Literature DB >> 22606166

4-[(E)-2-(2,4-Dichloro-benzyl-idene)hydrazin-1-yl]quinolin-1-ium chloride monohydrate.

Solange M S V Wardell, Edward R T Tiekink, James L Wardell, Marcelle de Lima Ferreira, Marcus V N de Souza.   

Abstract

In the title hydrated salt, C(16)H(12)Cl(2)N(3) (+)·Cl(-)·H(2)O, there is a small twist in the cation as seen in the torsion angle linking the benzene ring to the rest of the mol-ecule [171.96 (17)°]. In the crystal, the quinolinium H atom forms a hydrogen bond to the lattice water mol-ecule, which also forms hydrogen bonds to two Cl(-) anions. Each Cl(-) ion also accepts a hydrogen bond from the hydrazine H atom. The three-dimensional architecture is also stabilized by π-π inter-actions between centrosymmetrically related quinoline residues [centroid-centroid distance = 3.5574 (11) Å].

Entities:  

Year:  2012        PMID: 22606166      PMCID: PMC3344163          DOI: 10.1107/S1600536812012962

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological activity, including anti-tubercular and anti-tumour activity, of compounds containing the quinolinyl nucleus, see: de Souza et al. (2009 ▶), Candea et al. (2009 ▶); Montenegro et al. (2011 ▶, 2012 ▶). For related structures, see: Howie et al. (2010 ▶); de Souza et al. (2010 ▶).

Experimental

Crystal data

C16H12Cl2N3 +·Cl−·H2O M = 370.65 Triclinic, a = 7.6815 (2) Å b = 9.7491 (3) Å c = 10.8418 (3) Å α = 87.831 (2)° β = 87.171 (2)° γ = 87.146 (2)° V = 809.41 (4) Å3 Z = 2 Mo Kα radiation μ = 0.57 mm−1 T = 120 K 0.10 × 0.09 × 0.08 mm

Data collection

Bruker–Nonius Roper CCD camera on a κ-goniostat diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 2007 ▶) T min = 0.666, T max = 0.746 16815 measured reflections 3701 independent reflections 3016 reflections with I > 2σ(I) R int = 0.056

Refinement

R[F 2 > 2σ(F 2)] = 0.041 wR(F 2) = 0.103 S = 1.06 3701 reflections 220 parameters 5 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.36 e Å−3 Δρmin = −0.34 e Å−3 Data collection: COLLECT (Hooft, 1998 ▶); cell refinement: DENZO (Otwinowski & Minor, 1997 ▶) and COLLECT; data reduction: DENZO and COLLECT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and DIAMOND (Brandenburg, 2006 ▶); software used to prepare material for publication: publCIF (Westrip, 2010 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812012962/xu5495sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812012962/xu5495Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812012962/xu5495Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C16H12Cl2N3+·Cl·H2OZ = 2
Mr = 370.65F(000) = 380
Triclinic, P1Dx = 1.521 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 7.6815 (2) ÅCell parameters from 10943 reflections
b = 9.7491 (3) Åθ = 2.9–27.5°
c = 10.8418 (3) ŵ = 0.57 mm1
α = 87.831 (2)°T = 120 K
β = 87.171 (2)°Block, colourless
γ = 87.146 (2)°0.10 × 0.09 × 0.08 mm
V = 809.41 (4) Å3
Bruker–Nonius Roper CCD camera on a κ-goniostat diffractometer3701 independent reflections
Radiation source: Bruker–Nonius FR591 rotating anode3016 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.056
Detector resolution: 9.091 pixels mm-1θmax = 27.5°, θmin = 3.2°
φ and ω scansh = −9→9
Absorption correction: multi-scan (SADABS; Sheldrick, 2007)k = −12→12
Tmin = 0.666, Tmax = 0.746l = −14→14
16815 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.041Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.103H atoms treated by a mixture of independent and constrained refinement
S = 1.06w = 1/[σ2(Fo2) + (0.0455P)2 + 0.2111P] where P = (Fo2 + 2Fc2)/3
3701 reflections(Δ/σ)max = 0.001
220 parametersΔρmax = 0.36 e Å3
5 restraintsΔρmin = −0.34 e Å3
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl10.23598 (6)1.20701 (5)0.14241 (5)0.02343 (14)
Cl20.81838 (6)1.41676 (5)−0.06262 (5)0.02564 (14)
N10.7250 (2)0.35248 (17)0.32132 (15)0.0184 (3)
H1n0.785 (2)0.2747 (14)0.337 (2)0.022*
N20.4580 (2)0.72610 (16)0.26643 (15)0.0176 (3)
H2n0.3464 (14)0.740 (2)0.2871 (19)0.021*
N30.5488 (2)0.83194 (16)0.21124 (14)0.0177 (3)
C10.8043 (3)0.4576 (2)0.26455 (18)0.0207 (4)
H10.92350.44530.23780.025*
C20.7194 (2)0.5834 (2)0.24339 (17)0.0196 (4)
H20.77940.65660.20290.024*
C30.5435 (2)0.60214 (19)0.28223 (16)0.0161 (4)
C40.4548 (2)0.48914 (19)0.34195 (16)0.0157 (4)
C50.2776 (2)0.4957 (2)0.38498 (17)0.0186 (4)
H50.20800.57780.37190.022*
C60.2056 (3)0.3845 (2)0.44529 (18)0.0207 (4)
H60.08680.39070.47420.025*
C70.3057 (3)0.2609 (2)0.46494 (18)0.0218 (4)
H70.25440.18490.50740.026*
C80.4769 (3)0.2506 (2)0.42284 (18)0.0202 (4)
H80.54410.16720.43530.024*
C90.5527 (2)0.36373 (19)0.36120 (16)0.0167 (4)
C100.4620 (2)0.94746 (19)0.19875 (17)0.0176 (4)
H100.34400.95760.22880.021*
C110.5500 (2)1.06322 (19)0.13685 (17)0.0171 (4)
C120.4584 (2)1.18619 (19)0.10639 (17)0.0174 (4)
C130.5395 (2)1.2951 (2)0.04510 (17)0.0190 (4)
H130.47541.37830.02580.023*
C140.7152 (3)1.27973 (19)0.01280 (17)0.0193 (4)
C150.8113 (2)1.1589 (2)0.04001 (18)0.0210 (4)
H150.93171.14910.01570.025*
C160.7286 (3)1.0533 (2)0.10297 (18)0.0207 (4)
H160.79450.97150.12410.025*
Cl30.05983 (6)0.83146 (5)0.32453 (5)0.02497 (14)
O1w0.8874 (3)0.11709 (18)0.39542 (16)0.0445 (5)
H1w0.908 (4)0.119 (3)0.4704 (12)0.067*
H2w0.933 (4)0.0432 (19)0.370 (3)0.067*
U11U22U33U12U13U23
Cl10.0168 (2)0.0208 (3)0.0321 (3)0.00144 (18)0.00122 (19)0.0017 (2)
Cl20.0283 (3)0.0229 (3)0.0258 (3)−0.0093 (2)0.0037 (2)0.0014 (2)
N10.0188 (8)0.0192 (8)0.0164 (8)0.0052 (7)0.0006 (6)0.0008 (7)
N20.0171 (8)0.0150 (8)0.0206 (8)0.0000 (6)−0.0001 (6)0.0007 (6)
N30.0196 (8)0.0164 (8)0.0173 (8)−0.0033 (6)−0.0013 (6)0.0015 (6)
C10.0190 (9)0.0238 (10)0.0187 (10)0.0020 (8)0.0007 (8)0.0009 (8)
C20.0209 (9)0.0189 (10)0.0187 (10)−0.0016 (8)0.0001 (8)0.0026 (8)
C30.0198 (9)0.0174 (9)0.0112 (8)0.0004 (7)−0.0021 (7)−0.0019 (7)
C40.0186 (9)0.0162 (9)0.0125 (9)0.0005 (7)−0.0026 (7)−0.0007 (7)
C50.0201 (9)0.0176 (10)0.0177 (9)0.0032 (8)−0.0018 (8)−0.0009 (7)
C60.0208 (10)0.0207 (10)0.0205 (10)−0.0015 (8)0.0008 (8)−0.0019 (8)
C70.0257 (10)0.0189 (10)0.0204 (10)−0.0030 (8)0.0020 (8)0.0022 (8)
C80.0270 (10)0.0154 (9)0.0180 (10)0.0022 (8)−0.0031 (8)0.0011 (7)
C90.0190 (9)0.0179 (10)0.0131 (9)0.0020 (8)−0.0017 (7)−0.0022 (7)
C100.0176 (9)0.0182 (10)0.0169 (9)−0.0005 (8)−0.0001 (7)−0.0003 (7)
C110.0187 (9)0.0180 (10)0.0150 (9)−0.0025 (7)−0.0009 (7)−0.0021 (7)
C120.0163 (9)0.0187 (10)0.0175 (9)−0.0004 (7)−0.0019 (7)−0.0034 (7)
C130.0229 (10)0.0162 (9)0.0179 (10)−0.0009 (8)−0.0013 (8)0.0010 (7)
C140.0247 (10)0.0169 (10)0.0172 (9)−0.0078 (8)−0.0023 (8)−0.0005 (7)
C150.0173 (9)0.0230 (10)0.0229 (10)−0.0020 (8)0.0008 (8)−0.0031 (8)
C160.0210 (10)0.0186 (10)0.0225 (10)0.0020 (8)−0.0024 (8)−0.0016 (8)
Cl30.0219 (3)0.0205 (3)0.0312 (3)0.00329 (19)0.0060 (2)0.0001 (2)
O1w0.0646 (12)0.0317 (9)0.0356 (10)0.0289 (9)−0.0141 (9)−0.0066 (8)
Cl1—C121.7374 (19)C6—H60.9500
Cl2—C141.7435 (19)C7—C81.371 (3)
N1—C11.334 (3)C7—H70.9500
N1—C91.372 (2)C8—C91.404 (3)
N1—H1n0.884 (9)C8—H80.9500
N2—C31.355 (2)C10—C111.468 (3)
N2—N31.376 (2)C10—H100.9500
N2—H2n0.881 (9)C11—C121.396 (3)
N3—C101.286 (2)C11—C161.402 (3)
C1—C21.377 (3)C12—C131.388 (3)
C1—H10.9500C13—C141.380 (3)
C2—C31.401 (3)C13—H130.9500
C2—H20.9500C14—C151.389 (3)
C3—C41.440 (3)C15—C161.377 (3)
C4—C91.418 (2)C15—H150.9500
C4—C51.416 (3)C16—H160.9500
C5—C61.371 (3)O1w—H1w0.836 (10)
C5—H50.9500O1w—H2w0.834 (10)
C6—C71.412 (3)
C1—N1—C9121.52 (16)C7—C8—C9119.77 (17)
C1—N1—H1n119.8 (14)C7—C8—H8120.1
C9—N1—H1n118.6 (14)C9—C8—H8120.1
C3—N2—N3118.12 (16)N1—C9—C8119.09 (16)
C3—N2—H2n122.5 (14)N1—C9—C4119.98 (17)
N3—N2—H2n119.3 (14)C8—C9—C4120.93 (17)
C10—N3—N2115.69 (16)N3—C10—C11118.31 (17)
N1—C1—C2122.28 (18)N3—C10—H10120.8
N1—C1—H1118.9C11—C10—H10120.8
C2—C1—H1118.9C12—C11—C16117.33 (17)
C1—C2—C3119.17 (18)C12—C11—C10121.41 (17)
C1—C2—H2120.4C16—C11—C10121.24 (17)
C3—C2—H2120.4C13—C12—C11121.87 (17)
N2—C3—C2120.53 (17)C13—C12—Cl1117.49 (14)
N2—C3—C4120.06 (17)C11—C12—Cl1120.64 (15)
C2—C3—C4119.39 (17)C14—C13—C12118.55 (18)
C9—C4—C5117.85 (17)C14—C13—H13120.7
C9—C4—C3117.65 (17)C12—C13—H13120.7
C5—C4—C3124.49 (17)C13—C14—C15121.63 (18)
C6—C5—C4120.52 (17)C13—C14—Cl2118.79 (15)
C6—C5—H5119.7C15—C14—Cl2119.58 (15)
C4—C5—H5119.7C16—C15—C14118.69 (18)
C5—C6—C7120.85 (18)C16—C15—H15120.7
C5—C6—H6119.6C14—C15—H15120.7
C7—C6—H6119.6C15—C16—C11121.90 (18)
C8—C7—C6120.07 (18)C15—C16—H16119.0
C8—C7—H7120.0C11—C16—H16119.0
C6—C7—H7120.0H1w—O1w—H2w107 (3)
C3—N2—N3—C10−179.79 (16)C5—C4—C9—N1−179.89 (16)
C9—N1—C1—C20.5 (3)C3—C4—C9—N1−1.2 (3)
N1—C1—C2—C3−0.2 (3)C5—C4—C9—C8−1.1 (3)
N3—N2—C3—C20.1 (3)C3—C4—C9—C8177.65 (16)
N3—N2—C3—C4178.67 (15)N2—N3—C10—C11−178.02 (15)
C1—C2—C3—N2177.78 (17)N3—C10—C11—C12171.96 (17)
C1—C2—C3—C4−0.8 (3)N3—C10—C11—C16−6.3 (3)
N2—C3—C4—C9−177.12 (16)C16—C11—C12—C130.0 (3)
C2—C3—C4—C91.5 (3)C10—C11—C12—C13−178.37 (17)
N2—C3—C4—C51.5 (3)C16—C11—C12—Cl1178.98 (14)
C2—C3—C4—C5−179.93 (17)C10—C11—C12—Cl10.6 (3)
C9—C4—C5—C61.2 (3)C11—C12—C13—C140.6 (3)
C3—C4—C5—C6−177.37 (17)Cl1—C12—C13—C14−178.43 (14)
C4—C5—C6—C7−0.5 (3)C12—C13—C14—C150.1 (3)
C5—C6—C7—C8−0.4 (3)C12—C13—C14—Cl2−179.28 (14)
C6—C7—C8—C90.6 (3)C13—C14—C15—C16−1.3 (3)
C1—N1—C9—C8−178.63 (17)Cl2—C14—C15—C16178.04 (15)
C1—N1—C9—C40.2 (3)C14—C15—C16—C111.9 (3)
C7—C8—C9—N1178.98 (17)C12—C11—C16—C15−1.3 (3)
C7—C8—C9—C40.1 (3)C10—C11—C16—C15177.08 (17)
D—H···AD—HH···AD···AD—H···A
N1—H1n···O1w0.88 (2)1.80 (2)2.673 (2)170 (2)
O1w—H1w···Cl3i0.84 (2)2.32 (2)3.1451 (18)169 (3)
N2—H2n···Cl30.88 (1)2.36 (1)3.2175 (16)166 (2)
O1w—H2w···Cl3ii0.84 (2)2.30 (2)3.1295 (19)173 (3)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1n⋯O1w0.88 (2)1.80 (2)2.673 (2)170 (2)
O1w—H1w⋯Cl3i0.84 (2)2.32 (2)3.1451 (18)169 (3)
N2—H2n⋯Cl30.88 (1)2.36 (1)3.2175 (16)166 (2)
O1w—H2w⋯Cl3ii0.84 (2)2.30 (2)3.1295 (19)173 (3)

Symmetry codes: (i) ; (ii) .

  5 in total

1.  Synthesis and antitumoral evaluation of 7-chloro-4-quinolinylhydrazones derivatives.

Authors:  Raquel Carvalho Montenegro; Letícia Veras Lotufo; Manoel Odorico de Moraes; Cláudia do Ó Pessoa; Felipe Augusto Rocha Rodrigues; Marcelle de Lima Ferreira Bispo; Laura Nogueira de Faria Cardoso; Carlos Roland Kaiser; Marcus Vinícius Nora de Souza
Journal:  Med Chem       Date:  2011-11       Impact factor: 2.745

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Synthesis and in vitro antitubercular activity of a series of quinoline derivatives.

Authors:  Marcus V N de Souza; Karla C Pais; Carlos R Kaiser; Mônica A Peralta; Marcelle de L Ferreira; Maria C S Lourenço
Journal:  Bioorg Med Chem       Date:  2009-01-15       Impact factor: 3.641

4.  Synthesis and antitubercular activity of 7-chloro-4-quinolinylhydrazones derivatives.

Authors:  André L P Candéa; Marcelle de L Ferreira; Karla C Pais; Laura N de F Cardoso; Carlos R Kaiser; Maria das Graças M de O Henriques; Maria C S Lourenço; Flávio A F M Bezerra; Marcus V N de Souza
Journal:  Bioorg Med Chem Lett       Date:  2009-09-29       Impact factor: 2.823

5.  7-Chloro-4-[(E)-2-(2-methoxy-benzyl-idene)hydrazin-1-yl]quinoline monohydrate.

Authors:  Marcus V N de Souza; R Alan Howie; Edward R T Tiekink; James L Wardell; Solange M S V Wardell; Carlos R Kaiser
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-02-27
  5 in total
  1 in total

1.  4-[(E)-2-(2-Chloro-benzyl-idene)hydrazin-1-yl]quinolin-1-ium chloride dihydrate.

Authors:  Edward R T Tiekink; Solange M S V Wardell; James L Wardell; Marcelle de Lima Ferreira; Marcus V N de Souza; Carlos R Kaiser
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-05-23
  1 in total

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