Literature DB >> 22606177

7-Chloro-4-[(E)-2-(2,5-dimeth-oxy-benzyl-idene)hydrazin-1-yl]quinoline.

Marcus V N de Souza, Marcelle de Lima Ferreira, Solange M S V Wardell, Edward R T Tiekink, James L Wardell.   

Abstract

In the nearly planar title compound (r.m.s. deviation for the 24 non-H atoms = 0.064 Å), C(18)H(16)ClN(3)O(2), the conformation about the N=C bond is E. Supra-molecular chains propagated by glide symmetry along [001] are found in the crystal packing. These are sustained by N-H⋯N hydrogen bonds with the quinoline N atom being the acceptor. The chains are connected into a three-dimensional architecture by π-π inter-actions involving all three aromatic rings [centroid-centroid distances = 3.5650 (9)-3.6264 (9) Å].

Entities:  

Year:  2012        PMID: 22606177      PMCID: PMC3344174          DOI: 10.1107/S1600536812012871

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological activity, including anti-tubercular and anti-tumour activity, of compounds containing the quinolinyl nucleus, see: de Souza et al. (2009 ▶); Candea et al. (2009 ▶); Montenegro et al. (2011 ▶, 2012 ▶). For related structures, see: Howie et al. (2010 ▶); de Souza et al. (2010 ▶); de Lima Ferreira et al. (2010 ▶). For the synthesis, see: Montenegro et al. (2012 ▶).

Experimental

Crystal data

C18H16ClN3O2 M = 341.79 Monoclinic, a = 10.5183 (2) Å b = 12.9132 (3) Å c = 12.9861 (2) Å β = 112.723 (2)° V = 1626.93 (5) Å3 Z = 4 Mo Kα radiation μ = 0.25 mm−1 T = 120 K 0.32 × 0.20 × 0.15 mm

Data collection

Bruker–Nonius Roper CCD camera on a κ-goniostat diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 2007 ▶) T min = 0.652, T max = 0.746 20405 measured reflections 3723 independent reflections 3067 reflections with I > 2σ(I) R int = 0.049

Refinement

R[F 2 > 2σ(F 2)] = 0.041 wR(F 2) = 0.107 S = 1.03 3723 reflections 222 parameters 1 restraint H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.33 e Å−3 Δρmin = −0.33 e Å−3 Data collection: COLLECT (Hooft, 1998 ▶); cell refinement: DENZO (Otwinowski & Minor, 1997 ▶) and COLLECT; data reduction: DENZO and COLLECT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and DIAMOND (Brandenburg, 2006 ▶); software used to prepare material for publication: publCIF (Westrip, 2010 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812012871/xu5494sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812012871/xu5494Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812012871/xu5494Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C18H16ClN3O2F(000) = 712
Mr = 341.79Dx = 1.395 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 8419 reflections
a = 10.5183 (2) Åθ = 2.9–27.5°
b = 12.9132 (3) ŵ = 0.25 mm1
c = 12.9861 (2) ÅT = 120 K
β = 112.723 (2)°Prism, yellow
V = 1626.93 (5) Å30.32 × 0.20 × 0.15 mm
Z = 4
Bruker–Nonius Roper CCD camera on a κ-goniostat diffractometer3723 independent reflections
Radiation source: Bruker–Nonius FR591 rotating anode3067 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.049
Detector resolution: 9.091 pixels mm-1θmax = 27.5°, θmin = 3.2°
φ and ω scansh = −13→13
Absorption correction: multi-scan (SADABS; Sheldrick, 2007)k = −15→16
Tmin = 0.652, Tmax = 0.746l = −16→16
20405 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.041Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.107H atoms treated by a mixture of independent and constrained refinement
S = 1.03w = 1/[σ2(Fo2) + (0.0516P)2 + 0.6611P] where P = (Fo2 + 2Fc2)/3
3723 reflections(Δ/σ)max = 0.001
222 parametersΔρmax = 0.33 e Å3
1 restraintΔρmin = −0.33 e Å3
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl10.07757 (4)0.46710 (3)0.65860 (3)0.02240 (13)
O10.67832 (11)0.06456 (8)0.25193 (8)0.0200 (2)
O20.98754 (12)−0.18234 (9)0.60966 (10)0.0273 (3)
N10.45113 (13)0.19900 (10)0.83352 (10)0.0169 (3)
N20.53424 (13)0.16602 (10)0.54269 (10)0.0169 (3)
H2N0.4970 (16)0.2057 (11)0.4831 (10)0.020*
N30.63038 (13)0.09359 (10)0.54186 (10)0.0174 (3)
C10.54351 (15)0.13277 (12)0.82563 (12)0.0173 (3)
H10.59270.09210.88970.021*
C20.57480 (15)0.11751 (12)0.73189 (12)0.0172 (3)
H20.64070.06690.73270.021*
C30.50855 (15)0.17718 (11)0.63725 (12)0.0143 (3)
C40.40798 (14)0.25126 (11)0.64014 (11)0.0135 (3)
C50.33252 (15)0.31670 (11)0.54965 (12)0.0157 (3)
H50.35020.31430.48330.019*
C60.23425 (15)0.38355 (11)0.55596 (12)0.0168 (3)
H60.18500.42770.49500.020*
C70.20770 (15)0.38559 (11)0.65392 (12)0.0155 (3)
C80.27876 (15)0.32511 (11)0.74402 (12)0.0158 (3)
H80.25890.32870.80940.019*
C90.38202 (14)0.25713 (11)0.73985 (12)0.0142 (3)
C100.64283 (15)0.08142 (11)0.44812 (12)0.0157 (3)
H100.58690.12090.38510.019*
C110.74242 (15)0.00736 (11)0.43720 (12)0.0145 (3)
C120.75975 (15)−0.00070 (11)0.33516 (12)0.0156 (3)
C130.85456 (16)−0.07004 (12)0.32490 (13)0.0194 (3)
H130.8663−0.07520.25610.023*
C140.93308 (16)−0.13246 (12)0.41476 (13)0.0203 (3)
H140.9977−0.18000.40700.024*
C150.91658 (15)−0.12495 (12)0.51558 (13)0.0195 (3)
C160.82194 (15)−0.05485 (11)0.52614 (13)0.0172 (3)
H160.8114−0.04940.59540.021*
C170.7013 (2)0.06604 (15)0.15086 (14)0.0303 (4)
H17A0.79810.08270.16740.045*
H17B0.64210.11850.10050.045*
H17C0.6796−0.00210.11510.045*
C181.09064 (17)−0.25167 (13)0.60485 (16)0.0306 (4)
H18A1.0479−0.30350.54660.046*
H18B1.1349−0.28640.67710.046*
H18C1.1599−0.21270.58760.046*
U11U22U33U12U13U23
Cl10.0225 (2)0.0242 (2)0.0220 (2)0.00878 (15)0.01015 (16)0.00116 (15)
O10.0247 (6)0.0234 (6)0.0150 (5)0.0069 (5)0.0111 (5)0.0024 (4)
O20.0263 (6)0.0217 (6)0.0280 (6)0.0076 (5)0.0040 (5)0.0068 (5)
N10.0197 (6)0.0178 (6)0.0140 (6)0.0014 (5)0.0073 (5)0.0000 (5)
N20.0197 (7)0.0191 (7)0.0141 (6)0.0052 (5)0.0091 (5)0.0022 (5)
N30.0185 (6)0.0176 (6)0.0188 (6)0.0031 (5)0.0100 (5)−0.0005 (5)
C10.0189 (8)0.0183 (7)0.0143 (7)0.0015 (6)0.0057 (6)0.0024 (6)
C20.0175 (7)0.0184 (7)0.0161 (7)0.0028 (6)0.0067 (6)0.0002 (6)
C30.0148 (7)0.0152 (7)0.0139 (7)−0.0041 (5)0.0068 (6)−0.0031 (5)
C40.0141 (7)0.0143 (7)0.0127 (7)−0.0026 (5)0.0057 (6)−0.0017 (5)
C50.0183 (7)0.0174 (7)0.0128 (7)−0.0011 (6)0.0076 (6)0.0005 (6)
C60.0188 (7)0.0155 (7)0.0157 (7)0.0000 (6)0.0063 (6)0.0024 (6)
C70.0149 (7)0.0127 (7)0.0190 (7)0.0007 (5)0.0067 (6)−0.0029 (6)
C80.0184 (7)0.0171 (7)0.0141 (7)−0.0010 (6)0.0085 (6)−0.0019 (6)
C90.0157 (7)0.0139 (7)0.0125 (7)−0.0025 (6)0.0048 (5)−0.0021 (5)
C100.0163 (7)0.0164 (7)0.0150 (7)−0.0008 (6)0.0067 (6)0.0006 (6)
C110.0144 (7)0.0139 (7)0.0162 (7)−0.0024 (5)0.0072 (6)−0.0017 (5)
C120.0166 (7)0.0152 (7)0.0154 (7)−0.0007 (6)0.0065 (6)−0.0002 (5)
C130.0207 (8)0.0188 (8)0.0218 (8)−0.0006 (6)0.0113 (6)−0.0039 (6)
C140.0171 (7)0.0152 (7)0.0296 (8)0.0008 (6)0.0101 (7)−0.0029 (6)
C150.0165 (7)0.0142 (7)0.0237 (8)−0.0015 (6)0.0031 (6)0.0012 (6)
C160.0179 (7)0.0162 (7)0.0176 (7)−0.0029 (6)0.0071 (6)−0.0014 (6)
C170.0427 (11)0.0363 (10)0.0193 (8)0.0131 (8)0.0202 (8)0.0059 (7)
C180.0236 (9)0.0184 (8)0.0431 (11)0.0048 (7)0.0053 (8)0.0037 (7)
Cl1—C71.7462 (15)C6—H60.9500
O1—C121.3773 (18)C7—C81.365 (2)
O1—C171.4235 (18)C8—C91.414 (2)
O2—C151.3764 (18)C8—H80.9500
O2—C181.426 (2)C10—C111.465 (2)
N1—C11.3277 (19)C10—H100.9500
N1—C91.3742 (18)C11—C161.390 (2)
N2—C31.3631 (18)C11—C121.409 (2)
N2—N31.3805 (17)C12—C131.384 (2)
N2—H2N0.884 (9)C13—C141.396 (2)
N3—C101.2834 (18)C13—H130.9500
C1—C21.392 (2)C14—C151.389 (2)
C1—H10.9500C14—H140.9500
C2—C31.389 (2)C15—C161.391 (2)
C2—H20.9500C16—H160.9500
C3—C41.437 (2)C17—H17A0.9800
C4—C51.416 (2)C17—H17B0.9800
C4—C91.4248 (19)C17—H17C0.9800
C5—C61.373 (2)C18—H18A0.9800
C5—H50.9500C18—H18B0.9800
C6—C71.404 (2)C18—H18C0.9800
C12—O1—C17117.14 (12)N3—C10—C11120.69 (13)
C15—O2—C18117.38 (13)N3—C10—H10119.7
C1—N1—C9115.86 (12)C11—C10—H10119.7
C3—N2—N3118.64 (12)C16—C11—C12118.92 (13)
C3—N2—H2N123.5 (11)C16—C11—C10121.33 (13)
N3—N2—H2N117.7 (11)C12—C11—C10119.74 (13)
C10—N3—N2115.71 (12)O1—C12—C13124.95 (13)
N1—C1—C2125.86 (13)O1—C12—C11115.19 (13)
N1—C1—H1117.1C13—C12—C11119.85 (14)
C2—C1—H1117.1C12—C13—C14120.57 (14)
C3—C2—C1119.21 (13)C12—C13—H13119.7
C3—C2—H2120.4C14—C13—H13119.7
C1—C2—H2120.4C15—C14—C13119.91 (14)
N2—C3—C2122.16 (13)C15—C14—H14120.0
N2—C3—C4119.86 (13)C13—C14—H14120.0
C2—C3—C4117.96 (13)O2—C15—C14125.22 (14)
C5—C4—C9118.67 (13)O2—C15—C16115.23 (14)
C5—C4—C3123.90 (13)C14—C15—C16119.55 (14)
C9—C4—C3117.42 (12)C11—C16—C15121.20 (14)
C6—C5—C4121.28 (13)C11—C16—H16119.4
C6—C5—H5119.4C15—C16—H16119.4
C4—C5—H5119.4O1—C17—H17A109.5
C5—C6—C7118.92 (13)O1—C17—H17B109.5
C5—C6—H6120.5H17A—C17—H17B109.5
C7—C6—H6120.5O1—C17—H17C109.5
C8—C7—C6122.10 (13)H17A—C17—H17C109.5
C8—C7—Cl1119.49 (11)H17B—C17—H17C109.5
C6—C7—Cl1118.41 (11)O2—C18—H18A109.5
C7—C8—C9119.80 (13)O2—C18—H18B109.5
C7—C8—H8120.1H18A—C18—H18B109.5
C9—C8—H8120.1O2—C18—H18C109.5
N1—C9—C8117.18 (12)H18A—C18—H18C109.5
N1—C9—C4123.63 (13)H18B—C18—H18C109.5
C8—C9—C4119.18 (13)
C3—N2—N3—C10175.16 (13)C3—C4—C9—N12.5 (2)
C9—N1—C1—C2−0.3 (2)C5—C4—C9—C82.2 (2)
N1—C1—C2—C31.8 (2)C3—C4—C9—C8−176.72 (13)
N3—N2—C3—C2−0.6 (2)N2—N3—C10—C11179.47 (12)
N3—N2—C3—C4−179.38 (12)N3—C10—C11—C162.7 (2)
C1—C2—C3—N2−179.88 (14)N3—C10—C11—C12−176.54 (14)
C1—C2—C3—C4−1.1 (2)C17—O1—C12—C13−5.0 (2)
N2—C3—C4—C5−1.0 (2)C17—O1—C12—C11174.34 (14)
C2—C3—C4—C5−179.75 (14)C16—C11—C12—O1−179.20 (13)
N2—C3—C4—C9177.93 (13)C10—C11—C12—O10.1 (2)
C2—C3—C4—C9−0.9 (2)C16—C11—C12—C130.2 (2)
C9—C4—C5—C6−1.1 (2)C10—C11—C12—C13179.50 (13)
C3—C4—C5—C6177.74 (13)O1—C12—C13—C14179.53 (14)
C4—C5—C6—C7−0.8 (2)C11—C12—C13—C140.2 (2)
C5—C6—C7—C81.6 (2)C12—C13—C14—C15−0.2 (2)
C5—C6—C7—Cl1−177.40 (11)C18—O2—C15—C143.0 (2)
C6—C7—C8—C9−0.5 (2)C18—O2—C15—C16−176.98 (13)
Cl1—C7—C8—C9178.51 (11)C13—C14—C15—O2179.83 (14)
C1—N1—C9—C8177.32 (13)C13—C14—C15—C16−0.2 (2)
C1—N1—C9—C4−1.9 (2)C12—C11—C16—C15−0.6 (2)
C7—C8—C9—N1179.30 (13)C10—C11—C16—C15−179.88 (13)
C7—C8—C9—C4−1.4 (2)O2—C15—C16—C11−179.42 (13)
C5—C4—C9—N1−178.56 (13)C14—C15—C16—C110.6 (2)
D—H···AD—HH···AD···AD—H···A
N2—H2n···N1i0.88 (1)2.19 (1)3.0572 (17)167 (2)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N2—H2n⋯N1i0.88 (1)2.19 (1)3.0572 (17)167 (2)

Symmetry code: (i) .

  6 in total

1.  Synthesis and antitumoral evaluation of 7-chloro-4-quinolinylhydrazones derivatives.

Authors:  Raquel Carvalho Montenegro; Letícia Veras Lotufo; Manoel Odorico de Moraes; Cláudia do Ó Pessoa; Felipe Augusto Rocha Rodrigues; Marcelle de Lima Ferreira Bispo; Laura Nogueira de Faria Cardoso; Carlos Roland Kaiser; Marcus Vinícius Nora de Souza
Journal:  Med Chem       Date:  2011-11       Impact factor: 2.745

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Synthesis and in vitro antitubercular activity of a series of quinoline derivatives.

Authors:  Marcus V N de Souza; Karla C Pais; Carlos R Kaiser; Mônica A Peralta; Marcelle de L Ferreira; Maria C S Lourenço
Journal:  Bioorg Med Chem       Date:  2009-01-15       Impact factor: 3.641

4.  Synthesis and antitubercular activity of 7-chloro-4-quinolinylhydrazones derivatives.

Authors:  André L P Candéa; Marcelle de L Ferreira; Karla C Pais; Laura N de F Cardoso; Carlos R Kaiser; Maria das Graças M de O Henriques; Maria C S Lourenço; Flávio A F M Bezerra; Marcus V N de Souza
Journal:  Bioorg Med Chem Lett       Date:  2009-09-29       Impact factor: 2.823

5.  7-Chloro-4-[(E)-2-(4-methoxy-benzyl-idene)hydrazin-1-yl]quinoline monohydrate.

Authors:  Marcelle de Lima Ferreira; Marcus V N de Souza; R Alan Howie; Edward R T Tiekink; James L Wardell; Solange M S V Wardell
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-02-27

6.  7-Chloro-4-[(E)-2-(2-methoxy-benzyl-idene)hydrazin-1-yl]quinoline monohydrate.

Authors:  Marcus V N de Souza; R Alan Howie; Edward R T Tiekink; James L Wardell; Solange M S V Wardell; Carlos R Kaiser
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-02-27
  6 in total
  2 in total

1.  4-[(E)-2-(2-Chloro-benzyl-idene)hydrazin-1-yl]quinolin-1-ium chloride dihydrate.

Authors:  Edward R T Tiekink; Solange M S V Wardell; James L Wardell; Marcelle de Lima Ferreira; Marcus V N de Souza; Carlos R Kaiser
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-05-23

2.  7-Chloro-4-[(E)-2-(3,4,5-trimeth-oxy-benzyl-idene)hydrazin-1-yl]quinoline.

Authors:  Marcelle de Lima Ferreira; Marcus V N de Souza; Solange M S V Wardell; Edward R T Tiekink; James L Wardell
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-03-28
  2 in total

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