| Literature DB >> 21580476 |
Hacali Necefoğlu, Efdal Cimen, Barış Tercan, Emel Ermiş, Tuncer Hökelek.
Abstract
The title Ni(II) complex, [Ni(C(8)H(7)O(2))(2)(C(6)H(6)N(2)O)(2)(H(2)O)(2)], is centrosymmetric with the Ni atom located on an inversion center. The mol-ecule contains two 4-methyl-benzoate (PMB) and two nicotinamide (NA) ligands and two coordinated water mol-ecules, all ligands being monodentate. The four O atoms in the equatorial plane around the Ni atom form a slightly distorted square-planar arrangement, while the slightly distorted octa-hedral coordination is completed by the two N atoms of the NA ligands in the axial positions. The dihedral angle between the carboxyl-ate group and the adjacent benzene ring is 26.15 (10)°, while the pyridine and benzene rings are oriented at a dihedral angle of 87.81 (4)°. In the crystal structure, inter-molecular O-H⋯O and N-H⋯O hydrogen bonds link the mol-ecules into a three-dimensional network. The π-π contact between the benzene rings [centroid-centroid distance = 3.896 (1) Å] may further stabilize the crystal structure. A weak C-H⋯π inter-action involving the pyridine ring also occurs.Entities:
Year: 2010 PMID: 21580476 PMCID: PMC2984063 DOI: 10.1107/S1600536810007385
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Ni(C8H7O2)2(C6H6N2O)2(H2O)2] | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 6458 reflections | |
| θ = 2.8–28.3° | |
| µ = 0.76 mm−1 | |
| α = 78.440 (2)° | |
| β = 86.475 (3)° | Prism, blue |
| γ = 71.662 (2)° | 0.33 × 0.28 × 0.25 mm |
| Bruker Kappa APEXII CCD area-detector diffractometer | 3390 independent reflections |
| Radiation source: fine-focus sealed tube | 3034 reflections with |
| graphite | |
| φ and ω scans | θmax = 28.4°, θmin = 2.1° |
| Absorption correction: multi-scan ( | |
| 12002 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 3390 reflections | (Δ/σ)max < 0.001 |
| 204 parameters | Δρmax = 0.48 e Å−3 |
| 0 restraints | Δρmin = −0.50 e Å−3 |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of |
| Ni1 | 0.0000 | 0.0000 | 0.5000 | 0.00996 (8) | |
| O1 | 0.12751 (13) | 0.01072 (11) | 0.67419 (11) | 0.0129 (2) | |
| O2 | −0.11125 (14) | 0.15789 (11) | 0.77116 (11) | 0.0149 (2) | |
| O3 | 0.44171 (14) | 0.33247 (11) | 0.48634 (12) | 0.0177 (2) | |
| O4 | 0.25984 (15) | −0.07089 (12) | 0.41538 (12) | 0.0136 (2) | |
| H41 | 0.342 (3) | −0.137 (2) | 0.458 (2) | 0.034 (6)* | |
| H42 | 0.228 (3) | −0.103 (2) | 0.345 (2) | 0.036 (6)* | |
| N1 | −0.00159 (16) | 0.21391 (13) | 0.41144 (13) | 0.0116 (2) | |
| N2 | 0.33786 (19) | 0.55995 (15) | 0.35530 (15) | 0.0176 (3) | |
| H21 | 0.252 (3) | 0.628 (2) | 0.307 (2) | 0.022 (5)* | |
| H22 | 0.425 (3) | 0.586 (2) | 0.390 (2) | 0.024 (5)* | |
| C1 | 0.05766 (19) | 0.09453 (16) | 0.75988 (15) | 0.0120 (3) | |
| C2 | 0.18258 (19) | 0.12691 (15) | 0.85126 (15) | 0.0121 (3) | |
| C3 | 0.3601 (2) | 0.12032 (16) | 0.81040 (16) | 0.0139 (3) | |
| H3 | 0.4070 | 0.0851 | 0.7302 | 0.017* | |
| C4 | 0.4678 (2) | 0.16598 (16) | 0.88863 (16) | 0.0153 (3) | |
| H4 | 0.5855 | 0.1624 | 0.8593 | 0.018* | |
| C5 | 0.4019 (2) | 0.21690 (17) | 1.00998 (17) | 0.0162 (3) | |
| C6 | 0.2262 (2) | 0.21841 (18) | 1.05279 (17) | 0.0192 (3) | |
| H6 | 0.1816 | 0.2488 | 1.1356 | 0.023* | |
| C7 | 0.1171 (2) | 0.17547 (17) | 0.97424 (16) | 0.0164 (3) | |
| H7 | −0.0006 | 0.1790 | 1.0037 | 0.020* | |
| C8 | 0.5187 (2) | 0.26752 (19) | 1.09414 (19) | 0.0239 (4) | |
| H8A | 0.4556 | 0.3664 | 1.1063 | 0.036* | |
| H8B | 0.6314 | 0.2651 | 1.0463 | 0.036* | |
| H8C | 0.5435 | 0.2033 | 1.1834 | 0.036* | |
| C9 | −0.13817 (19) | 0.31071 (16) | 0.33131 (16) | 0.0140 (3) | |
| H9 | −0.2385 | 0.2823 | 0.3163 | 0.017* | |
| C10 | −0.1356 (2) | 0.45107 (17) | 0.27015 (17) | 0.0169 (3) | |
| H10 | −0.2326 | 0.5157 | 0.2153 | 0.020* | |
| C11 | 0.0139 (2) | 0.49377 (16) | 0.29208 (16) | 0.0156 (3) | |
| H11 | 0.0188 | 0.5875 | 0.2521 | 0.019* | |
| C12 | 0.15612 (19) | 0.39452 (16) | 0.37462 (15) | 0.0121 (3) | |
| C13 | 0.14248 (19) | 0.25568 (16) | 0.43189 (15) | 0.0115 (3) | |
| H13 | 0.2378 | 0.1888 | 0.4869 | 0.014* | |
| C14 | 0.32352 (19) | 0.42736 (16) | 0.40920 (16) | 0.0131 (3) |
| Ni1 | 0.00972 (13) | 0.00810 (13) | 0.01255 (14) | −0.00273 (10) | −0.00152 (9) | −0.00267 (10) |
| O1 | 0.0132 (5) | 0.0108 (5) | 0.0144 (5) | −0.0023 (4) | −0.0020 (4) | −0.0036 (4) |
| O2 | 0.0120 (5) | 0.0152 (5) | 0.0175 (6) | −0.0027 (4) | −0.0015 (4) | −0.0050 (4) |
| O3 | 0.0162 (5) | 0.0107 (5) | 0.0257 (6) | −0.0035 (4) | −0.0068 (4) | −0.0016 (5) |
| O4 | 0.0114 (5) | 0.0124 (5) | 0.0163 (6) | −0.0018 (4) | −0.0020 (4) | −0.0038 (5) |
| N1 | 0.0122 (6) | 0.0100 (6) | 0.0128 (6) | −0.0029 (5) | −0.0008 (5) | −0.0035 (5) |
| N2 | 0.0172 (7) | 0.0113 (6) | 0.0254 (8) | −0.0066 (5) | −0.0074 (6) | −0.0003 (6) |
| C1 | 0.0134 (7) | 0.0098 (7) | 0.0124 (7) | −0.0044 (5) | −0.0023 (5) | 0.0010 (5) |
| C2 | 0.0132 (7) | 0.0087 (6) | 0.0133 (7) | −0.0021 (5) | −0.0032 (5) | −0.0007 (5) |
| C3 | 0.0157 (7) | 0.0130 (7) | 0.0124 (7) | −0.0033 (6) | −0.0010 (5) | −0.0028 (6) |
| C4 | 0.0135 (7) | 0.0139 (7) | 0.0179 (8) | −0.0040 (6) | −0.0021 (6) | −0.0014 (6) |
| C5 | 0.0180 (7) | 0.0116 (7) | 0.0182 (8) | −0.0024 (6) | −0.0062 (6) | −0.0027 (6) |
| C6 | 0.0193 (8) | 0.0224 (8) | 0.0162 (8) | −0.0028 (6) | −0.0002 (6) | −0.0101 (7) |
| C7 | 0.0132 (7) | 0.0185 (8) | 0.0167 (8) | −0.0030 (6) | −0.0003 (6) | −0.0046 (6) |
| C8 | 0.0219 (8) | 0.0243 (9) | 0.0285 (10) | −0.0062 (7) | −0.0070 (7) | −0.0111 (7) |
| C9 | 0.0116 (7) | 0.0140 (7) | 0.0173 (8) | −0.0039 (6) | −0.0022 (6) | −0.0045 (6) |
| C10 | 0.0146 (7) | 0.0126 (7) | 0.0207 (8) | −0.0008 (6) | −0.0058 (6) | −0.0003 (6) |
| C11 | 0.0173 (7) | 0.0092 (7) | 0.0199 (8) | −0.0040 (6) | −0.0024 (6) | −0.0013 (6) |
| C12 | 0.0129 (7) | 0.0102 (7) | 0.0138 (7) | −0.0028 (5) | −0.0005 (5) | −0.0050 (6) |
| C13 | 0.0122 (6) | 0.0103 (7) | 0.0120 (7) | −0.0025 (5) | −0.0019 (5) | −0.0030 (5) |
| C14 | 0.0141 (7) | 0.0118 (7) | 0.0142 (7) | −0.0032 (6) | 0.0000 (5) | −0.0053 (6) |
| Ni1—O1 | 2.0621 (10) | C4—C5 | 1.389 (2) |
| Ni1—O1i | 2.0621 (10) | C4—H4 | 0.9300 |
| Ni1—O4i | 2.0870 (10) | C5—C6 | 1.394 (2) |
| Ni1—O4 | 2.0870 (10) | C5—C8 | 1.509 (2) |
| Ni1—N1 | 2.0859 (12) | C6—H6 | 0.9300 |
| Ni1—N1i | 2.0859 (12) | C7—C2 | 1.393 (2) |
| O1—C1 | 1.2678 (17) | C7—C6 | 1.383 (2) |
| O2—C1 | 1.2654 (17) | C7—H7 | 0.9300 |
| O3—C14 | 1.2392 (18) | C8—H8A | 0.9600 |
| O4—H41 | 0.81 (2) | C8—H8B | 0.9600 |
| O4—H42 | 0.88 (2) | C8—H8C | 0.9600 |
| N1—C9 | 1.3421 (19) | C9—C10 | 1.383 (2) |
| N1—C13 | 1.3386 (18) | C9—H9 | 0.9300 |
| N2—C14 | 1.3294 (19) | C10—H10 | 0.9300 |
| N2—H21 | 0.86 (2) | C11—C10 | 1.388 (2) |
| N2—H22 | 0.89 (2) | C11—H11 | 0.9300 |
| C1—C2 | 1.500 (2) | C12—C11 | 1.388 (2) |
| C2—C3 | 1.392 (2) | C12—C13 | 1.390 (2) |
| C3—H3 | 0.9300 | C13—H13 | 0.9300 |
| C4—C3 | 1.389 (2) | C14—C12 | 1.500 (2) |
| O1i—Ni1—O1 | 180.0 | C5—C4—C3 | 120.87 (14) |
| O1—Ni1—O4 | 86.71 (4) | C5—C4—H4 | 119.6 |
| O1i—Ni1—O4 | 93.29 (4) | C4—C5—C6 | 118.33 (14) |
| O1—Ni1—O4i | 93.29 (4) | C4—C5—C8 | 120.73 (14) |
| O1i—Ni1—O4i | 86.71 (4) | C6—C5—C8 | 120.93 (14) |
| O1—Ni1—N1 | 89.94 (4) | C5—C6—H6 | 119.4 |
| O1i—Ni1—N1 | 90.06 (4) | C7—C6—C5 | 121.11 (14) |
| O1—Ni1—N1i | 90.06 (4) | C7—C6—H6 | 119.4 |
| O1i—Ni1—N1i | 89.94 (4) | C2—C7—H7 | 119.8 |
| O4i—Ni1—O4 | 180.0 | C6—C7—C2 | 120.34 (14) |
| N1—Ni1—O4 | 86.75 (4) | C6—C7—H7 | 119.8 |
| N1i—Ni1—O4 | 93.25 (4) | C5—C8—H8A | 109.5 |
| N1—Ni1—O4i | 93.25 (4) | C5—C8—H8B | 109.5 |
| N1i—Ni1—O4i | 86.75 (4) | C5—C8—H8C | 109.5 |
| N1i—Ni1—N1 | 180.0 | H8A—C8—H8B | 109.5 |
| C1—O1—Ni1 | 125.51 (9) | H8A—C8—H8C | 109.5 |
| Ni1—O4—H41 | 122.0 (15) | H8B—C8—H8C | 109.5 |
| Ni1—O4—H42 | 97.1 (14) | N1—C9—C10 | 122.60 (14) |
| H42—O4—H41 | 108 (2) | N1—C9—H9 | 118.7 |
| C9—N1—Ni1 | 123.09 (10) | C10—C9—H9 | 118.7 |
| C13—N1—Ni1 | 118.67 (10) | C9—C10—C11 | 118.88 (14) |
| C13—N1—C9 | 118.21 (12) | C9—C10—H10 | 120.6 |
| C14—N2—H21 | 122.3 (13) | C11—C10—H10 | 120.6 |
| C14—N2—H22 | 117.1 (12) | C10—C11—C12 | 119.04 (14) |
| H21—N2—H22 | 118.3 (18) | C10—C11—H11 | 120.5 |
| O1—C1—C2 | 118.42 (13) | C12—C11—H11 | 120.5 |
| O2—C1—O1 | 124.67 (14) | C11—C12—C13 | 118.29 (13) |
| O2—C1—C2 | 116.86 (13) | C11—C12—C14 | 124.54 (13) |
| C3—C2—C1 | 121.08 (13) | C13—C12—C14 | 117.16 (13) |
| C3—C2—C7 | 118.83 (14) | N1—C13—C12 | 122.98 (13) |
| C7—C2—C1 | 119.91 (13) | N1—C13—H13 | 118.5 |
| C2—C3—H3 | 119.8 | C12—C13—H13 | 118.5 |
| C4—C3—C2 | 120.46 (14) | O3—C14—N2 | 122.43 (14) |
| C4—C3—H3 | 119.8 | O3—C14—C12 | 119.86 (13) |
| C3—C4—H4 | 119.6 | N2—C14—C12 | 117.70 (13) |
| O4—Ni1—O1—C1 | 153.43 (11) | O2—C1—C2—C7 | 23.4 (2) |
| O4i—Ni1—O1—C1 | −26.57 (11) | C1—C2—C3—C4 | 172.95 (13) |
| N1—Ni1—O1—C1 | 66.68 (11) | C7—C2—C3—C4 | −2.1 (2) |
| N1i—Ni1—O1—C1 | −113.32 (11) | C5—C4—C3—C2 | 1.0 (2) |
| O1—Ni1—N1—C9 | −144.39 (11) | C3—C4—C5—C6 | 1.2 (2) |
| O1i—Ni1—N1—C9 | 35.61 (11) | C3—C4—C5—C8 | −179.53 (14) |
| O1—Ni1—N1—C13 | 37.62 (11) | C4—C5—C6—C7 | −2.3 (2) |
| O1i—Ni1—N1—C13 | −142.38 (11) | C8—C5—C6—C7 | 178.42 (15) |
| O4—Ni1—N1—C9 | 128.90 (12) | C6—C7—C2—C1 | −174.10 (14) |
| O4i—Ni1—N1—C9 | −51.10 (12) | C6—C7—C2—C3 | 1.0 (2) |
| O4—Ni1—N1—C13 | −49.10 (11) | C2—C7—C6—C5 | 1.2 (2) |
| O4i—Ni1—N1—C13 | 130.90 (11) | N1—C9—C10—C11 | 0.1 (2) |
| Ni1—O1—C1—O2 | 17.6 (2) | C12—C11—C10—C9 | 0.0 (2) |
| Ni1—O1—C1—C2 | −159.77 (9) | C13—C12—C11—C10 | 0.1 (2) |
| Ni1—N1—C9—C10 | −178.28 (11) | C14—C12—C11—C10 | −178.64 (14) |
| C13—N1—C9—C10 | −0.3 (2) | C11—C12—C13—N1 | −0.3 (2) |
| Ni1—N1—C13—C12 | 178.46 (11) | C14—C12—C13—N1 | 178.56 (13) |
| C9—N1—C13—C12 | 0.4 (2) | O3—C14—C12—C11 | 178.48 (14) |
| O1—C1—C2—C3 | 26.1 (2) | O3—C14—C12—C13 | −0.3 (2) |
| O1—C1—C2—C7 | −158.94 (14) | N2—C14—C12—C11 | −1.1 (2) |
| O2—C1—C2—C3 | −151.54 (14) | N2—C14—C12—C13 | −179.83 (13) |
| Cg2 is the centroid of the N1/C9–C13 ring. |
| H··· | ||||
| N2—H21···O2ii | 0.86 (2) | 2.037 (19) | 2.8333 (18) | 153.4 (19) |
| N2—H22···O3iii | 0.90 (2) | 2.05 (2) | 2.9192 (19) | 161.5 (18) |
| O4—H41···O3iv | 0.81 (2) | 2.10 (2) | 2.8864 (16) | 162.9 (19) |
| O4—H42···O2i | 0.89 (2) | 1.75 (2) | 2.6240 (16) | 165 (2) |
| C6—H6···Cg2v | 0.93 | 2.65 | 3.5737 (18) | 171 |
Selected bond lengths (Å)
| Ni1—O1 | 2.0621 (10) |
| Ni1—O4 | 2.0870 (10) |
| Ni1—N1 | 2.0859 (12) |
Hydrogen-bond geometry (Å, °)
Cg2 is the centroid of the N1/C9–C13 ring.
| H⋯ | ||||
|---|---|---|---|---|
| N2—H21⋯O2i | 0.86 (2) | 2.037 (19) | 2.8333 (18) | 153.4 (19) |
| N2—H22⋯O3ii | 0.90 (2) | 2.05 (2) | 2.9192 (19) | 161.5 (18) |
| O4—H41⋯O3iii | 0.81 (2) | 2.10 (2) | 2.8864 (16) | 162.9 (19) |
| O4—H42⋯O2iv | 0.89 (2) | 1.75 (2) | 2.6240 (16) | 165 (2) |
| C6—H6⋯ | 0.93 | 2.65 | 3.5737 (18) | 171 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) .