Literature DB >> 22606152

7-Chloro-4-[(E)-2-(3,4,5-trimeth-oxy-benzyl-idene)hydrazin-1-yl]quinoline.

Marcelle de Lima Ferreira, Marcus V N de Souza, Solange M S V Wardell, Edward R T Tiekink, James L Wardell.   

Abstract

In the title compound, C(19)H(18)ClN(3)O(3), the r.m.s. deviation through the 23 non-H and non-meth-oxy atoms is 0.088 Å, indicating a planar mol-ecule with the exception of the meth-oxy groups. One meth-oxy group, surrounded on either side by the other meth-oxy groups, is almost normal to the benzene ring to which it is connected [C-O-C(ar)-C(ar) torsion angle = 81.64 (15)°]. In the crystal, N-H⋯O, C-H⋯O and π-π inter-actions [between quinoline residues; centroid-centroid distance = 3.4375 (8) Å] link mol-ecules into a three-dimensional architecture.

Entities:  

Year:  2012        PMID: 22606152      PMCID: PMC3344149          DOI: 10.1107/S1600536812012755

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological activity, including anti-tubercular and anti-tumour activity, of compounds containing the quinolinyl nucleus, see: de Souza et al. (2009 ▶); Candea et al. (2009 ▶); Montenegro et al. (2012 ▶). For related structures, see: Howie et al. (2010 ▶); de Souza et al. (2010 ▶, 2012 ▶).

Experimental

Crystal data

C19H18ClN3O3 M = 371.81 Orthorhombic, a = 7.6338 (2) Å b = 15.5335 (4) Å c = 28.7960 (7) Å V = 3414.62 (15) Å3 Z = 8 Mo Kα radiation μ = 0.25 mm−1 T = 120 K 0.45 × 0.40 × 0.30 mm

Data collection

Bruker–Nonius Roper CCD camera on a κ-goniostat diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 2007 ▶) T min = 0.652, T max = 0.746 22673 measured reflections 3899 independent reflections 3353 reflections with I > 2σ(I) R int = 0.040

Refinement

R[F 2 > 2σ(F 2)] = 0.036 wR(F 2) = 0.101 S = 1.02 3899 reflections 241 parameters 1 restraint H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.30 e Å−3 Δρmin = −0.30 e Å−3 Data collection: COLLECT (Hooft, 1998 ▶); cell refinement: DENZO (Otwinowski & Minor, 1997 ▶) and COLLECT; data reduction: DENZO and COLLECT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and DIAMOND (Brandenburg, 2006 ▶); software used to prepare material for publication: publCIF (Westrip, 2010 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812012755/bt5858sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812012755/bt5858Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812012755/bt5858Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C19H18ClN3O3F(000) = 1552
Mr = 371.81Dx = 1.447 Mg m3
Orthorhombic, PbcaMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ac 2abCell parameters from 24183 reflections
a = 7.6338 (2) Åθ = 2.9–27.5°
b = 15.5335 (4) ŵ = 0.25 mm1
c = 28.7960 (7) ÅT = 120 K
V = 3414.62 (15) Å3Prism, colourless
Z = 80.45 × 0.40 × 0.30 mm
Bruker–Nonius Roper CCD camera on a κ-goniostat diffractometer3899 independent reflections
Radiation source: Bruker–Nonius FR591 rotating anode3353 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.040
Detector resolution: 9.091 pixels mm-1θmax = 27.5°, θmin = 3.0°
φ and ω scansh = −7→9
Absorption correction: multi-scan (SADABS; Sheldrick, 2007)k = −19→20
Tmin = 0.652, Tmax = 0.746l = −26→37
22673 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.036Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.101H atoms treated by a mixture of independent and constrained refinement
S = 1.02w = 1/[σ2(Fo2) + (0.0576P)2 + 1.3595P] where P = (Fo2 + 2Fc2)/3
3899 reflections(Δ/σ)max = 0.001
241 parametersΔρmax = 0.30 e Å3
1 restraintΔρmin = −0.30 e Å3
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl10.32570 (5)0.04598 (2)0.339654 (12)0.02558 (12)
O1−0.29202 (13)0.51292 (6)−0.01170 (3)0.0189 (2)
O2−0.26948 (13)0.42177 (6)−0.09143 (3)0.0185 (2)
O3−0.08960 (13)0.27516 (6)−0.09550 (3)0.0185 (2)
N10.03404 (15)0.32333 (7)0.28807 (4)0.0185 (2)
N20.06914 (15)0.25871 (7)0.14639 (4)0.0166 (2)
H2n0.123 (2)0.2115 (8)0.1386 (5)0.020*
N3−0.00092 (14)0.30964 (7)0.11233 (4)0.0160 (2)
C1−0.02236 (18)0.37484 (8)0.25478 (5)0.0183 (3)
H1−0.07380.42780.26410.022*
C2−0.01331 (18)0.35863 (9)0.20702 (5)0.0168 (3)
H2A−0.05790.39910.18530.020*
C30.06177 (17)0.28249 (8)0.19210 (4)0.0144 (3)
C40.12967 (17)0.22434 (8)0.22641 (4)0.0141 (3)
C50.21216 (17)0.14533 (9)0.21567 (5)0.0167 (3)
H50.22710.12950.18400.020*
C60.27103 (18)0.09103 (9)0.24970 (5)0.0177 (3)
H60.32680.03830.24190.021*
C70.24732 (18)0.11490 (9)0.29641 (5)0.0174 (3)
C80.16982 (18)0.19071 (9)0.30860 (5)0.0179 (3)
H80.15640.20520.34050.021*
C90.10938 (17)0.24777 (9)0.27378 (4)0.0152 (3)
C100.01112 (17)0.27774 (9)0.07136 (5)0.0157 (3)
H100.06560.22310.06790.019*
C11−0.05455 (17)0.32096 (9)0.02980 (4)0.0152 (3)
C12−0.14098 (17)0.40041 (8)0.03151 (4)0.0155 (3)
H12−0.15510.42970.06020.019*
C13−0.20597 (17)0.43605 (8)−0.00934 (5)0.0153 (3)
C14−0.18806 (17)0.39204 (9)−0.05162 (4)0.0157 (3)
C15−0.09928 (17)0.31355 (8)−0.05291 (4)0.0152 (3)
C16−0.03088 (18)0.27845 (8)−0.01241 (4)0.0160 (3)
H160.03180.2257−0.01350.019*
C17−0.31426 (19)0.55864 (9)0.03114 (5)0.0219 (3)
H17A−0.38870.52490.05210.033*
H17B−0.36960.61440.02500.033*
H17C−0.19970.56780.04560.033*
C18−0.1751 (2)0.48981 (9)−0.11456 (5)0.0225 (3)
H18A−0.15140.5364−0.09250.034*
H18B−0.24560.5120−0.14040.034*
H18C−0.06410.4673−0.12660.034*
C19−0.0276 (2)0.18760 (9)−0.09654 (5)0.0228 (3)
H19A0.09540.1860−0.08690.034*
H19B−0.03820.1648−0.12820.034*
H19C−0.09790.1524−0.07530.034*
U11U22U33U12U13U23
Cl10.0281 (2)0.0275 (2)0.02106 (19)0.00361 (14)−0.00295 (14)0.00990 (14)
O10.0219 (5)0.0175 (5)0.0174 (5)0.0038 (4)−0.0027 (4)0.0002 (4)
O20.0205 (5)0.0199 (5)0.0151 (5)−0.0036 (4)−0.0054 (4)0.0060 (4)
O30.0240 (5)0.0200 (5)0.0115 (4)0.0007 (4)−0.0005 (4)−0.0013 (4)
N10.0204 (6)0.0187 (6)0.0164 (5)−0.0006 (5)0.0001 (4)−0.0014 (5)
N20.0216 (6)0.0163 (5)0.0120 (5)0.0049 (5)−0.0013 (4)0.0017 (4)
N30.0168 (6)0.0177 (5)0.0135 (5)−0.0003 (4)−0.0015 (4)0.0039 (4)
C10.0193 (7)0.0155 (6)0.0201 (7)0.0008 (5)0.0019 (5)−0.0019 (5)
C20.0187 (7)0.0154 (6)0.0164 (6)−0.0006 (5)−0.0004 (5)0.0022 (5)
C30.0133 (6)0.0161 (6)0.0139 (6)−0.0025 (5)0.0002 (5)0.0008 (5)
C40.0133 (6)0.0157 (6)0.0133 (6)−0.0033 (5)−0.0001 (5)0.0013 (5)
C50.0168 (6)0.0185 (6)0.0148 (6)−0.0011 (5)−0.0010 (5)−0.0010 (5)
C60.0172 (7)0.0151 (6)0.0209 (7)−0.0001 (5)−0.0018 (5)−0.0004 (5)
C70.0161 (6)0.0191 (6)0.0169 (6)−0.0031 (5)−0.0030 (5)0.0057 (5)
C80.0186 (7)0.0222 (7)0.0128 (6)−0.0024 (5)0.0001 (5)0.0005 (5)
C90.0139 (6)0.0166 (6)0.0151 (6)−0.0028 (5)0.0002 (5)−0.0001 (5)
C100.0166 (6)0.0154 (6)0.0152 (6)0.0000 (5)−0.0006 (5)0.0009 (5)
C110.0134 (6)0.0184 (6)0.0139 (6)−0.0028 (5)−0.0008 (5)0.0019 (5)
C120.0162 (6)0.0174 (6)0.0129 (6)−0.0025 (5)−0.0012 (5)−0.0005 (5)
C130.0137 (6)0.0137 (6)0.0184 (7)−0.0018 (5)−0.0009 (5)0.0012 (5)
C140.0157 (6)0.0182 (6)0.0132 (6)−0.0030 (5)−0.0034 (5)0.0035 (5)
C150.0165 (6)0.0169 (6)0.0123 (6)−0.0040 (5)0.0004 (5)−0.0002 (5)
C160.0165 (6)0.0158 (6)0.0159 (6)−0.0009 (5)−0.0001 (5)0.0019 (5)
C170.0241 (7)0.0196 (7)0.0218 (7)0.0045 (6)−0.0039 (6)−0.0038 (6)
C180.0281 (8)0.0202 (7)0.0190 (7)−0.0047 (6)−0.0019 (6)0.0062 (6)
C190.0316 (8)0.0207 (7)0.0162 (6)0.0024 (6)0.0010 (6)−0.0032 (6)
Cl1—C71.7478 (13)C6—H60.9500
O1—C131.3646 (16)C7—C81.364 (2)
O1—C171.4335 (17)C8—C91.4156 (18)
O2—C141.3836 (15)C8—H80.9500
O2—C181.4422 (16)C10—C111.4609 (18)
O3—C151.3659 (15)C10—H100.9500
O3—C191.4403 (17)C11—C161.3949 (18)
N1—C11.3208 (18)C11—C121.4003 (18)
N1—C91.3704 (17)C12—C131.3915 (18)
N2—C31.3684 (16)C12—H120.9500
N2—N31.3687 (15)C13—C141.4030 (18)
N2—H2n0.871 (9)C14—C151.3954 (19)
N3—C101.2829 (17)C15—C161.3893 (18)
C1—C21.4001 (19)C16—H160.9500
C1—H10.9500C17—H17A0.9800
C2—C31.3826 (19)C17—H17B0.9800
C2—H2A0.9500C17—H17C0.9800
C3—C41.4355 (18)C18—H18A0.9800
C4—C51.4136 (19)C18—H18B0.9800
C4—C91.4202 (17)C18—H18C0.9800
C5—C61.3689 (19)C19—H19A0.9800
C5—H50.9500C19—H19B0.9800
C6—C71.4068 (19)C19—H19C0.9800
C13—O1—C17116.59 (10)C11—C10—H10118.3
C14—O2—C18113.76 (10)C16—C11—C12120.60 (12)
C15—O3—C19116.66 (10)C16—C11—C10116.86 (12)
C1—N1—C9115.96 (12)C12—C11—C10122.53 (12)
C3—N2—N3121.14 (11)C13—C12—C11119.26 (12)
C3—N2—H2n119.7 (11)C13—C12—H12120.4
N3—N2—H2n119.1 (11)C11—C12—H12120.4
C10—N3—N2114.06 (11)O1—C13—C12124.19 (12)
N1—C1—C2126.01 (13)O1—C13—C14115.47 (11)
N1—C1—H1117.0C12—C13—C14120.33 (12)
C2—C1—H1117.0O2—C14—C15119.20 (12)
C3—C2—C1118.65 (12)O2—C14—C13120.84 (12)
C3—C2—H2A120.7C15—C14—C13119.75 (12)
C1—C2—H2A120.7O3—C15—C16124.20 (12)
N2—C3—C2123.15 (12)O3—C15—C14115.58 (11)
N2—C3—C4118.51 (12)C16—C15—C14120.21 (12)
C2—C3—C4118.30 (12)C15—C16—C11119.79 (12)
C5—C4—C9118.76 (12)C15—C16—H16120.1
C5—C4—C3123.82 (12)C11—C16—H16120.1
C9—C4—C3117.41 (12)O1—C17—H17A109.5
C6—C5—C4121.64 (12)O1—C17—H17B109.5
C6—C5—H5119.2H17A—C17—H17B109.5
C4—C5—H5119.2O1—C17—H17C109.5
C5—C6—C7118.67 (12)H17A—C17—H17C109.5
C5—C6—H6120.7H17B—C17—H17C109.5
C7—C6—H6120.7O2—C18—H18A109.5
C8—C7—C6121.97 (12)O2—C18—H18B109.5
C8—C7—Cl1119.60 (10)H18A—C18—H18B109.5
C6—C7—Cl1118.40 (11)O2—C18—H18C109.5
C7—C8—C9119.98 (12)H18A—C18—H18C109.5
C7—C8—H8120.0H18B—C18—H18C109.5
C9—C8—H8120.0O3—C19—H19A109.5
N1—C9—C8117.41 (12)O3—C19—H19B109.5
N1—C9—C4123.62 (12)H19A—C19—H19B109.5
C8—C9—C4118.97 (12)O3—C19—H19C109.5
N3—C10—C11123.46 (12)H19A—C19—H19C109.5
N3—C10—H10118.3H19B—C19—H19C109.5
C3—N2—N3—C10−177.97 (12)N2—N3—C10—C11−179.92 (12)
C9—N1—C1—C20.7 (2)N3—C10—C11—C16179.59 (12)
N1—C1—C2—C3−0.4 (2)N3—C10—C11—C12−1.8 (2)
N3—N2—C3—C2−0.9 (2)C16—C11—C12—C131.09 (19)
N3—N2—C3—C4176.90 (11)C10—C11—C12—C13−177.49 (12)
C1—C2—C3—N2176.69 (12)C17—O1—C13—C120.29 (18)
C1—C2—C3—C4−1.07 (19)C17—O1—C13—C14179.15 (12)
N2—C3—C4—C53.29 (19)C11—C12—C13—O1−179.96 (12)
C2—C3—C4—C5−178.84 (12)C11—C12—C13—C141.23 (19)
N2—C3—C4—C9−175.68 (11)C18—O2—C14—C15−103.67 (14)
C2—C3—C4—C92.19 (18)C18—O2—C14—C1381.64 (15)
C9—C4—C5—C60.58 (19)O1—C13—C14—O2−6.46 (18)
C3—C4—C5—C6−178.38 (13)C12—C13—C14—O2172.44 (12)
C4—C5—C6—C70.3 (2)O1—C13—C14—C15178.87 (11)
C5—C6—C7—C8−0.9 (2)C12—C13—C14—C15−2.22 (19)
C5—C6—C7—Cl1−179.08 (10)C19—O3—C15—C169.53 (19)
C6—C7—C8—C90.4 (2)C19—O3—C15—C14−169.05 (12)
Cl1—C7—C8—C9178.63 (10)O2—C14—C15—O34.77 (18)
C1—N1—C9—C8−179.44 (12)C13—C14—C15—O3179.53 (11)
C1—N1—C9—C40.65 (19)O2—C14—C15—C16−173.87 (12)
C7—C8—C9—N1−179.42 (12)C13—C14—C15—C160.88 (19)
C7—C8—C9—C40.50 (19)O3—C15—C16—C11−177.10 (12)
C5—C4—C9—N1178.92 (12)C14—C15—C16—C111.4 (2)
C3—C4—C9—N1−2.05 (19)C12—C11—C16—C15−2.4 (2)
C5—C4—C9—C8−0.99 (18)C10—C11—C16—C15176.23 (12)
C3—C4—C9—C8178.03 (12)
D—H···AD—HH···AD···AD—H···A
N2—H2n···O3i0.87 (1)2.53 (2)3.0349 (15)118 (1)
C19—H19B···N1ii0.982.483.3602 (18)149
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N2—H2n⋯O3i0.87 (1)2.53 (2)3.0349 (15)118 (1)
C19—H19B⋯N1ii0.982.483.3602 (18)149

Symmetry codes: (i) ; (ii) .

  5 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Synthesis and in vitro antitubercular activity of a series of quinoline derivatives.

Authors:  Marcus V N de Souza; Karla C Pais; Carlos R Kaiser; Mônica A Peralta; Marcelle de L Ferreira; Maria C S Lourenço
Journal:  Bioorg Med Chem       Date:  2009-01-15       Impact factor: 3.641

3.  Synthesis and antitubercular activity of 7-chloro-4-quinolinylhydrazones derivatives.

Authors:  André L P Candéa; Marcelle de L Ferreira; Karla C Pais; Laura N de F Cardoso; Carlos R Kaiser; Maria das Graças M de O Henriques; Maria C S Lourenço; Flávio A F M Bezerra; Marcus V N de Souza
Journal:  Bioorg Med Chem Lett       Date:  2009-09-29       Impact factor: 2.823

4.  7-Chloro-4-[(E)-2-(2-methoxy-benzyl-idene)hydrazin-1-yl]quinoline monohydrate.

Authors:  Marcus V N de Souza; R Alan Howie; Edward R T Tiekink; James L Wardell; Solange M S V Wardell; Carlos R Kaiser
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-02-27

5.  7-Chloro-4-[(E)-2-(2,5-dimeth-oxy-benzyl-idene)hydrazin-1-yl]quinoline.

Authors:  Marcus V N de Souza; Marcelle de Lima Ferreira; Solange M S V Wardell; Edward R T Tiekink; James L Wardell
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-03-31
  5 in total
  1 in total

1.  4-[(E)-2-(2-Chloro-benzyl-idene)hydrazin-1-yl]quinolin-1-ium chloride dihydrate.

Authors:  Edward R T Tiekink; Solange M S V Wardell; James L Wardell; Marcelle de Lima Ferreira; Marcus V N de Souza; Carlos R Kaiser
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-05-23
  1 in total

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