) |
| O1 | 0.0186 (8) | 0.0140 (8) | 0.0116 (7) | 0.0004 (6) | 0.0015 (6) | 0.0008 (6) |
| O2 | 0.0155 (7) | 0.0089 (7) | 0.0159 (8) | −0.0015 (6) | 0.0015 (6) | −0.0008 (6) |
| O3 | 0.0239 (8) | 0.0094 (7) | 0.0144 (8) | −0.0002 (6) | 0.0022 (6) | −0.0015 (6) |
| O4 | 0.0260 (9) | 0.0117 (8) | 0.0113 (8) | −0.0024 (6) | 0.0011 (6) | −0.0020 (6) |
| O5 | 0.0170 (8) | 0.0133 (8) | 0.0132 (7) | 0.0007 (6) | 0.0060 (6) | 0.0012 (6) |
| O6 | 0.0159 (8) | 0.0094 (7) | 0.0188 (8) | 0.0001 (6) | −0.0048 (6) | 0.0009 (6) |
| O7 | 0.0196 (8) | 0.0134 (8) | 0.0164 (8) | −0.0028 (6) | 0.0006 (7) | 0.0005 (6) |
| O8 | 0.0235 (9) | 0.0188 (9) | 0.0177 (8) | −0.0023 (7) | 0.0076 (7) | −0.0004 (7) |
| N1 | 0.0102 (8) | 0.0107 (8) | 0.0113 (8) | −0.0007 (6) | 0.0020 (6) | −0.0010 (7) |
| N2 | 0.0211 (9) | 0.0097 (9) | 0.0117 (9) | 0.0005 (7) | 0.0014 (8) | −0.0025 (7) |
| C1 | 0.0091 (9) | 0.0118 (10) | 0.0134 (10) | −0.0006 (7) | 0.0035 (7) | 0.0011 (8) |
| C2 | 0.0094 (9) | 0.0104 (10) | 0.0125 (10) | −0.0010 (7) | 0.0027 (7) | 0.0016 (7) |
| C3 | 0.0119 (9) | 0.0127 (10) | 0.0108 (9) | −0.0021 (7) | 0.0016 (8) | −0.0003 (8) |
| C4 | 0.0110 (9) | 0.0098 (10) | 0.0159 (10) | −0.0008 (7) | 0.0023 (8) | −0.0016 (8) |
| C5 | 0.0145 (10) | 0.0121 (10) | 0.0153 (10) | −0.0012 (8) | 0.0018 (8) | 0.0033 (8) |
| C6 | 0.0145 (10) | 0.0163 (11) | 0.0110 (10) | −0.0013 (8) | 0.0009 (8) | 0.0001 (8) |
| C7 | 0.0125 (9) | 0.0116 (10) | 0.0139 (10) | −0.0021 (7) | 0.0028 (8) | −0.0017 (8) |
| C8 | 0.0132 (9) | 0.0095 (9) | 0.0122 (10) | 0.0000 (7) | 0.0023 (8) | 0.0012 (8) |
| C9 | 0.0127 (9) | 0.0128 (10) | 0.0116 (10) | −0.0006 (8) | 0.0014 (8) | −0.0003 (8) |
| C10 | 0.0094 (9) | 0.0092 (9) | 0.0138 (10) | −0.0011 (7) | 0.0025 (7) | −0.0013 (8) |
| C11 | 0.0136 (9) | 0.0094 (10) | 0.0132 (10) | −0.0008 (7) | 0.0019 (8) | 0.0008 (8) |
| C12 | 0.0129 (9) | 0.0115 (10) | 0.0114 (10) | −0.0012 (7) | 0.0022 (8) | −0.0007 (8) |
| C13 | 0.0120 (9) | 0.0108 (10) | 0.0132 (10) | −0.0026 (7) | 0.0039 (8) | −0.0019 (8) |
| Co1—O5 | 2.1118 (16) | N2—H21 | 0.85 (3) |
| Co1—O5i | 2.1118 (16) | N2—H22 | 0.85 (4) |
| Co1—O6 | 2.0593 (16) | C2—C1 | 1.507 (3) |
| Co1—O6i | 2.0593 (16) | C2—C3 | 1.396 (3) |
| Co1—N1 | 2.1306 (18) | C2—C7 | 1.395 (3) |
| Co1—N1i | 2.1306 (18) | C3—H3 | 0.9300 |
| O1—C1 | 1.262 (3) | C4—C3 | 1.387 (3) |
| O2—C1 | 1.264 (3) | C5—C4 | 1.392 (3) |
| O3—C4 | 1.371 (3) | C5—C6 | 1.388 (3) |
| O3—H31 | 0.91 (4) | C5—H5 | 0.9300 |
| O4—C13 | 1.237 (3) | C6—H6 | 0.9300 |
| O5—H51 | 0.963 (18) | C7—C6 | 1.391 (3) |
| O5—H52 | 0.85 (2) | C7—H7 | 0.9300 |
| O6—H61 | 0.948 (17) | C8—C9 | 1.379 (3) |
| O6—H62 | 0.82 (2) | C8—H8 | 0.9300 |
| O7—H71 | 0.978 (18) | C9—C10 | 1.392 (3) |
| O7—H72 | 0.81 (2) | C9—H9 | 0.9300 |
| O8—H81 | 0.960 (18) | C11—C10 | 1.390 (3) |
| O8—H82 | 0.83 (3) | C11—C12 | 1.386 (3) |
| N1—C8 | 1.346 (3) | C11—H11 | 0.9300 |
| N1—C12 | 1.339 (3) | C12—H12 | 0.9300 |
| N2—C13 | 1.328 (3) | C13—C10 | 1.506 (3) |
| O5i—Co1—O5 | 180.0 | C7—C2—C3 | 120.2 (2) |
| O5—Co1—N1 | 88.91 (7) | C2—C3—H3 | 120.2 |
| O5—Co1—N1i | 91.09 (7) | C4—C3—C2 | 119.6 (2) |
| O5i—Co1—N1 | 91.09 (7) | C4—C3—H3 | 120.2 |
| O5i—Co1—N1i | 88.91 (7) | O3—C4—C3 | 118.1 (2) |
| O6—Co1—O5 | 93.32 (7) | O3—C4—C5 | 121.4 (2) |
| O6—Co1—O5i | 86.68 (7) | C3—C4—C5 | 120.5 (2) |
| O6i—Co1—O5i | 93.32 (7) | C4—C5—H5 | 120.1 |
| O6i—Co1—O5 | 86.68 (7) | C6—C5—C4 | 119.7 (2) |
| O6—Co1—O6i | 180.0 | C6—C5—H5 | 120.1 |
| O6—Co1—N1 | 89.59 (7) | C5—C6—C7 | 120.4 (2) |
| O6i—Co1—N1 | 90.41 (7) | C5—C6—H6 | 119.8 |
| O6—Co1—N1i | 90.41 (7) | C7—C6—H6 | 119.8 |
| O6i—Co1—N1i | 89.59 (7) | C2—C7—H7 | 120.2 |
| N1i—Co1—N1 | 180.0 | C6—C7—C2 | 119.6 (2) |
| C4—O3—H31 | 108 (2) | C6—C7—H7 | 120.2 |
| Co1—O5—H51 | 123 (2) | N1—C8—C9 | 123.1 (2) |
| Co1—O5—H52 | 115 (2) | N1—C8—H8 | 118.5 |
| H52—O5—H51 | 101 (3) | C9—C8—H8 | 118.5 |
| Co1—O6—H61 | 132 (2) | C8—C9—C10 | 119.2 (2) |
| Co1—O6—H62 | 123 (2) | C8—C9—H9 | 120.4 |
| H62—O6—H61 | 104 (2) | C10—C9—H9 | 120.4 |
| H71—O7—H72 | 104 (3) | C9—C10—C13 | 118.31 (19) |
| H81—O8—H82 | 105 (3) | C11—C10—C9 | 118.0 (2) |
| C8—N1—Co1 | 121.36 (14) | C11—C10—C13 | 123.65 (19) |
| C12—N1—Co1 | 121.18 (14) | C10—C11—H11 | 120.5 |
| C12—N1—C8 | 117.46 (19) | C12—C11—C10 | 119.0 (2) |
| C13—N2—H21 | 122 (2) | C12—C11—H11 | 120.5 |
| C13—N2—H22 | 121 (2) | N1—C12—C11 | 123.2 (2) |
| H21—N2—H22 | 116 (3) | N1—C12—H12 | 118.4 |
| O1—C1—O2 | 123.5 (2) | C11—C12—H12 | 118.4 |
| O1—C1—C2 | 118.07 (19) | O4—C13—N2 | 123.2 (2) |
| O2—C1—C2 | 118.38 (19) | O4—C13—C10 | 119.00 (19) |
| C3—C2—C1 | 119.43 (19) | N2—C13—C10 | 117.83 (19) |
| C7—C2—C1 | 120.39 (19) | ||
| O5—Co1—N1—C8 | −130.62 (16) | C1—C2—C7—C6 | −179.56 (19) |
| O5i—Co1—N1—C8 | 49.38 (16) | C3—C2—C7—C6 | 0.2 (3) |
| O5—Co1—N1—C12 | 49.21 (16) | O3—C4—C3—C2 | 177.66 (19) |
| O5i—Co1—N1—C12 | −130.79 (16) | C5—C4—C3—C2 | −1.5 (3) |
| O6—Co1—N1—C8 | 136.06 (16) | C6—C5—C4—O3 | −178.4 (2) |
| O6i—Co1—N1—C8 | −43.94 (16) | C6—C5—C4—C3 | 0.7 (3) |
| O6—Co1—N1—C12 | −44.12 (16) | C4—C5—C6—C7 | 0.5 (3) |
| O6i—Co1—N1—C12 | 135.88 (16) | C2—C7—C6—C5 | −1.0 (3) |
| Co1—N1—C8—C9 | 179.20 (16) | N1—C8—C9—C10 | 0.8 (3) |
| C12—N1—C8—C9 | −0.6 (3) | C8—C9—C10—C11 | −0.4 (3) |
| Co1—N1—C12—C11 | −179.88 (16) | C8—C9—C10—C13 | 178.98 (19) |
| C8—N1—C12—C11 | 0.0 (3) | C12—C11—C10—C9 | −0.3 (3) |
| C3—C2—C1—O1 | −8.0 (3) | C12—C11—C10—C13 | −179.57 (19) |
| C3—C2—C1—O2 | 171.26 (19) | C10—C11—C12—N1 | 0.5 (3) |
| C7—C2—C1—O1 | 171.73 (19) | O4—C13—C10—C9 | 5.0 (3) |
| C7—C2—C1—O2 | −9.0 (3) | O4—C13—C10—C11 | −175.7 (2) |
| C1—C2—C3—C4 | −179.20 (19) | N2—C13—C10—C9 | −174.3 (2) |
| C7—C2—C3—C4 | 1.1 (3) | N2—C13—C10—C11 | 5.0 (3) |
| H··· | ||||
| N2—H21···O2ii | 0.86 (3) | 2.18 (3) | 3.031 (3) | 170 (3) |
| N2—H22···O8iii | 0.85 (4) | 2.20 (4) | 3.007 (3) | 158 (3) |
| O3—H31···O7 | 0.91 (4) | 1.81 (4) | 2.711 (2) | 170 (4) |
| O5—H51···O3iii | 0.96 (3) | 1.76 (3) | 2.715 (2) | 171 (3) |
| O5—H52···O2i | 0.86 (3) | 1.95 (4) | 2.782 (2) | 163 (4) |
| O6—H61···O4iv | 0.95 (3) | 1.73 (3) | 2.685 (2) | 178 (4) |
| O6—H62···O2v | 0.82 (3) | 1.89 (4) | 2.683 (2) | 161 (3) |
| O7—H71···O1ii | 0.98 (3) | 1.76 (4) | 2.740 (3) | 179 (3) |
| O8—H81···O1 | 0.96 (4) | 1.81 (4) | 2.760 (3) | 174 (3) |
| O8—H82···O7vi | 0.83 (5) | 2.06 (4) | 2.807 (3) | 149 (5) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N2—H21⋯O2i | 0.86 (3) | 2.18 (3) | 3.031 (3) | 170 (3) |
| N2—H22⋯O8ii | 0.85 (4) | 2.20 (4) | 3.007 (3) | 158 (3) |
| O3—H31⋯O7 | 0.91 (4) | 1.81 (4) | 2.711 (2) | 170 (4) |
| O5—H51⋯O3ii | 0.96 (3) | 1.76 (3) | 2.715 (2) | 171 (3) |
| O5—H52⋯O2iii | 0.86 (3) | 1.95 (4) | 2.782 (2) | 163 (4) |
| O6—H61⋯O4iv | 0.95 (3) | 1.73 (3) | 2.685 (2) | 178 (4) |
| O6—H62⋯O2v | 0.82 (3) | 1.89 (4) | 2.683 (2) | 161 (3) |
| O7—H71⋯O1i | 0.98 (3) | 1.76 (4) | 2.740 (3) | 179 (3) |
| O8—H81⋯O1 | 0.96 (4) | 1.81 (4) | 2.760 (3) | 174 (3) |
| O8—H82⋯O7vi | 0.83 (5) | 2.06 (4) | 2.807 (3) | 149 (5) |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) ; (vi) .