Literature DB >> 21580438

7-Chloro-4-[(E)-2-(2-methoxy-benzyl-idene)hydrazin-1-yl]quinoline monohydrate.

Marcus V N de Souza, R Alan Howie, Edward R T Tiekink, James L Wardell, Solange M S V Wardell, Carlos R Kaiser.   

Abstract

In the title hydrate, C(17)H(14)ClN(3)O·H(2)O, the dihedral angle between the quinoline fused-ring system and the benzene ring is 13.4 (2)° and the conformation about the C=N bond is E. In the crystal, N(h)-H⋯O(w) and O(w)-H⋯N(q) (h = hydro-zone, w = water and q = quinoline) hydrogen bonds generate a two-dimenstional network in the ac plane. A weak C-H⋯O inter-action helps to consolidate the packing.

Entities:  

Year:  2010        PMID: 21580438      PMCID: PMC2983501          DOI: 10.1107/S1600536810006586

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to the pharmacological activity of quinoline derivatives, see: Warshakoon et al. (2006 ▶). For recent studies into quinoline-based anti-malarials, see: Andrade et al. (2007 ▶); de Souza et al. (2005 ▶). For related structures, see: Kaiser et al. (2009 ▶); de Souza et al. (2009 ▶, 2010 ▶). For the structure of the isomeric 2-meth­oxy structure, see: de Lima Ferreira et al. (2010 ▶).

Experimental

Crystal data

C17H14ClN3O·H2O M = 329.78 Monoclinic, a = 3.9202 (2) Å b = 24.5084 (17) Å c = 16.1212 (11) Å β = 91.639 (4)° V = 1548.26 (17) Å3 Z = 4 Mo Kα radiation μ = 0.26 mm−1 T = 120 K 0.62 × 0.03 × 0.02 mm

Data collection

Nonius KappaCCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 2007 ▶) T min = 0.735, T max = 0.995 11507 measured reflections 2716 independent reflections 1769 reflections with I > 2σ(I) R int = 0.096

Refinement

R[F 2 > 2σ(F 2)] = 0.093 wR(F 2) = 0.260 S = 1.04 2716 reflections 215 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.40 e Å−3 Δρmin = −0.45 e Å−3 Data collection: COLLECT (Hooft, 1998 ▶); cell refinement: DENZO (Otwinowski & Minor, 1997 ▶) and COLLECT; data reduction: DENZO and COLLECT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and DIAMOND (Brandenburg, 2006 ▶); software used to prepare material for publication: publCIF (Westrip, 2010 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810006586/hb5340sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810006586/hb5340Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C17H14ClN3O·H2OF(000) = 688
Mr = 329.78Dx = 1.415 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 9260 reflections
a = 3.9202 (2) Åθ = 2.9–27.5°
b = 24.5084 (17) ŵ = 0.26 mm1
c = 16.1212 (11) ÅT = 120 K
β = 91.639 (4)°Needle, colourless
V = 1548.26 (17) Å30.62 × 0.03 × 0.02 mm
Z = 4
Nonius KappaCCD diffractometer2716 independent reflections
Radiation source: Enraf Nonius FR591 rotating anode1769 reflections with I > 2σ(I)
10 cm confocal mirrorsRint = 0.096
Detector resolution: 9.091 pixels mm-1θmax = 25.0°, θmin = 3.0°
φ and ω scansh = −4→4
Absorption correction: multi-scan (SADABS; Sheldrick, 2007)k = −29→29
Tmin = 0.735, Tmax = 0.995l = −19→19
11507 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.093Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.260H atoms treated by a mixture of independent and constrained refinement
S = 1.04w = 1/[σ2(Fo2) + (0.1P)2 + 10.4045P] where P = (Fo2 + 2Fc2)/3
2716 reflections(Δ/σ)max = 0.001
215 parametersΔρmax = 0.40 e Å3
0 restraintsΔρmin = −0.45 e Å3
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl10.0208 (4)0.57108 (6)0.05313 (10)0.0256 (5)
O11.3298 (11)0.93299 (18)0.2940 (3)0.0232 (10)
N10.1966 (13)0.7497 (2)−0.0985 (3)0.0201 (12)
N20.6619 (13)0.8261 (2)0.1080 (3)0.0214 (12)
H2N0.69680.80800.15470.026*
N30.7680 (12)0.8795 (2)0.1015 (3)0.0195 (12)
C10.2920 (16)0.8018 (3)−0.0989 (4)0.0232 (15)
H10.25040.8220−0.14840.028*
C20.4479 (15)0.8288 (2)−0.0322 (4)0.0183 (13)
H20.51570.8658−0.03770.022*
C30.5046 (15)0.8016 (2)0.0426 (4)0.0203 (14)
C40.3926 (15)0.7459 (2)0.0470 (4)0.0176 (13)
C50.4234 (15)0.7141 (3)0.1204 (4)0.0223 (14)
H50.52400.72960.16920.027*
C60.3094 (16)0.6611 (2)0.1217 (4)0.0206 (14)
H60.32930.64020.17120.025*
C70.1640 (15)0.6384 (2)0.0496 (4)0.0176 (13)
C80.1307 (16)0.6672 (3)−0.0225 (4)0.0213 (14)
H80.03290.6504−0.07070.026*
C90.2419 (15)0.7222 (2)−0.0257 (4)0.0180 (13)
C100.9303 (15)0.8980 (3)0.1657 (4)0.0211 (14)
H100.97740.87450.21150.025*
C111.0442 (14)0.9551 (2)0.1693 (4)0.0164 (13)
C121.2380 (14)0.9726 (2)0.2387 (4)0.0181 (14)
C131.3295 (16)1.0271 (3)0.2466 (4)0.0237 (15)
H131.45961.03910.29380.028*
C141.2299 (16)1.0641 (3)0.1851 (4)0.0222 (14)
H141.29081.10140.19090.027*
C151.0422 (16)1.0471 (3)0.1152 (4)0.0249 (15)
H150.97781.07250.07310.030*
C160.9495 (15)0.9922 (2)0.1078 (4)0.0212 (14)
H160.82110.98020.06040.025*
C171.5235 (16)0.9495 (3)0.3666 (4)0.0242 (15)
H17A1.74390.96420.35010.036*
H17B1.56130.91790.40300.036*
H17C1.39760.97770.39620.036*
O1W0.7223 (14)0.7893 (2)0.2807 (3)0.0304 (12)
H1W0.53 (2)0.785 (3)0.300 (5)0.046*
H2W0.89 (2)0.780 (3)0.309 (5)0.046*
U11U22U33U12U13U23
Cl10.0319 (9)0.0186 (8)0.0263 (9)−0.0044 (7)−0.0002 (7)0.0044 (7)
O10.028 (2)0.023 (2)0.018 (2)0.0005 (19)−0.0047 (18)−0.001 (2)
N10.027 (3)0.019 (3)0.015 (3)−0.002 (2)−0.003 (2)0.002 (2)
N20.027 (3)0.020 (3)0.017 (3)−0.002 (2)−0.003 (2)0.002 (2)
N30.022 (3)0.015 (3)0.022 (3)−0.002 (2)0.004 (2)−0.002 (2)
C10.026 (3)0.026 (4)0.017 (4)0.000 (3)−0.005 (3)0.008 (3)
C20.023 (3)0.015 (3)0.017 (3)−0.001 (2)0.004 (3)−0.004 (3)
C30.018 (3)0.020 (3)0.022 (4)0.002 (3)−0.003 (3)−0.004 (3)
C40.016 (3)0.020 (3)0.017 (3)0.001 (2)0.005 (2)0.001 (3)
C50.023 (3)0.025 (3)0.019 (4)0.002 (3)−0.002 (3)0.000 (3)
C60.029 (3)0.015 (3)0.018 (4)0.002 (3)0.001 (3)−0.001 (3)
C70.019 (3)0.017 (3)0.018 (3)0.002 (2)0.008 (2)−0.002 (3)
C80.023 (3)0.024 (3)0.017 (4)−0.004 (3)−0.004 (3)−0.001 (3)
C90.023 (3)0.016 (3)0.015 (3)0.000 (2)−0.002 (3)−0.002 (3)
C100.019 (3)0.021 (3)0.023 (4)0.001 (3)0.002 (3)0.005 (3)
C110.014 (3)0.016 (3)0.018 (3)−0.004 (2)0.001 (2)−0.003 (3)
C120.014 (3)0.019 (3)0.022 (4)0.001 (2)0.006 (2)−0.004 (3)
C130.027 (3)0.026 (3)0.018 (4)−0.001 (3)0.000 (3)0.001 (3)
C140.026 (3)0.015 (3)0.026 (4)−0.007 (3)0.011 (3)−0.003 (3)
C150.027 (3)0.019 (3)0.029 (4)0.006 (3)0.003 (3)0.003 (3)
C160.024 (3)0.018 (3)0.021 (4)0.001 (3)0.004 (3)−0.004 (3)
C170.022 (3)0.030 (4)0.021 (4)−0.002 (3)−0.002 (3)−0.005 (3)
O1W0.028 (3)0.039 (3)0.024 (3)0.000 (2)−0.005 (2)0.004 (2)
Cl1—C71.744 (6)C7—C81.362 (9)
O1—C121.360 (7)C8—C91.419 (9)
O1—C171.434 (7)C8—H80.9500
N1—C11.330 (8)C10—C111.471 (8)
N1—C91.361 (8)C10—H100.9500
N2—C31.348 (8)C11—C161.388 (9)
N2—N31.379 (7)C11—C121.401 (8)
N2—H2N0.8800C12—C131.388 (9)
N3—C101.282 (8)C13—C141.391 (9)
C1—C21.389 (9)C13—H130.9500
C1—H10.9500C14—C151.391 (9)
C2—C31.391 (9)C14—H140.9500
C2—H20.9500C15—C161.399 (9)
C3—C41.436 (8)C15—H150.9500
C4—C91.420 (8)C16—H160.9500
C4—C51.420 (9)C17—H17A0.9800
C5—C61.372 (9)C17—H17B0.9800
C5—H50.9500C17—H17C0.9800
C6—C71.396 (9)O1W—H1W0.81 (9)
C6—H60.9500O1W—H2W0.82 (9)
C12—O1—C17117.2 (5)N1—C9—C4123.4 (5)
C1—N1—C9116.6 (5)C8—C9—C4118.6 (6)
C3—N2—N3119.7 (5)N3—C10—C11120.7 (6)
C3—N2—H2N120.2N3—C10—H10119.6
N3—N2—H2N120.2C11—C10—H10119.6
C10—N3—N2114.6 (5)C16—C11—C12119.9 (6)
N1—C1—C2124.9 (6)C16—C11—C10121.4 (5)
N1—C1—H1117.6C12—C11—C10118.7 (5)
C2—C1—H1117.6O1—C12—C13124.3 (6)
C1—C2—C3119.9 (6)O1—C12—C11115.7 (5)
C1—C2—H2120.1C13—C12—C11120.0 (6)
C3—C2—H2120.1C12—C13—C14119.6 (6)
N2—C3—C2121.6 (6)C12—C13—H13120.2
N2—C3—C4121.2 (6)C14—C13—H13120.2
C2—C3—C4117.2 (5)C15—C14—C13120.9 (6)
C9—C4—C5119.1 (5)C15—C14—H14119.5
C9—C4—C3117.9 (5)C13—C14—H14119.5
C5—C4—C3122.9 (6)C14—C15—C16119.1 (6)
C6—C5—C4120.8 (6)C14—C15—H15120.4
C6—C5—H5119.6C16—C15—H15120.4
C4—C5—H5119.6C11—C16—C15120.3 (6)
C5—C6—C7119.3 (6)C11—C16—H16119.8
C5—C6—H6120.3C15—C16—H16119.8
C7—C6—H6120.3O1—C17—H17A109.5
C8—C7—C6122.0 (6)O1—C17—H17B109.5
C8—C7—Cl1119.7 (5)H17A—C17—H17B109.5
C6—C7—Cl1118.3 (5)O1—C17—H17C109.5
C7—C8—C9120.1 (6)H17A—C17—H17C109.5
C7—C8—H8119.9H17B—C17—H17C109.5
C9—C8—H8119.9H1W—O1W—H2W118 (9)
N1—C9—C8118.0 (5)
C3—N2—N3—C10−176.6 (6)C7—C8—C9—C41.1 (9)
C9—N1—C1—C23.4 (9)C5—C4—C9—N1178.9 (6)
N1—C1—C2—C3−2.1 (10)C3—C4—C9—N1−0.4 (9)
N3—N2—C3—C20.5 (9)C5—C4—C9—C8−0.8 (9)
N3—N2—C3—C4179.6 (5)C3—C4—C9—C8179.9 (6)
C1—C2—C3—N2178.5 (6)N2—N3—C10—C11−177.0 (5)
C1—C2—C3—C4−0.6 (9)N3—C10—C11—C166.9 (9)
N2—C3—C4—C9−177.4 (6)N3—C10—C11—C12−176.3 (6)
C2—C3—C4—C91.7 (8)C17—O1—C12—C132.3 (9)
N2—C3—C4—C53.3 (9)C17—O1—C12—C11−178.9 (5)
C2—C3—C4—C5−177.6 (6)C16—C11—C12—O1−177.5 (5)
C9—C4—C5—C60.0 (9)C10—C11—C12—O15.6 (8)
C3—C4—C5—C6179.3 (6)C16—C11—C12—C131.3 (9)
C4—C5—C6—C70.5 (9)C10—C11—C12—C13−175.6 (6)
C5—C6—C7—C8−0.1 (9)O1—C12—C13—C14178.2 (6)
C5—C6—C7—Cl1−179.9 (5)C11—C12—C13—C14−0.5 (9)
C6—C7—C8—C9−0.7 (10)C12—C13—C14—C15−0.6 (10)
Cl1—C7—C8—C9179.1 (5)C13—C14—C15—C160.9 (10)
C1—N1—C9—C8177.7 (6)C12—C11—C16—C15−1.0 (9)
C1—N1—C9—C4−2.0 (9)C10—C11—C16—C15175.8 (6)
C7—C8—C9—N1−178.6 (6)C14—C15—C16—C11−0.1 (10)
D—H···AD—HH···AD···AD—H···A
N2—H2N···O1W0.882.082.928 (7)161
O1W—H1W···N1i0.81 (9)2.30 (9)3.030 (8)150 (8)
O1W—H2W···N1ii0.82 (9)2.03 (9)2.820 (7)163 (8)
C5—H5···O1W0.952.433.358 (8)166
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N2—H2N⋯O1W0.882.082.928 (7)161
O1W—H1W⋯N1i0.81 (9)2.30 (9)3.030 (8)150 (8)
O1W—H2W⋯N1ii0.82 (9)2.03 (9)2.820 (7)163 (8)
C5—H5⋯O1W0.952.433.358 (8)166

Symmetry codes: (i) ; (ii) .

  7 in total

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2.  A short history of SHELX.

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Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Design and synthesis of substituted quinolines as novel and selective melanin concentrating hormone antagonists as anti-obesity agents.

Authors:  Namal C Warshakoon; Justin Sheville; Ritu Tiku Bhatt; Wei Ji; Jose L Mendez-Andino; Kenneth M Meyers; Nick Kim; John A Wos; Chrissy Mitchell; Jennifer L Paris; Beth B Pinney; Ofer Reizes; X Eric Hu
Journal:  Bioorg Med Chem Lett       Date:  2006-07-25       Impact factor: 2.823

4.  Enhanced activity of mefloquine and artesunic acid against Plasmodium falciparum in vitro and P. berghei in mice by combination with ciprofloxacin.

Authors:  Anderson Assunção Andrade; Fernando de Pilla Varotti; Isabela Oliveira de Freitas; Marcus Vinícius Nora de Souza; Thatyana Rocha Alves Vasconcelos; Núbia Boechat; Antoniana Ursine Krettli
Journal:  Eur J Pharmacol       Date:  2006-12-12       Impact factor: 4.432

5.  4-[(2-Chloro-ethyl)amino]quinolinium chloride monohydrate.

Authors:  Marcus V N de Souza; Edward R T Tiekink; James L Wardell; Solange M S V Wardell
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-11-21

6.  7-Chloro-4-[(E)-2-(4-methoxy-benzyl-idene)hydrazin-1-yl]quinoline monohydrate.

Authors:  Marcelle de Lima Ferreira; Marcus V N de Souza; R Alan Howie; Edward R T Tiekink; James L Wardell; Solange M S V Wardell
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-02-27

7.  7-Chloro-4-[(E)-N'-(4-fluoro-benzyl-idene)hydrazin-yl]quinoline monohydrate.

Authors:  Marcus V N de Souza; R Alan Howie; Edward R T Tiekink; James L Wardell; Solange M S V Wardell
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-12-16
  7 in total
  9 in total

1.  4-[(E)-2-(2-Chloro-benzyl-idene)hydrazin-1-yl]quinolin-1-ium chloride dihydrate.

Authors:  Edward R T Tiekink; Solange M S V Wardell; James L Wardell; Marcelle de Lima Ferreira; Marcus V N de Souza; Carlos R Kaiser
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-05-23

2.  3-[2-(4,4-Dimethyl-2,6-dioxocyclo-hexyl-idene)hydrazin-yl]benzonitrile.

Authors:  Naki Colak; Didem Aksakal; Omer Andaç; Orhan Büyükgüngör
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-04-24

3.  4-Chloro-2,5-dimethyl-quinoline.

Authors:  K Prabha; K N Vennila; K J Rajendra Prasad; D Velmurugan
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-07-14

4.  2-[(E)-Phen-yl(2-phenyl-hydrazin-1-yl-idene)meth-yl]phenol.

Authors:  R Alan Howie; James L Wardell; Solange M S V Wardell; Edward R T Tiekink
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-02-24

5.  N-(4,6-Dimeth-oxy-pyrimidin-2-yl)-2-(3-methyl-phen-yl)acetamide.

Authors:  A S Praveen; Jerry P Jasinski; James A Golen; H S Yathirajan; B Narayana
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-12-23

6.  2-{(E)-1-[2-(4-Nitro-phen-yl)hydrazin-1-yl-idene]eth-yl}benzene-1,3-diol.

Authors:  R Alan Howie; James L Wardell; Solange M S V Wardell; Edward R T Tiekink
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-02-10

7.  7-Chloro-4-[(E)-2-(2,5-dimeth-oxy-benzyl-idene)hydrazin-1-yl]quinoline.

Authors:  Marcus V N de Souza; Marcelle de Lima Ferreira; Solange M S V Wardell; Edward R T Tiekink; James L Wardell
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-03-31

8.  4-[(E)-2-(2,4-Dichloro-benzyl-idene)hydrazin-1-yl]quinolin-1-ium chloride monohydrate.

Authors:  Solange M S V Wardell; Edward R T Tiekink; James L Wardell; Marcelle de Lima Ferreira; Marcus V N de Souza
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-03-31

9.  7-Chloro-4-[(E)-2-(3,4,5-trimeth-oxy-benzyl-idene)hydrazin-1-yl]quinoline.

Authors:  Marcelle de Lima Ferreira; Marcus V N de Souza; Solange M S V Wardell; Edward R T Tiekink; James L Wardell
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-03-28
  9 in total

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