Literature DB >> 21580437

7-Chloro-4-[(E)-2-(4-methoxy-benzyl-idene)hydrazin-1-yl]quinoline monohydrate.

Marcelle de Lima Ferreira, Marcus V N de Souza, R Alan Howie, Edward R T Tiekink, James L Wardell, Solange M S V Wardell.   

Abstract

The organic mol-ecule in the title hydrate, C(17)H(14)ClN(3)O·H(2)O, has a small but significant twist from planarity, as seen in the dihedral angle of 12.10 (17)° between the n class="Chemical">quinoline and benzene rings. The conformation about the C=N bond is E. Chains along the b axis are formed in the crystal structure aided by water-quinoline O-H⋯N (× 2) and hydrazone-water N-H⋯O hydrogen bonds. Layers of these chains stack along the a axis via C-H⋯π and π-π inter-actions [ring centroid-ring centroid distance = 3.674 (2) Å]. C-H⋯O inter-actions are also present.

Entities:  

Year:  2010        PMID: 21580437      PMCID: PMC2983656          DOI: 10.1107/S1600536810006598

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to the pharmacological activity of quinoline derivatives, see: Warshakoon et al. (2006 ▶). For recent studies into quinoline-based anti-malarials, see: Andrade et al. (2007 ▶); de Souza et al. (2005 ▶). For related structures, see: Kaiser et al. (2009 ▶); de Souza et al. (2009 ▶, 2010 ▶).

Experimental

Crystal data

C17H14ClN3O·H2O M = 329.78 Triclinic, a = 7.0086 (6) Å b = 9.2384 (8) Å c = 13.3701 (12) Å α = 100.026 (4)° β = 103.903 (5)° γ = 107.000 (5)° V = 775.27 (12) Å3 Z = 2 Mo Kα radiation μ = 0.26 mm−1 T = 120 K 0.12 × 0.04 × 0.02 mm

Data collection

Nonius KappaCCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 2007 ▶) T min = 0.686, T max = 1.000 10514 measured reflections 2702 independent reflections 2037 reflections with I > 2σ(I) R int = 0.064

Refinement

R[F 2 > 2σ(F 2)] = 0.069 wR(F 2) = 0.150 S = 1.02 2702 reflections 215 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.30 e Å−3 Δρmin = −0.36 e Å−3 Data collection: COLLECT (Hooft, 1998 ▶); cell refinement: DENZO (Otwinowski & Minor, 1997 ▶) and COLLECT; data reduction: DEn class="Chemical">NZO and COLLECT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and DIAMOND (Brandenburg, 2006 ▶); software used to prepare material for publication: publCIF (Westrip, 2010 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810006598/lh5002sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810006598/lh5002Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C17H14ClN3O·H2OZ = 2
Mr = 329.78F(000) = 344
Triclinic, P1Dx = 1.413 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 7.0086 (6) ÅCell parameters from 27436 reflections
b = 9.2384 (8) Åθ = 2.9–27.5°
c = 13.3701 (12) ŵ = 0.26 mm1
α = 100.026 (4)°T = 120 K
β = 103.903 (5)°Needle, colourless
γ = 107.000 (5)°0.12 × 0.04 × 0.02 mm
V = 775.27 (12) Å3
Nonius KappaCCD area-detector diffractometer2702 independent reflections
Radiation source: Enraf Nonius FR591 rotating anode2037 reflections with I > 2σ(I)
10 cm confocal mirrorsRint = 0.064
Detector resolution: 9.091 pixels mm-1θmax = 25.0°, θmin = 3.1°
φ and ω scansh = −8→8
Absorption correction: multi-scan (SADABS; Sheldrick, 2007)k = −10→10
Tmin = 0.686, Tmax = 1.000l = −15→15
10514 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.069Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.150H atoms treated by a mixture of independent and constrained refinement
S = 1.02w = 1/[σ2(Fo2) + (0.0109P)2 + 2.93P] where P = (Fo2 + 2Fc2)/3
2702 reflections(Δ/σ)max = 0.001
215 parametersΔρmax = 0.30 e Å3
0 restraintsΔρmin = −0.36 e Å3
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl10.12492 (19)0.53097 (12)0.13214 (8)0.0337 (3)
O10.3226 (4)0.0839 (3)1.1296 (2)0.0268 (7)
N10.2963 (5)0.7665 (4)0.5289 (2)0.0233 (7)
N20.2484 (5)0.3358 (4)0.6035 (2)0.0226 (7)
H2N0.21930.25060.55270.027*
N30.2774 (5)0.3291 (4)0.7081 (2)0.0220 (7)
C10.3251 (6)0.7500 (4)0.6279 (3)0.0247 (9)
H10.36110.84180.68350.030*
C20.3074 (6)0.6112 (4)0.6569 (3)0.0217 (9)
H20.32390.60920.72920.026*
C30.2653 (6)0.4750 (4)0.5796 (3)0.0178 (8)
C40.2376 (6)0.4842 (4)0.4712 (3)0.0188 (8)
C50.2011 (6)0.3562 (4)0.3853 (3)0.0203 (8)
H50.19590.25760.39850.024*
C60.1728 (6)0.3715 (4)0.2828 (3)0.0215 (8)
H60.15180.28520.22590.026*
C70.1753 (6)0.5170 (4)0.2634 (3)0.0211 (8)
C80.2147 (6)0.6443 (4)0.3441 (3)0.0225 (9)
H80.21800.74170.32920.027*
C90.2507 (6)0.6313 (4)0.4502 (3)0.0201 (8)
C100.2358 (6)0.1919 (5)0.7224 (3)0.0235 (9)
H100.18790.10440.66200.028*
C110.2591 (6)0.1642 (4)0.8281 (3)0.0199 (8)
C120.2046 (6)0.0122 (4)0.8385 (3)0.0222 (9)
H120.1524−0.07240.77590.027*
C130.2235 (6)−0.0212 (4)0.9368 (3)0.0214 (8)
H130.1854−0.12670.94150.026*
C140.2985 (6)0.1016 (4)1.0276 (3)0.0217 (8)
C150.3569 (6)0.2567 (4)1.0201 (3)0.0229 (9)
H150.40990.34081.08300.027*
C160.3379 (6)0.2878 (4)0.9220 (3)0.0227 (9)
H160.37810.39340.91760.027*
C170.2580 (7)−0.0735 (4)1.1403 (3)0.0268 (9)
H17A0.1093−0.12801.09970.040*
H17B0.2787−0.07091.21580.040*
H17C0.3418−0.12911.11270.040*
O1W0.7337 (5)0.9550 (3)0.5298 (2)0.0309 (7)
H1W0.736 (8)1.039 (6)0.511 (4)0.046*
H2W0.610 (8)0.908 (6)0.530 (4)0.046*
U11U22U33U12U13U23
Cl10.0524 (7)0.0299 (6)0.0200 (5)0.0158 (5)0.0098 (5)0.0088 (4)
O10.0346 (17)0.0247 (15)0.0202 (14)0.0082 (13)0.0077 (12)0.0084 (11)
N10.0272 (19)0.0234 (17)0.0200 (17)0.0102 (15)0.0088 (14)0.0031 (13)
N20.0285 (19)0.0215 (17)0.0191 (17)0.0116 (15)0.0062 (14)0.0047 (13)
N30.0258 (19)0.0246 (18)0.0207 (17)0.0122 (15)0.0103 (14)0.0084 (14)
C10.025 (2)0.021 (2)0.026 (2)0.0067 (17)0.0097 (18)0.0019 (16)
C20.025 (2)0.024 (2)0.0171 (19)0.0085 (17)0.0100 (17)0.0035 (16)
C30.0147 (19)0.0195 (19)0.0205 (19)0.0066 (15)0.0067 (16)0.0058 (15)
C40.0126 (19)0.0185 (19)0.024 (2)0.0037 (15)0.0070 (16)0.0050 (15)
C50.020 (2)0.0164 (19)0.024 (2)0.0070 (16)0.0057 (16)0.0047 (15)
C60.018 (2)0.020 (2)0.025 (2)0.0038 (16)0.0088 (16)0.0041 (16)
C70.021 (2)0.023 (2)0.021 (2)0.0075 (17)0.0077 (16)0.0073 (16)
C80.024 (2)0.0175 (19)0.027 (2)0.0078 (16)0.0077 (17)0.0071 (16)
C90.016 (2)0.0194 (19)0.024 (2)0.0046 (16)0.0096 (16)0.0033 (16)
C100.024 (2)0.028 (2)0.020 (2)0.0108 (17)0.0086 (17)0.0053 (16)
C110.018 (2)0.0199 (19)0.023 (2)0.0068 (16)0.0085 (16)0.0071 (16)
C120.024 (2)0.022 (2)0.023 (2)0.0102 (17)0.0098 (17)0.0062 (16)
C130.023 (2)0.0154 (19)0.028 (2)0.0066 (16)0.0109 (17)0.0061 (16)
C140.022 (2)0.023 (2)0.022 (2)0.0076 (17)0.0093 (17)0.0085 (16)
C150.022 (2)0.019 (2)0.024 (2)0.0066 (17)0.0041 (17)0.0036 (16)
C160.024 (2)0.0168 (19)0.026 (2)0.0044 (16)0.0073 (17)0.0093 (16)
C170.032 (2)0.025 (2)0.028 (2)0.0113 (18)0.0109 (18)0.0114 (17)
O1W0.0347 (18)0.0205 (15)0.0434 (18)0.0117 (14)0.0171 (15)0.0123 (13)
Cl1—C71.740 (4)C7—C81.360 (5)
O1—C141.377 (4)C8—C91.413 (5)
O1—C171.435 (5)C8—H80.9500
N1—C11.332 (5)C10—C111.458 (5)
N1—C91.385 (5)C10—H100.9500
N2—C31.357 (5)C11—C121.385 (5)
N2—N31.380 (4)C11—C161.409 (5)
N2—H2N0.8800C12—C131.386 (5)
N3—C101.274 (5)C12—H120.9500
C1—C21.383 (5)C13—C141.379 (5)
C1—H10.9500C13—H130.9500
C2—C31.386 (5)C14—C151.400 (5)
C2—H20.9500C15—C161.374 (5)
C3—C41.435 (5)C15—H150.9500
C4—C91.417 (5)C16—H160.9500
C4—C51.411 (5)C17—H17A0.9800
C5—C61.374 (5)C17—H17B0.9800
C5—H50.9500C17—H17C0.9800
C6—C71.409 (5)O1W—H1W0.85 (5)
C6—H60.9500O1W—H2W0.85 (5)
C14—O1—C17117.0 (3)N1—C9—C8116.8 (3)
C1—N1—C9115.5 (3)C4—C9—C8119.7 (3)
C3—N2—N3119.4 (3)N3—C10—C11122.5 (3)
C3—N2—H2N120.3N3—C10—H10118.8
N3—N2—H2N120.3C11—C10—H10118.8
C10—N3—N2115.5 (3)C12—C11—C16117.8 (3)
N1—C1—C2125.9 (4)C12—C11—C10119.9 (3)
N1—C1—H1117.0C16—C11—C10122.3 (3)
C2—C1—H1117.0C11—C12—C13122.5 (4)
C1—C2—C3119.5 (3)C11—C12—H12118.8
C1—C2—H2120.3C13—C12—H12118.8
C3—C2—H2120.3C14—C13—C12118.8 (3)
N2—C3—C2122.1 (3)C14—C13—H13120.6
N2—C3—C4120.0 (3)C12—C13—H13120.6
C2—C3—C4117.9 (3)O1—C14—C13124.4 (3)
C9—C4—C5118.4 (3)O1—C14—C15115.4 (3)
C9—C4—C3117.7 (3)C13—C14—C15120.2 (3)
C5—C4—C3123.9 (3)C16—C15—C14120.2 (4)
C6—C5—C4121.3 (3)C16—C15—H15119.9
C6—C5—H5119.3C14—C15—H15119.9
C4—C5—H5119.3C15—C16—C11120.5 (3)
C5—C6—C7119.0 (3)C15—C16—H16119.8
C5—C6—H6120.5C11—C16—H16119.8
C7—C6—H6120.5O1—C17—H17A109.5
C8—C7—C6121.6 (3)O1—C17—H17B109.5
C8—C7—Cl1120.0 (3)H17A—C17—H17B109.5
C6—C7—Cl1118.3 (3)O1—C17—H17C109.5
C7—C8—C9119.8 (3)H17A—C17—H17C109.5
C7—C8—H8120.1H17B—C17—H17C109.5
C9—C8—H8120.1H1W—O1W—H2W108 (5)
N1—C9—C4123.5 (3)
C3—N2—N3—C10172.4 (3)C3—C4—C9—N12.5 (5)
C9—N1—C1—C2−2.0 (6)C5—C4—C9—C83.8 (5)
N1—C1—C2—C33.1 (6)C3—C4—C9—C8−177.0 (3)
N3—N2—C3—C2−1.1 (5)C7—C8—C9—N1178.1 (3)
N3—N2—C3—C4179.4 (3)C7—C8—C9—C4−2.4 (6)
C1—C2—C3—N2179.3 (3)N2—N3—C10—C11179.7 (3)
C1—C2—C3—C4−1.2 (5)N3—C10—C11—C12177.7 (4)
N2—C3—C4—C9178.2 (3)N3—C10—C11—C16−2.8 (6)
C2—C3—C4—C9−1.3 (5)C16—C11—C12—C130.5 (6)
N2—C3—C4—C5−2.7 (5)C10—C11—C12—C13180.0 (4)
C2—C3—C4—C5177.8 (3)C11—C12—C13—C140.3 (6)
C9—C4—C5—C6−1.8 (5)C17—O1—C14—C13−2.2 (5)
C3—C4—C5—C6179.1 (4)C17—O1—C14—C15178.0 (3)
C4—C5—C6—C7−1.6 (6)C12—C13—C14—O1179.4 (4)
C5—C6—C7—C83.1 (6)C12—C13—C14—C15−0.9 (6)
C5—C6—C7—Cl1−176.5 (3)O1—C14—C15—C16−179.5 (3)
C6—C7—C8—C9−1.1 (6)C13—C14—C15—C160.7 (6)
Cl1—C7—C8—C9178.5 (3)C14—C15—C16—C110.1 (6)
C1—N1—C9—C4−0.9 (5)C12—C11—C16—C15−0.7 (6)
C1—N1—C9—C8178.6 (3)C10—C11—C16—C15179.8 (4)
C5—C4—C9—N1−176.7 (3)
Cg is the centroid of the C11–C16 ring.
D—H···AD—HH···AD···AD—H···A
O1w—H1w···N1i0.85 (5)2.02 (5)2.867 (4)172 (5)
N2—H2n···O1wii0.882.183.007 (4)157
O1w—H2w···N10.85 (5)2.20 (5)3.047 (5)175 (5)
C5—H5···O1wii0.952.453.380 (5)165
C17—H17a···Cgiii0.982.653.508 (5)147
Table 1

Hydrogen-bond geometry (Å, °)

Cg is the centroid of the C11–C16 ring.

D—H⋯AD—HH⋯ADAD—H⋯A
O1w—H1w⋯N1i0.85 (5)2.02 (5)2.867 (4)172 (5)
O1w—H2w⋯N10.85 (5)2.20 (5)3.047 (5)175 (5)
N2—H2n⋯O1wii0.882.183.007 (4)157
C5—H5⋯O1wii0.952.453.380 (5)165
C17—H17a⋯Cgiii0.982.653.508 (5)147

Symmetry codes: (i) ; (ii) ; (iii) .

  6 in total

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2.  A short history of SHELX.

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3.  Design and synthesis of substituted quinolines as novel and selective melanin concentrating hormone antagonists as anti-obesity agents.

Authors:  Namal C Warshakoon; Justin Sheville; Ritu Tiku Bhatt; Wei Ji; Jose L Mendez-Andino; Kenneth M Meyers; Nick Kim; John A Wos; Chrissy Mitchell; Jennifer L Paris; Beth B Pinney; Ofer Reizes; X Eric Hu
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4.  Enhanced activity of mefloquine and artesunic acid against Plasmodium falciparum in vitro and P. berghei in mice by combination with ciprofloxacin.

Authors:  Anderson Assunção Andrade; Fernando de Pilla Varotti; Isabela Oliveira de Freitas; Marcus Vinícius Nora de Souza; Thatyana Rocha Alves Vasconcelos; Núbia Boechat; Antoniana Ursine Krettli
Journal:  Eur J Pharmacol       Date:  2006-12-12       Impact factor: 4.432

5.  4-[(2-Chloro-ethyl)amino]quinolinium chloride monohydrate.

Authors:  Marcus V N de Souza; Edward R T Tiekink; James L Wardell; Solange M S V Wardell
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-11-21

6.  7-Chloro-4-[(E)-N'-(4-fluoro-benzyl-idene)hydrazin-yl]quinoline monohydrate.

Authors:  Marcus V N de Souza; R Alan Howie; Edward R T Tiekink; James L Wardell; Solange M S V Wardell
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-12-16
  6 in total
  2 in total

1.  7-Chloro-4-[(E)-2-(2-methoxy-benzyl-idene)hydrazin-1-yl]quinoline monohydrate.

Authors:  Marcus V N de Souza; R Alan Howie; Edward R T Tiekink; James L Wardell; Solange M S V Wardell; Carlos R Kaiser
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-02-27

2.  7-Chloro-4-[(E)-2-(2,5-dimeth-oxy-benzyl-idene)hydrazin-1-yl]quinoline.

Authors:  Marcus V N de Souza; Marcelle de Lima Ferreira; Solange M S V Wardell; Edward R T Tiekink; James L Wardell
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-03-31
  2 in total

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