Literature DB >> 21613328

Scaling of the Bicoid morphogen gradient by a volume-dependent production rate.

David Cheung1, Cecelia Miles, Martin Kreitman, Jun Ma.   

Abstract

An important feature of development is the formation of patterns that are proportional to the overall size of the embryo. But how such proportionality, or scaling, is achieved mechanistically remains poorly understood. Furthermore, it is currently unclear whether organisms utilize similar or distinct mechanisms to achieve scaling within a species and between species. Here we investigate within-species scaling mechanisms for anterior-posterior (A-P) patterning in Drosophila melanogaster, focusing specifically on the properties of the Bicoid (Bcd) morphogen gradient. Using embryos from lines artificially selected for large and small egg volume, we show that large embryos have higher nuclear Bcd concentrations in the anterior than small embryos. This anterior difference leads to scaling properties of the Bcd gradient profiles: in broad regions of the large and small embryos along the A-P axis, normalizing their positions to embryo length reduces the differences in both the nuclear Bcd concentrations and Bcd-encoded positional information. We further trace the origin of Bcd gradient scaling by showing directly that large embryos have more maternally deposited bcd mRNA than small embryos. Our results suggest a simple model for how within-species Bcd gradient scaling can be achieved. In this model, the Bcd production rate, which is dependent on the total number of bcd mRNA molecules in the anterior, is scaled with embryo volume.

Entities:  

Mesh:

Substances:

Year:  2011        PMID: 21613328      PMCID: PMC3109599          DOI: 10.1242/dev.064402

Source DB:  PubMed          Journal:  Development        ISSN: 0950-1991            Impact factor:   6.868


  50 in total

Review 1.  The evolutionary genetics of canalization.

Authors:  Thomas Flatt
Journal:  Q Rev Biol       Date:  2005-09       Impact factor: 4.875

2.  Removal of background signal from in situ data on the expression of segmentation genes in Drosophila.

Authors:  Ekaterina Myasnikova; Maria Samsonova; David Kosman; John Reinitz
Journal:  Dev Genes Evol       Date:  2005-02-12       Impact factor: 0.900

Review 3.  Filtering transcriptional noise during development: concepts and mechanisms.

Authors:  Alfonso Martinez Arias; Penelope Hayward
Journal:  Nat Rev Genet       Date:  2006-01       Impact factor: 53.242

4.  Localization of bicoid mRNA in late oocytes is maintained by continual active transport.

Authors:  Timothy T Weil; Kevin M Forrest; Elizabeth R Gavis
Journal:  Dev Cell       Date:  2006-08       Impact factor: 12.270

Review 5.  Morpheus unbound: reimagining the morphogen gradient.

Authors:  Arthur D Lander
Journal:  Cell       Date:  2007-01-26       Impact factor: 41.582

6.  Cooperative DNA-binding by Bicoid provides a mechanism for threshold-dependent gene activation in the Drosophila embryo.

Authors:  D S Burz; R Rivera-Pomar; H Jäckle; S D Hanes
Journal:  EMBO J       Date:  1998-10-15       Impact factor: 11.598

7.  Diffusion and scaling during early embryonic pattern formation.

Authors:  Thomas Gregor; William Bialek; Rob R de Ruyter van Steveninck; David W Tank; Eric F Wieschaus
Journal:  Proc Natl Acad Sci U S A       Date:  2005-12-13       Impact factor: 11.205

8.  The gradient morphogen bicoid is a concentration-dependent transcriptional activator.

Authors:  G Struhl; K Struhl; P M Macdonald
Journal:  Cell       Date:  1989-06-30       Impact factor: 41.582

9.  Rapid preparation of a panel of polyclonal antibodies to Drosophila segmentation proteins.

Authors:  D Kosman; S Small; J Reinitz
Journal:  Dev Genes Evol       Date:  1998-07       Impact factor: 0.900

10.  The role of localization of bicoid RNA in organizing the anterior pattern of the Drosophila embryo.

Authors:  T Berleth; M Burri; G Thoma; D Bopp; S Richstein; G Frigerio; M Noll; C Nüsslein-Volhard
Journal:  EMBO J       Date:  1988-06       Impact factor: 11.598

View more
  29 in total

Review 1.  Transcriptional activators and activation mechanisms.

Authors:  Jun Ma
Journal:  Protein Cell       Date:  2011-12-17       Impact factor: 14.870

2.  Evaluating the Drosophila Bicoid morphogen gradient system through dissecting the noise in transcriptional bursts.

Authors:  Feng He; Jie Ren; Wei Wang; Jun Ma
Journal:  Bioinformatics       Date:  2012-02-02       Impact factor: 6.937

Review 3.  Mechanisms of scaling in pattern formation.

Authors:  David M Umulis; Hans G Othmer
Journal:  Development       Date:  2013-12       Impact factor: 6.868

4.  Maternal origins of developmental reproducibility.

Authors:  Mariela D Petkova; Shawn C Little; Feng Liu; Thomas Gregor
Journal:  Curr Biol       Date:  2014-05-22       Impact factor: 10.834

5.  Morphogen gradient formation and action: insights from studying Bicoid protein degradation.

Authors:  Junbo Liu; Feng He; Jun Ma
Journal:  Fly (Austin)       Date:  2011-07-01       Impact factor: 2.160

6.  Two-Exponential Models of Gene Expression Patterns for Noisy Experimental Data.

Authors:  Theodore Alexandrov; Nina Golyandina; David Holloway; Alex Shlemov; Alexander Spirov
Journal:  J Comput Biol       Date:  2018-08-17       Impact factor: 1.479

7.  Size-dependent regulation of dorsal-ventral patterning in the early Drosophila embryo.

Authors:  Mayra Garcia; Marcos Nahmad; Gregory T Reeves; Angelike Stathopoulos
Journal:  Dev Biol       Date:  2013-06-22       Impact factor: 3.582

8.  Scaling a Dpp Morphogen Gradient through Feedback Control of Receptors and Co-receptors.

Authors:  Yilun Zhu; Yuchi Qiu; Weitao Chen; Qing Nie; Arthur D Lander
Journal:  Dev Cell       Date:  2020-06-22       Impact factor: 12.270

9.  Time to move on: Modeling transcription dynamics during an embryonic transition away from maternal control.

Authors:  Junbo Liu; Yanyu Xiao; Tongli Zhang; Jun Ma
Journal:  Fly (Austin)       Date:  2016-05-12       Impact factor: 2.160

10.  Adaptation of the length scale and amplitude of the Bicoid gradient profile to achieve robust patterning in abnormally large Drosophila melanogaster embryos.

Authors:  David Cheung; Cecelia Miles; Martin Kreitman; Jun Ma
Journal:  Development       Date:  2013-11-27       Impact factor: 6.868

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.