Literature DB >> 21202548

Benzyl 3-[(E)-furfuryl-idene]dithio-carbazate.

Shang Shan1, Yu-Liang Tian, Shan-Heng Wang, Wen-Long Wang, Ying-Li Xu.   

Abstract

In the title compound, C(13)H(12)N(2)OS(2), the mol-ecule assumes an E configuration, with the furan ring and dithio-carbazate units located on opposite sides of the N=C double bond. In the crystal structure, mol-ecules are linked via two inter-molecular N-H⋯S hydrogen bonds to form centrosymmetric dimers.

Entities:  

Year:  2008        PMID: 21202548      PMCID: PMC2961401          DOI: 10.1107/S160053680801307X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background, see: Okabe et al. (1993 ▶). For related structures, see: Shan et al. (2006 ▶, 2008 ▶). For the synthesis and background, see: Hu et al. (2001 ▶).

Experimental

Crystal data

C13H12N2OS2 M = 276.37 Triclinic, a = 4.8331 (11) Å b = 12.040 (3) Å c = 12.549 (3) Å α = 108.203 (7)° β = 99.704 (9)° γ = 97.910 (8)° V = 669.5 (3) Å3 Z = 2 Mo Kα radiation μ = 0.39 mm−1 T = 295 (2) K 0.42 × 0.36 × 0.32 mm

Data collection

Rigaku R-AXIS RAPID IP diffractometer Absorption correction: none 7084 measured reflections 2324 independent reflections 1799 reflections with I > 2σ(I) R int = 0.024

Refinement

R[F 2 > 2σ(F 2)] = 0.033 wR(F 2) = 0.090 S = 1.07 2324 reflections 163 parameters H-atom parameters constrained Δρmax = 0.14 e Å−3 Δρmin = −0.17 e Å−3 Data collection: PROCESS-AUTO (Rigaku, 1998 ▶); cell refinement: PROCESS-AUTO; data reduction: CrystalStructure (Rigaku/MSC, 2002 ▶); program(s) used to solve structure: SIR92 (Altomare et al., 1993 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S160053680801307X/hb2727sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S160053680801307X/hb2727Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C13H12N2OS2Z = 2
Mr = 276.37F000 = 288
Triclinic, P1Dx = 1.371 Mg m3
Hall symbol: -P 1Mo Kα radiation λ = 0.71073 Å
a = 4.8331 (11) ÅCell parameters from 3836 reflections
b = 12.040 (3) Åθ = 1.8–25.0º
c = 12.549 (3) ŵ = 0.39 mm1
α = 108.203 (7)ºT = 295 (2) K
β = 99.704 (9)ºPrism, yellow
γ = 97.910 (8)º0.42 × 0.36 × 0.32 mm
V = 669.5 (3) Å3
Rigaku R-AXIS RAPID IP diffractometer2324 independent reflections
Radiation source: fine-focus sealed tube1799 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.024
Detector resolution: 10.00 pixels mm-1θmax = 25.0º
T = 295(2) Kθmin = 1.8º
ω scansh = −5→5
Absorption correction: nonek = −14→13
7084 measured reflectionsl = −14→14
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.033H-atom parameters constrained
wR(F2) = 0.090  w = 1/[σ2(Fo2) + (0.0446P)2 + 0.0525P] where P = (Fo2 + 2Fc2)/3
S = 1.07(Δ/σ)max < 0.001
2324 reflectionsΔρmax = 0.14 e Å3
163 parametersΔρmin = −0.17 e Å3
Primary atom site location: structure-invariant direct methodsExtinction correction: none
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S11.03544 (13)−0.02756 (5)0.32307 (4)0.0669 (2)
S20.84716 (12)0.18647 (4)0.27822 (4)0.06143 (19)
O10.4143 (3)0.41877 (12)0.56065 (11)0.0662 (4)
N10.6602 (3)0.22213 (13)0.48240 (13)0.0533 (4)
N20.7837 (3)0.12309 (13)0.45371 (13)0.0569 (4)
H2N0.79430.08070.49760.068*
C10.4147 (4)0.33502 (16)0.61307 (15)0.0527 (5)
C20.2854 (5)0.36601 (19)0.70185 (17)0.0640 (5)
H20.25920.32420.75160.077*
C30.1967 (5)0.47383 (19)0.70534 (19)0.0711 (6)
H30.10110.51680.75740.085*
C40.2776 (5)0.50159 (19)0.61914 (19)0.0720 (6)
H40.24520.56870.60110.086*
C50.5457 (4)0.23599 (17)0.56929 (16)0.0548 (5)
H50.54790.17930.60540.066*
C60.8870 (4)0.09223 (16)0.35868 (15)0.0510 (5)
C71.0091 (5)0.11971 (19)0.15901 (17)0.0647 (5)
H7A1.21070.12290.18720.078*
H7B0.91450.03680.11890.078*
C80.9740 (4)0.19026 (17)0.07913 (16)0.0560 (5)
C90.7422 (5)0.1560 (2)−0.01297 (19)0.0764 (6)
H90.60640.0877−0.02580.092*
C100.7056 (7)0.2192 (3)−0.0861 (2)0.0916 (8)
H100.54690.1939−0.14760.110*
C110.9002 (8)0.3183 (3)−0.0689 (3)0.0931 (9)
H110.87500.3616−0.11820.112*
C121.1348 (7)0.3554 (2)0.0210 (3)0.0979 (9)
H121.26950.42350.03250.117*
C131.1712 (5)0.2906 (2)0.0954 (2)0.0795 (6)
H131.33060.31590.15650.095*
U11U22U33U12U13U23
S10.0906 (4)0.0557 (3)0.0675 (3)0.0399 (3)0.0222 (3)0.0265 (2)
S20.0790 (4)0.0596 (3)0.0632 (3)0.0369 (3)0.0240 (3)0.0313 (2)
O10.0945 (11)0.0586 (8)0.0640 (8)0.0373 (7)0.0296 (7)0.0313 (7)
N10.0610 (10)0.0490 (9)0.0560 (9)0.0254 (8)0.0127 (8)0.0206 (7)
N20.0722 (11)0.0519 (9)0.0595 (9)0.0302 (8)0.0188 (8)0.0275 (7)
C10.0573 (12)0.0517 (11)0.0549 (10)0.0174 (9)0.0118 (9)0.0244 (9)
C20.0741 (14)0.0667 (13)0.0656 (12)0.0244 (11)0.0285 (11)0.0316 (10)
C30.0787 (15)0.0672 (14)0.0736 (14)0.0314 (12)0.0303 (12)0.0187 (11)
C40.0920 (17)0.0575 (13)0.0773 (14)0.0389 (12)0.0243 (12)0.0253 (11)
C50.0623 (12)0.0526 (11)0.0585 (11)0.0213 (9)0.0138 (9)0.0275 (9)
C60.0525 (11)0.0483 (11)0.0547 (10)0.0173 (9)0.0079 (8)0.0201 (8)
C70.0737 (14)0.0654 (13)0.0702 (12)0.0341 (11)0.0265 (11)0.0303 (10)
C80.0629 (13)0.0559 (12)0.0600 (11)0.0263 (10)0.0251 (10)0.0229 (9)
C90.0843 (17)0.0717 (15)0.0764 (14)0.0172 (12)0.0151 (13)0.0309 (12)
C100.117 (2)0.100 (2)0.0697 (15)0.0416 (18)0.0182 (14)0.0385 (15)
C110.132 (3)0.103 (2)0.0922 (19)0.065 (2)0.0647 (19)0.0602 (17)
C120.103 (2)0.0752 (17)0.142 (3)0.0230 (16)0.062 (2)0.0551 (18)
C130.0761 (16)0.0753 (16)0.0940 (16)0.0195 (13)0.0238 (13)0.0346 (13)
S1—C61.6686 (18)C5—H50.9300
S2—C61.7477 (19)C7—C81.507 (3)
S2—C71.820 (2)C7—H7A0.9700
O1—C41.363 (2)C7—H7B0.9700
O1—C11.365 (2)C8—C131.369 (3)
N1—C51.280 (2)C8—C91.378 (3)
N1—N21.381 (2)C9—C101.369 (3)
N2—C61.336 (2)C9—H90.9300
N2—H2N0.8600C10—C111.348 (4)
C1—C21.345 (3)C10—H100.9300
C1—C51.428 (3)C11—C121.368 (4)
C2—C31.412 (3)C11—H110.9300
C2—H20.9300C12—C131.395 (4)
C3—C41.329 (3)C12—H120.9300
C3—H30.9300C13—H130.9300
C4—H40.9300
C6—S2—C7102.07 (9)C8—C7—S2107.15 (13)
C4—O1—C1106.12 (15)C8—C7—H7A110.3
C5—N1—N2114.92 (16)S2—C7—H7A110.3
C6—N2—N1120.90 (15)C8—C7—H7B110.3
C6—N2—H2N119.6S2—C7—H7B110.3
N1—N2—H2N119.6H7A—C7—H7B108.5
C2—C1—O1109.46 (17)C13—C8—C9117.6 (2)
C2—C1—C5131.99 (18)C13—C8—C7121.2 (2)
O1—C1—C5118.55 (16)C9—C8—C7121.1 (2)
C1—C2—C3107.23 (19)C10—C9—C8122.0 (2)
C1—C2—H2126.4C10—C9—H9119.0
C3—C2—H2126.4C8—C9—H9119.0
C4—C3—C2106.14 (18)C11—C10—C9119.8 (3)
C4—C3—H3126.9C11—C10—H10120.1
C2—C3—H3126.9C9—C10—H10120.1
C3—C4—O1111.05 (19)C10—C11—C12120.3 (3)
C3—C4—H4124.5C10—C11—H11119.9
O1—C4—H4124.5C12—C11—H11119.9
N1—C5—C1122.66 (18)C11—C12—C13119.7 (3)
N1—C5—H5118.7C11—C12—H12120.1
C1—C5—H5118.7C13—C12—H12120.1
N2—C6—S1121.22 (14)C8—C13—C12120.5 (2)
N2—C6—S2114.01 (13)C8—C13—H13119.7
S1—C6—S2124.76 (11)C12—C13—H13119.7
D—H···AD—HH···AD···AD—H···A
N2—H2N···S1i0.862.563.3761 (19)158
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N2—H2N⋯S1i0.862.563.3761 (19)158

Symmetry code: (i) .

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