Literature DB >> 22969635

Benzyl 3-[(E)-(furan-2-yl)methyl-idene]-2-methyldithio-carbazate.

Benu K Dey, Sebastian Suarez, Biplab Ganguly, Fabio Doctorovich, Tapashi G Roy.   

Abstract

In the title compound, C(14)H(14)N(2)OS(2), the furan ring exhibits rotational disorder over two orientations, with an occupancy ratio of 0.508 (7):0.492 (7). The furan and phenyl rings form dihedral angles of 8.2 (6) (major occupancy component), 14.8 (6) (minor occupancy component) and 73.65 (9)°, respectively, with the central residue (C(4)N(2)S(2)), indicating a twisted conformation for the mol-ecule. The methyl group and the thione S atom are syn and the conformation about the imine bond is E. In the crystal, C-H⋯π inter-actions involving the phenyl ring are observed.

Entities:  

Year:  2012        PMID: 22969635      PMCID: PMC3435764          DOI: 10.1107/S1600536812035520

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to the biological activity of S-containing ligands, see: Hazari et al. (2012 ▶). For related structures, see: Shan et al. (2008 ▶); Ganguly et al. (2011 ▶). For a similar compound with a thio­phene instead of a furan ring, see: Hazari et al. (2012 ▶).

Experimental

Crystal data

C14H14N2OS2 M = 290.39 Monoclinic, a = 6.0415 (3) Å b = 20.4840 (11) Å c = 11.8959 (7) Å β = 101.601 (5)° V = 1442.09 (14) Å3 Z = 4 Mo Kα radiation μ = 0.36 mm−1 T = 298 K 0.5 × 0.5 × 0.3 mm

Data collection

Oxford Diffraction Gemini CCD S Ultra diffractometer Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2009 ▶) T min = 0.850, T max = 0.897 21725 measured reflections 3361 independent reflections 2393 reflections with I > 2σ(I) R int = 0.033

Refinement

R[F 2 > 2σ(F 2)] = 0.040 wR(F 2) = 0.090 S = 1.06 3361 reflections 219 parameters 12 restraints H-atom parameters constrained Δρmax = 0.16 e Å−3 Δρmin = −0.17 e Å−3 Data collection: CrysAlis PRO (Oxford Diffraction, 2009 ▶); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶). Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812035520/bh2449sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812035520/bh2449Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812035520/bh2449Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C14H14N2OS2F(000) = 608
Mr = 290.39Dx = 1.338 Mg m3
Monoclinic, P21/nMelting point: 432 K
Hall symbol: -P 2ynMo Kα radiation, λ = 0.71073 Å
a = 6.0415 (3) ÅCell parameters from 4212 reflections
b = 20.4840 (11) Åθ = 4.0–28.9°
c = 11.8959 (7) ŵ = 0.36 mm1
β = 101.601 (5)°T = 298 K
V = 1442.09 (14) Å3Prism, green
Z = 40.5 × 0.5 × 0.3 mm
Oxford Diffraction Gemini CCD S Ultra diffractometer3361 independent reflections
Graphite monochromator2393 reflections with I > 2σ(I)
Detector resolution: 16.1158 pixels mm-1Rint = 0.033
ω scansθmax = 27.9°, θmin = 4.0°
Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2009)h = −7→7
Tmin = 0.850, Tmax = 0.897k = 0→26
21725 measured reflectionsl = 0→15
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.040Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.090H-atom parameters constrained
S = 1.06w = 1/[σ2(Fo2) + (0.0275P)2 + 0.3918P] where P = (Fo2 + 2Fc2)/3
3361 reflections(Δ/σ)max < 0.001
219 parametersΔρmax = 0.16 e Å3
12 restraintsΔρmin = −0.17 e Å3
0 constraints
xyzUiso*/UeqOcc. (<1)
S10.84126 (9)0.20754 (3)0.57831 (5)0.06926 (18)
S20.99621 (8)0.08488 (2)0.71050 (4)0.05239 (14)
N11.2300 (3)0.19263 (7)0.72613 (14)0.0561 (4)
N21.3649 (2)0.15222 (8)0.80423 (13)0.0554 (4)
C10.5997 (3)−0.13887 (10)0.66897 (17)0.0637 (5)
H1A0.5707−0.18280.67910.076*
C20.7562 (4)−0.12057 (10)0.60675 (18)0.0656 (5)
H2A0.8344−0.15220.57440.079*
C30.7987 (3)−0.05537 (10)0.59175 (17)0.0605 (5)
H3A0.9062−0.04360.54940.073*
C40.6844 (3)−0.00718 (9)0.63849 (14)0.0471 (4)
C50.5281 (3)−0.02642 (10)0.70175 (16)0.0580 (5)
H5A0.45040.0050.7350.07*
C60.4856 (3)−0.09170 (11)0.71639 (19)0.0676 (6)
H6A0.3786−0.10390.75880.081*
C70.7263 (3)0.06390 (9)0.61993 (16)0.0554 (5)
H7A0.60670.09020.64030.066*
H7B0.73020.07190.540.066*
C81.0304 (3)0.16650 (9)0.67204 (15)0.0496 (4)
C91.3012 (4)0.25833 (10)0.7034 (2)0.0813 (7)
H9A1.18250.27970.65030.122*
H9B1.43430.25610.6710.122*
H9C1.33390.28260.77380.122*
C101.5598 (3)0.17332 (11)0.85386 (18)0.0663 (6)
H10A1.61660.21340.83640.08*0.508 (7)
H10B1.59480.21560.83470.08*0.492 (7)
O11.6236 (10)0.0685 (3)0.9740 (6)0.0728 (16)0.508 (7)
C111.691 (2)0.1271 (8)0.9441 (14)0.055 (3)0.508 (7)
C121.9117 (12)0.1360 (5)1.0053 (7)0.081 (2)0.508 (7)
H12A2.00610.17161.0030.097*0.508 (7)
C131.960 (4)0.0774 (10)1.0732 (16)0.083 (4)0.508 (7)
H13A2.0950.06841.1240.1*0.508 (7)
C141.7950 (12)0.0413 (4)1.0535 (6)0.088 (2)0.508 (7)
H14A1.78690.00081.08780.106*0.508 (7)
O1'1.9236 (7)0.1675 (2)0.9587 (4)0.0668 (14)0.492 (7)
C11'1.720 (2)0.1418 (9)0.9281 (16)0.054 (3)0.492 (7)
C12'1.6978 (18)0.0874 (6)0.9882 (9)0.075 (2)0.492 (7)
H12B1.57130.06110.98550.09*0.492 (7)
C13'1.922 (5)0.0804 (15)1.058 (2)0.112 (9)0.492 (7)
H13B1.9690.04671.10970.134*0.492 (7)
C14'2.0407 (11)0.1267 (4)1.0379 (6)0.078 (2)0.492 (7)
H14B2.19150.13241.0730.093*0.492 (7)
U11U22U33U12U13U23
S10.0677 (3)0.0587 (3)0.0773 (4)0.0155 (2)0.0048 (3)0.0102 (3)
S20.0496 (3)0.0497 (3)0.0529 (3)0.0008 (2)−0.00161 (19)0.0016 (2)
N10.0523 (9)0.0497 (9)0.0666 (10)−0.0012 (7)0.0124 (8)−0.0024 (8)
N20.0479 (9)0.0599 (9)0.0573 (9)0.0000 (7)0.0082 (7)−0.0103 (8)
C10.0673 (13)0.0523 (12)0.0684 (13)−0.0010 (10)0.0061 (10)0.0024 (10)
C20.0726 (13)0.0577 (12)0.0690 (13)0.0165 (10)0.0201 (11)−0.0040 (10)
C30.0589 (12)0.0627 (13)0.0638 (12)0.0075 (9)0.0218 (10)0.0016 (10)
C40.0400 (9)0.0520 (10)0.0451 (9)0.0031 (7)−0.0014 (7)−0.0034 (8)
C50.0487 (10)0.0617 (12)0.0637 (12)0.0049 (9)0.0116 (9)−0.0107 (10)
C60.0597 (12)0.0703 (14)0.0767 (14)−0.0065 (10)0.0228 (11)−0.0010 (11)
C70.0479 (10)0.0534 (11)0.0592 (11)0.0034 (8)−0.0027 (8)0.0001 (9)
C80.0513 (10)0.0489 (10)0.0509 (10)0.0061 (8)0.0156 (8)−0.0048 (8)
C90.0736 (15)0.0534 (13)0.120 (2)−0.0069 (11)0.0259 (14)0.0048 (13)
C100.0540 (12)0.0694 (13)0.0745 (14)−0.0052 (10)0.0108 (10)−0.0231 (11)
O10.064 (3)0.081 (4)0.066 (3)0.006 (2)−0.004 (2)−0.003 (2)
C110.037 (3)0.078 (10)0.051 (6)−0.010 (5)0.008 (4)−0.014 (4)
C120.053 (3)0.100 (7)0.083 (5)−0.011 (4)−0.002 (4)−0.034 (4)
C130.070 (5)0.102 (10)0.068 (6)0.018 (5)−0.006 (4)−0.022 (5)
C140.080 (5)0.114 (6)0.064 (3)0.031 (4)−0.003 (3)−0.002 (4)
O1'0.052 (2)0.074 (3)0.068 (3)−0.0043 (19)−0.0011 (17)−0.0178 (19)
C11'0.053 (5)0.056 (5)0.056 (5)−0.015 (4)0.019 (4)−0.015 (3)
C12'0.074 (6)0.090 (7)0.058 (4)−0.007 (5)0.007 (5)−0.003 (4)
C13'0.13 (2)0.129 (14)0.070 (7)0.048 (13)0.003 (9)0.010 (9)
C14'0.060 (3)0.094 (5)0.070 (4)0.013 (3)−0.007 (3)−0.018 (3)
S1—C81.6562 (18)C9—H9B0.96
S2—C81.7566 (19)C9—H9C0.96
S2—C71.8161 (18)C10—C111.529 (10)
N1—C81.357 (2)C10—C11'1.338 (11)
N1—N21.381 (2)C10—H10A0.93
N1—C91.455 (2)C10—H10B0.9299
N2—C101.281 (2)O1—C111.338 (14)
C1—C21.365 (3)O1—C141.373 (9)
C1—C61.372 (3)C11—C121.396 (13)
C1—H1A0.93C12—C131.444 (18)
C2—C31.378 (3)C12—H12A0.93
C2—H2A0.93C13—C141.23 (3)
C3—C41.384 (2)C13—H13A0.93
C3—H3A0.93C14—H14A0.93
C4—C51.378 (2)O1'—C11'1.320 (15)
C4—C71.502 (2)O1'—C14'1.349 (8)
C5—C61.379 (3)C11'—C12'1.347 (14)
C5—H5A0.93C12'—C13'1.45 (2)
C6—H6A0.93C12'—H12B0.93
C7—H7A0.97C13'—C14'1.24 (3)
C7—H7B0.97C13'—H13B0.93
C9—H9A0.96C14'—H14B0.93
C8—S2—C7102.08 (8)H9A—C9—H9C109.5
C8—N1—N2115.50 (15)H9B—C9—H9C109.5
C8—N1—C9123.00 (17)N2—C10—C11'128.2 (7)
N2—N1—C9121.50 (16)N2—C10—C11114.4 (6)
C10—N2—N1118.11 (17)N2—C10—H10A122.8
C2—C1—C6119.30 (19)C11'—C10—H10A108.8
C2—C1—H1A120.3C11—C10—H10A122.8
C6—C1—H1A120.3N2—C10—H10B115.7
C1—C2—C3120.25 (18)C11'—C10—H10B116.1
C1—C2—H2A119.9C11—C10—H10B129.6
C3—C2—H2A119.9C11—O1—C14108.6 (6)
C2—C3—C4121.21 (18)O1—C11—C12106.8 (7)
C2—C3—H3A119.4O1—C11—C10126.8 (9)
C4—C3—H3A119.4C12—C11—C10126.3 (11)
C5—C4—C3117.87 (18)C11—C12—C13104.3 (13)
C5—C4—C7120.78 (17)C11—C12—H12A127.9
C3—C4—C7121.35 (17)C13—C12—H12A127.9
C4—C5—C6120.78 (18)C14—C13—C12109.3 (13)
C4—C5—H5A119.6C14—C13—H13A125.4
C6—C5—H5A119.6C12—C13—H13A125.4
C1—C6—C5120.59 (19)C13—C14—O1111.0 (9)
C1—C6—H6A119.7C13—C14—H14A124.5
C5—C6—H6A119.7O1—C14—H14A124.5
C4—C7—S2107.45 (12)C11'—O1'—C14'105.9 (6)
C4—C7—H7A110.2O1'—C11'—C10120.0 (10)
S2—C7—H7A110.2O1'—C11'—C12'111.8 (9)
C4—C7—H7B110.2C10—C11'—C12'127.8 (13)
S2—C7—H7B110.2C11'—C12'—C13'101.9 (15)
H7A—C7—H7B108.5C11'—C12'—H12B129.1
N1—C8—S1123.08 (14)C13'—C12'—H12B129.1
N1—C8—S2113.05 (13)C14'—C13'—C12'108.9 (12)
S1—C8—S2123.87 (11)C14'—C13'—H13B125.5
N1—C9—H9A109.5C12'—C13'—H13B125.5
N1—C9—H9B109.5C13'—C14'—O1'111.5 (9)
H9A—C9—H9B109.5C13'—C14'—H14B124.3
N1—C9—H9C109.5O1'—C14'—H14B124.3
D—H···AD—HH···AD···AD—H···A
C7—H7B···Cgi0.972.883.560 (2)128
C13—H13A···Cgii0.932.803.62 (2)149
Table 1

Hydrogen-bond geometry (Å, °)

Table 1 ▶. Cg is the centroid of the phenyl ring

D—H⋯A D—HH⋯A DA D—H⋯A
C7—H7BCg i 0.972.883.560 (2)128
C13—H13ACg ii 0.932.803.62 (2)149

Symmetry codes: (i) ; (ii) .

  4 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Benzyl 3-[(E)-furfuryl-idene]dithio-carbazate.

Authors:  Shang Shan; Yu-Liang Tian; Shan-Heng Wang; Wen-Long Wang; Ying-Li Xu
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-05-10

3.  5-Hy-droxy-3-methyl-5-phenyl-4,5-di-hydro-1H-pyrazole-1-carbothio-amide.

Authors:  Biplab Ganguly; Ana Foi; Fabio Doctorovich; Benu K Dey; Tapashi G Roy
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-09-30

4.  Benzyl 2-methyl-3-[(E)-(thio-phen-2-yl)methyl-idene]dithio-carbazate.

Authors:  Saroj K S Hazari; B K Dey; Tapashi G Roy; B Ganguly; Seik Weng Ng; Edward R T Tiekink
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-03-28
  4 in total

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