Literature DB >> 22219951

Methyl (E)-3-(2-bromo-4,5-dimeth-oxy-benzyl-idene)dithio-carbazate.

Zheng Fan, Yan-Lan Huang, Fang Tong, Yi-Wei Huang, Shang Shan.   

Abstract

The title compound, C(11)H(13)BrN(2)O(2)S(2), was obtained from the condensation reaction of methyl dithio-carbazate and 2-bromo-4,5-dimeth-oxy-benzaldehyde. In the mol-ecule, the benzene ring and dithio-carbazate fragment are located on opposite sides of the C=N bond, showing an E conformation. The dithio-carbazate fragment is approximately planar (r.m.s deviation = 0.0281 Å) and the mean plane is oriented at a dihedral angle of 11.38 (15)° with respect to the benzene ring. In the crystal, pairs of N-H⋯S hydrogen bonds link the mol-ecules into centrosymmetric dimers.

Entities:  

Year:  2011        PMID: 22219951      PMCID: PMC3247333          DOI: 10.1107/S1600536811039304

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For applications of hydrazone and its derivatives in the biological field, see: Okabe et al. (1993 ▶); Hu et al. (2001 ▶). For related structures, see: Shan et al. (2008a ▶,b ▶,c ▶). For the synthesis, see: Hu et al. (2001 ▶).

Experimental

Crystal data

C11H13BrN2O2S2 M = 349.26 Triclinic, a = 5.2460 (12) Å b = 11.781 (5) Å c = 12.400 (5) Å α = 102.347 (3)° β = 100.930 (4)° γ = 101.874 (4)° V = 710.4 (4) Å3 Z = 2 Mo Kα radiation μ = 3.18 mm−1 T = 293 K 0.42 × 0.28 × 0.25 mm

Data collection

Rigaku R-AXIS RAPID IP diffractometer Absorption correction: multi-scan (ABSCOR; Higashi, 1995 ▶) T min = 0.73, T max = 0.82 5185 measured reflections 2553 independent reflections 2051 reflections with I > 2σ(I) R int = 0.026

Refinement

R[F 2 > 2σ(F 2)] = 0.035 wR(F 2) = 0.079 S = 1.02 2553 reflections 166 parameters H-atom parameters constrained Δρmax = 0.32 e Å−3 Δρmin = −0.35 e Å−3 Data collection: PROCESS-AUTO (Rigaku, 1998 ▶); cell refinement: PROCESS-AUTO; data reduction: CrystalStructure (Rigaku/MSC, 2002 ▶); program(s) used to solve structure: SIR92 (Altomare et al., 1993 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶). Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811039304/xu5332sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811039304/xu5332Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811039304/xu5332Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C11H13BrN2O2S2Z = 2
Mr = 349.26F(000) = 352
Triclinic, P1Dx = 1.633 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 5.2460 (12) ÅCell parameters from 2553 reflections
b = 11.781 (5) Åθ = 2.8–25.2°
c = 12.400 (5) ŵ = 3.18 mm1
α = 102.347 (3)°T = 293 K
β = 100.930 (4)°Prism, colorless
γ = 101.874 (4)°0.42 × 0.28 × 0.25 mm
V = 710.4 (4) Å3
Rigaku R-AXIS RAPID IP diffractometer2553 independent reflections
Radiation source: fine-focus sealed tube2051 reflections with I > 2σ(I)
graphiteRint = 0.026
Detector resolution: 10.0 pixels mm-1θmax = 25.2°, θmin = 2.8°
ω scansh = −5→6
Absorption correction: multi-scan (ABSCOR; Higashi, 1995)k = −14→11
Tmin = 0.73, Tmax = 0.82l = −14→14
5185 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.035Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.079H-atom parameters constrained
S = 1.02w = 1/[σ2(Fo2) + (0.037P)2] where P = (Fo2 + 2Fc2)/3
2553 reflections(Δ/σ)max = 0.001
166 parametersΔρmax = 0.32 e Å3
0 restraintsΔρmin = −0.35 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Br0.29930 (7)0.52287 (3)0.29304 (3)0.06212 (15)
S11.14891 (18)0.35920 (7)−0.09979 (7)0.0586 (2)
S20.95417 (16)0.13601 (7)−0.02534 (7)0.0499 (2)
N10.7198 (5)0.2821 (2)0.11142 (18)0.0411 (5)
N20.8444 (5)0.3398 (2)0.04224 (18)0.0438 (6)
H2N0.83600.41210.04280.053*
O10.3795 (4)0.0498 (2)0.38554 (17)0.0620 (6)
O20.1403 (4)0.1803 (2)0.49916 (17)0.0676 (6)
C10.3386 (5)0.3734 (3)0.3172 (2)0.0438 (7)
C20.2229 (5)0.3338 (3)0.3994 (2)0.0487 (7)
H20.13320.38100.44020.058*
C30.2405 (6)0.2269 (3)0.4200 (2)0.0480 (7)
C40.3727 (5)0.1538 (3)0.3573 (2)0.0459 (7)
C50.4848 (5)0.1938 (3)0.2762 (2)0.0424 (7)
H50.57210.14570.23480.051*
C60.4722 (5)0.3035 (2)0.2539 (2)0.0399 (6)
C70.6023 (5)0.3466 (3)0.1714 (2)0.0418 (6)
H70.60010.42270.16210.050*
C80.9769 (5)0.2856 (2)−0.0251 (2)0.0392 (6)
C91.1501 (7)0.0933 (3)−0.1230 (3)0.0603 (9)
H9A1.08990.1146−0.19230.090*
H9B1.12960.0081−0.13930.090*
H9C1.33580.1345−0.08990.090*
C100.5363 (7)−0.0214 (3)0.3356 (3)0.0635 (9)
H10A0.4618−0.04970.25480.095*
H10B0.5356−0.08880.36750.095*
H10C0.71740.02630.35060.095*
C110.0060 (7)0.2495 (4)0.5675 (3)0.0780 (12)
H11A0.12960.32450.61140.117*
H11B−0.05970.20570.61790.117*
H11C−0.14190.26480.51920.117*
U11U22U33U12U13U23
Br0.0681 (3)0.0539 (2)0.0700 (2)0.02466 (17)0.02423 (18)0.01301 (17)
S10.0871 (6)0.0518 (5)0.0646 (5)0.0304 (4)0.0508 (5)0.0325 (4)
S20.0635 (5)0.0409 (4)0.0588 (5)0.0197 (4)0.0304 (4)0.0217 (4)
N10.0497 (14)0.0445 (14)0.0364 (12)0.0116 (11)0.0202 (11)0.0177 (11)
N20.0615 (16)0.0401 (13)0.0443 (13)0.0190 (12)0.0286 (12)0.0215 (11)
O10.0794 (16)0.0694 (15)0.0599 (13)0.0274 (12)0.0413 (12)0.0352 (12)
O20.0721 (15)0.0933 (17)0.0550 (13)0.0250 (13)0.0420 (12)0.0298 (12)
C10.0391 (16)0.0493 (17)0.0406 (15)0.0114 (13)0.0083 (13)0.0083 (13)
C20.0431 (17)0.070 (2)0.0359 (15)0.0200 (15)0.0177 (13)0.0067 (15)
C30.0424 (17)0.070 (2)0.0361 (15)0.0117 (15)0.0180 (13)0.0177 (15)
C40.0435 (17)0.0566 (19)0.0369 (15)0.0064 (14)0.0137 (13)0.0139 (14)
C50.0459 (17)0.0515 (18)0.0346 (14)0.0148 (14)0.0190 (13)0.0112 (13)
C60.0382 (15)0.0470 (17)0.0354 (14)0.0094 (13)0.0133 (12)0.0106 (13)
C70.0481 (17)0.0421 (16)0.0391 (15)0.0117 (13)0.0159 (13)0.0142 (13)
C80.0474 (16)0.0425 (16)0.0346 (14)0.0158 (13)0.0144 (13)0.0166 (12)
C90.073 (2)0.0517 (19)0.073 (2)0.0287 (17)0.0390 (18)0.0213 (17)
C100.083 (2)0.062 (2)0.064 (2)0.0289 (19)0.0369 (19)0.0264 (17)
C110.067 (2)0.124 (3)0.0492 (19)0.024 (2)0.0377 (18)0.016 (2)
Br—C11.893 (3)C3—C41.411 (4)
S1—C81.662 (3)C4—C51.376 (4)
S2—C81.741 (3)C5—C61.390 (4)
S2—C91.789 (3)C5—H50.9300
N1—C71.280 (3)C6—C71.454 (4)
N1—N21.381 (3)C7—H70.9300
N2—C81.328 (3)C9—H9A0.9600
N2—H2N0.8600C9—H9B0.9600
O1—C41.349 (3)C9—H9C0.9600
O1—C101.421 (4)C10—H10A0.9600
O2—C31.360 (3)C10—H10B0.9600
O2—C111.431 (4)C10—H10C0.9600
C1—C21.395 (4)C11—H11A0.9600
C1—C61.398 (4)C11—H11B0.9600
C2—C31.355 (4)C11—H11C0.9600
C2—H20.9300
C8—S2—C9101.93 (13)N1—C7—C6121.3 (3)
C7—N1—N2113.4 (2)N1—C7—H7119.3
C8—N2—N1121.0 (2)C6—C7—H7119.3
C8—N2—H2N119.5N2—C8—S1120.9 (2)
N1—N2—H2N119.5N2—C8—S2114.23 (19)
C4—O1—C10118.1 (2)S1—C8—S2124.83 (16)
C3—O2—C11117.8 (3)S2—C9—H9A109.5
C2—C1—C6120.9 (3)S2—C9—H9B109.5
C2—C1—Br117.3 (2)H9A—C9—H9B109.5
C6—C1—Br121.8 (2)S2—C9—H9C109.5
C3—C2—C1120.3 (3)H9A—C9—H9C109.5
C3—C2—H2119.8H9B—C9—H9C109.5
C1—C2—H2119.8O1—C10—H10A109.5
C2—C3—O2125.5 (3)O1—C10—H10B109.5
C2—C3—C4120.3 (2)H10A—C10—H10B109.5
O2—C3—C4114.2 (3)O1—C10—H10C109.5
O1—C4—C5126.1 (3)H10A—C10—H10C109.5
O1—C4—C3115.1 (2)H10B—C10—H10C109.5
C5—C4—C3118.7 (3)O2—C11—H11A109.5
C4—C5—C6122.3 (3)O2—C11—H11B109.5
C4—C5—H5118.9H11A—C11—H11B109.5
C6—C5—H5118.9O2—C11—H11C109.5
C5—C6—C1117.5 (2)H11A—C11—H11C109.5
C5—C6—C7121.5 (2)H11B—C11—H11C109.5
C1—C6—C7121.0 (3)
D—H···AD—HH···AD···AD—H···A
N2—H2N···S1i0.862.623.456 (4)166
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N2—H2N⋯S1i0.862.623.456 (4)166

Symmetry code: (i) .

  4 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
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2.  Benzyl 3-[(E)-benzyl-idene]dithio-carbazate.

Authors:  Shang Shan; Yu-Liang Tian; Shan-Heng Wang; Wen-Long Wang; Ying-Li Xu
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-05-07

3.  Benzyl 3-[(E)-furfuryl-idene]dithio-carbazate.

Authors:  Shang Shan; Yu-Liang Tian; Shan-Heng Wang; Wen-Long Wang; Ying-Li Xu
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-05-10

4.  Methyl 3-[(E)-1-(4-amino-phen-yl)ethyl-idene]dithio-carbazate.

Authors:  Shang Shan; Shan-Heng Wang; Yu-Liang Tian; Wen-Long Wang; Ying-Li Xu
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-05-07
  4 in total

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