Literature DB >> 21525787

Morphogen gradient formation and action: insights from studying Bicoid protein degradation.

Junbo Liu1, Feng He, Jun Ma.   

Abstract

In a recent publication, we identified a novel F-box protein, encoded by fates-shifted (fsd), that plays a role in targeting Bcd for ubiquitination and degradation. Our analysis of mutant Drosophila embryos suggests that Bcd protein degradation is important for proper gradient formation and developmental fate specification. Here we describe further experiments that lead to an estimate of Bcd half-life, < 15 min, in embryos during the time of gradient formation. We use our findings to evaluate different models of Bcd gradient formation. With this new estimate, we simulate the Bcd gradient formation process in our own biologically realistic 2-D model. Finally, we discuss the role of Bcd-encoded positional information in controlling the positioning and precision of developmental decisions.

Entities:  

Mesh:

Substances:

Year:  2011        PMID: 21525787      PMCID: PMC3225767          DOI: 10.4161/fly.5.3.15837

Source DB:  PubMed          Journal:  Fly (Austin)        ISSN: 1933-6934            Impact factor:   2.160


  51 in total

1.  Shaping a morphogen gradient for positional precision.

Authors:  Feng He; Timothy E Saunders; Ying Wen; David Cheung; Renjie Jiao; Pieter Rein ten Wolde; Martin Howard; Jun Ma
Journal:  Biophys J       Date:  2010-08-04       Impact factor: 4.033

2.  Role of spatial averaging in the precision of gene expression patterns.

Authors:  Thorsten Erdmann; Martin Howard; Pieter Rein ten Wolde
Journal:  Phys Rev Lett       Date:  2009-12-17       Impact factor: 9.161

3.  Positional information and patterning revisited.

Authors:  Lewis Wolpert
Journal:  J Theor Biol       Date:  2010-10-31       Impact factor: 2.691

Review 4.  Modelling the Bicoid gradient.

Authors:  Oliver Grimm; Mathieu Coppey; Eric Wieschaus
Journal:  Development       Date:  2010-07       Impact factor: 6.868

5.  High mobility of bicoid captured by fluorescence correlation spectroscopy: implication for the rapid establishment of its gradient.

Authors:  Asmahan Abu-Arish; Aude Porcher; Anna Czerwonka; Nathalie Dostatni; Cécile Fradin
Journal:  Biophys J       Date:  2010-08-09       Impact factor: 4.033

6.  The time to measure positional information: maternal hunchback is required for the synchrony of the Bicoid transcriptional response at the onset of zygotic transcription.

Authors:  Aude Porcher; Asmahan Abu-Arish; Sébastien Huart; Baptiste Roelens; Cécile Fradin; Nathalie Dostatni
Journal:  Development       Date:  2010-08       Impact factor: 6.868

7.  Artificial selection on egg size perturbs early pattern formation in Drosophila melanogaster.

Authors:  Cecelia M Miles; Susan E Lott; Cris L Luengo Hendriks; Michael Z Ludwig; Calvin L Williams; Martin Kreitman
Journal:  Evolution       Date:  2011-01       Impact factor: 3.694

8.  A two-dimensional simulation model of the bicoid gradient in Drosophila.

Authors:  Jingyuan Deng; Wei Wang; Long Jason Lu; Jun Ma
Journal:  PLoS One       Date:  2010-04-21       Impact factor: 3.240

9.  Distance measurements via the morphogen gradient of Bicoid in Drosophila embryos.

Authors:  Feng He; Ying Wen; David Cheung; Jingyuan Deng; Long J Lu; Renjie Jiao; Jun Ma
Journal:  BMC Dev Biol       Date:  2010-08-02       Impact factor: 1.978

10.  Fates-shifted is an F-box protein that targets Bicoid for degradation and regulates developmental fate determination in Drosophila embryos.

Authors:  Junbo Liu; Jun Ma
Journal:  Nat Cell Biol       Date:  2010-12-19       Impact factor: 28.824

View more
  14 in total

Review 1.  Transcriptional activators and activation mechanisms.

Authors:  Jun Ma
Journal:  Protein Cell       Date:  2011-12-17       Impact factor: 14.870

2.  Evaluating the Drosophila Bicoid morphogen gradient system through dissecting the noise in transcriptional bursts.

Authors:  Feng He; Jie Ren; Wei Wang; Jun Ma
Journal:  Bioinformatics       Date:  2012-02-02       Impact factor: 6.937

3.  Scaling of the Bicoid morphogen gradient by a volume-dependent production rate.

Authors:  David Cheung; Cecelia Miles; Martin Kreitman; Jun Ma
Journal:  Development       Date:  2011-05-25       Impact factor: 6.868

4.  Modulation of temporal dynamics of gene transcription by activator potency in the Drosophila embryo.

Authors:  Junbo Liu; Jun Ma
Journal:  Development       Date:  2015-09-22       Impact factor: 6.868

5.  Time to move on: Modeling transcription dynamics during an embryonic transition away from maternal control.

Authors:  Junbo Liu; Yanyu Xiao; Tongli Zhang; Jun Ma
Journal:  Fly (Austin)       Date:  2016-05-12       Impact factor: 2.160

6.  Adaptation of the length scale and amplitude of the Bicoid gradient profile to achieve robust patterning in abnormally large Drosophila melanogaster embryos.

Authors:  David Cheung; Cecelia Miles; Martin Kreitman; Jun Ma
Journal:  Development       Date:  2013-11-27       Impact factor: 6.868

7.  Quantifying Temperature Compensation of Bicoid Gradients with a Fast T-Tunable Microfluidic Device.

Authors:  Hongcun Zhu; Yeping Cui; Chunxiong Luo; Feng Liu
Journal:  Biophys J       Date:  2020-08-12       Impact factor: 4.033

8.  Bicoid signal extraction with a selection of parametric and nonparametric signal processing techniques.

Authors:  Zara Ghodsi; Emmanuel Sirimal Silva; Hossein Hassani
Journal:  Genomics Proteomics Bioinformatics       Date:  2015-07-18       Impact factor: 7.691

9.  Uncovering a dynamic feature of the transcriptional regulatory network for anterior-posterior patterning in the Drosophila embryo.

Authors:  Junbo Liu; Jun Ma
Journal:  PLoS One       Date:  2013-04-30       Impact factor: 3.240

10.  Probing the impact of temperature on molecular events in a developmental system.

Authors:  David Cheung; Jun Ma
Journal:  Sci Rep       Date:  2015-08-19       Impact factor: 4.379

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.