Literature DB >> 20682246

Shaping a morphogen gradient for positional precision.

Feng He1, Timothy E Saunders, Ying Wen, David Cheung, Renjie Jiao, Pieter Rein ten Wolde, Martin Howard, Jun Ma.   

Abstract

Morphogen gradients, which provide positional information to cells in a developing tissue, could in principle adopt any nonuniform profile. To our knowledge, how the profile of a morphogen gradient affects positional precision has not been well studied experimentally. Here, we compare the positional precision provided by the Drosophila morphogenetic protein Bicoid (Bcd) in wild-type (wt) embryos with embryos lacking an interacting cofactor. The Bcd gradient in the latter case exhibits decreased positional precision around mid-embryo compared with its wt counterpart. The domain boundary of Hunchback (Hb), a target activated by Bcd, becomes more variable in mutant embryos. By considering embryo-to-embryo, internal, and measurement fluctuations, we dissect mathematically the relevant sources of fluctuations that contribute to the error in positional information. Using this approach, we show that the defect in Hb boundary positioning in mutant embryos is directly reflective of an altered Bcd gradient profile with increasing flatness toward mid-embryo. Furthermore, we find that noise in the Bcd input signal is dominated by internal fluctuations but, due to time and spatial averaging, the spatial precision of the Hb boundary is primarily affected by embryo-to-embryo variations. Our results demonstrate that the positional information provided by the wt Bcd gradient profile is highly precise and necessary for patterning precision. 2010 Biophysical Society. Published by Elsevier Inc. All rights reserved.

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Year:  2010        PMID: 20682246      PMCID: PMC2913175          DOI: 10.1016/j.bpj.2010.04.073

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  43 in total

1.  Self-enhanced ligand degradation underlies robustness of morphogen gradients.

Authors:  Avigdor Eldar; Dalia Rosin; Ben-Zion Shilo; Naama Barkai
Journal:  Dev Cell       Date:  2003-10       Impact factor: 12.270

2.  Dynamic control of positional information in the early Drosophila embryo.

Authors:  Johannes Jaeger; Svetlana Surkova; Maxim Blagov; Hilde Janssens; David Kosman; Konstantin N Kozlov; Ekaterina Myasnikova; Carlos E Vanario-Alonso; Maria Samsonova; David H Sharp; John Reinitz
Journal:  Nature       Date:  2004-07-15       Impact factor: 49.962

3.  Role of spatial averaging in the precision of gene expression patterns.

Authors:  Thorsten Erdmann; Martin Howard; Pieter Rein ten Wolde
Journal:  Phys Rev Lett       Date:  2009-12-17       Impact factor: 9.161

4.  Morphogen profiles can be optimized to buffer against noise.

Authors:  Timothy E Saunders; Martin Howard
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2009-10-02

5.  Establishment of developmental precision and proportions in the early Drosophila embryo.

Authors:  Bahram Houchmandzadeh; Eric Wieschaus; Stanislas Leibler
Journal:  Nature       Date:  2002-02-14       Impact factor: 49.962

6.  A gradient of bicoid protein in Drosophila embryos.

Authors:  W Driever; C Nüsslein-Volhard
Journal:  Cell       Date:  1988-07-01       Impact factor: 41.582

7.  Positional information and the spatial pattern of cellular differentiation.

Authors:  L Wolpert
Journal:  J Theor Biol       Date:  1969-10       Impact factor: 2.691

8.  Robustness of the BMP morphogen gradient in Drosophila embryonic patterning.

Authors:  Avigdor Eldar; Ruslan Dorfman; Daniel Weiss; Hilary Ashe; Ben-Zion Shilo; Naama Barkai
Journal:  Nature       Date:  2002-09-19       Impact factor: 49.962

Review 9.  Seeing is believing: the bicoid morphogen gradient matures.

Authors:  Anne Ephrussi; Daniel St Johnston
Journal:  Cell       Date:  2004-01-23       Impact factor: 41.582

10.  Canalization of gene expression in the Drosophila blastoderm by gap gene cross regulation.

Authors:  Svetlana Surkova; Alexander V Spirov; Vitaly V Gursky; Hilde Janssens; Ah-Ram Kim; Ovidiu Radulescu; Carlos E Vanario-Alonso; David H Sharp; Maria Samsonova; John Reinitz
Journal:  PLoS Biol       Date:  2009-03-10       Impact factor: 8.029

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  25 in total

Review 1.  Transcriptional activators and activation mechanisms.

Authors:  Jun Ma
Journal:  Protein Cell       Date:  2011-12-17       Impact factor: 14.870

2.  The effect of the signalling scheme on the robustness of pattern formation in development.

Authors:  Hye-Won Kang; Likun Zheng; Hans G Othmer
Journal:  Interface Focus       Date:  2012-03-21       Impact factor: 3.906

3.  Evaluating the Drosophila Bicoid morphogen gradient system through dissecting the noise in transcriptional bursts.

Authors:  Feng He; Jie Ren; Wei Wang; Jun Ma
Journal:  Bioinformatics       Date:  2012-02-02       Impact factor: 6.937

4.  Spatiotemporal analysis of different mechanisms for interpreting morphogen gradients.

Authors:  David M Richards; Timothy E Saunders
Journal:  Biophys J       Date:  2015-04-21       Impact factor: 4.033

5.  Morphogen gradient formation and action: insights from studying Bicoid protein degradation.

Authors:  Junbo Liu; Feng He; Jun Ma
Journal:  Fly (Austin)       Date:  2011-07-01       Impact factor: 2.160

6.  Robust and precise morphogen-mediated patterning: trade-offs, constraints and mechanisms.

Authors:  Wing-Cheong Lo; Shaohua Zhou; Frederic Y-M Wan; Arthur D Lander; Qing Nie
Journal:  J R Soc Interface       Date:  2015-01-06       Impact factor: 4.118

7.  Scaling of the Bicoid morphogen gradient by a volume-dependent production rate.

Authors:  David Cheung; Cecelia Miles; Martin Kreitman; Jun Ma
Journal:  Development       Date:  2011-05-25       Impact factor: 6.868

8.  Adaptation of the length scale and amplitude of the Bicoid gradient profile to achieve robust patterning in abnormally large Drosophila melanogaster embryos.

Authors:  David Cheung; Cecelia Miles; Martin Kreitman; Jun Ma
Journal:  Development       Date:  2013-11-27       Impact factor: 6.868

9.  The role of Bicoid cooperative binding in the patterning of sharp borders in Drosophila melanogaster.

Authors:  Francisco J P Lopes; Alexander V Spirov; Paulo M Bisch
Journal:  Dev Biol       Date:  2012-07-25       Impact factor: 3.582

10.  Distance measurements via the morphogen gradient of Bicoid in Drosophila embryos.

Authors:  Feng He; Ying Wen; David Cheung; Jingyuan Deng; Long J Lu; Renjie Jiao; Jun Ma
Journal:  BMC Dev Biol       Date:  2010-08-02       Impact factor: 1.978

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