Literature DB >> 21202539

Benzyl 3-[(E)-benzyl-idene]dithio-carbazate.

Shang Shan1, Yu-Liang Tian, Shan-Heng Wang, Wen-Long Wang, Ying-Li Xu.   

Abstract

Crystals of the title compound, C(15)H(14)N(2)S(2), were obtained from a condensation reaction of benzyl dithio-carbazate and benzaldehyde. The mol-ecule assumes an E configuration about the N=C double bond. The phenyl ring of the thio-ester group is nearly perpendicular to the dithio-carbazate plane, with a dihedral angle of 84.60 (5)°. In the crystal structure, inter-molecular N-H⋯S hydrogen bonding links adjacent mol-ecules to form a centrosymmetric supra-molecular dimer.

Entities:  

Year:  2008        PMID: 21202539      PMCID: PMC2961347          DOI: 10.1107/S1600536808012944

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background, see: Okabe et al. (1993 ▶); Hu et al. (2001 ▶). For related structures, see: Shan et al. (2006 ▶, 2008 ▶); Zhang et al. (2005 ▶). For synthesis, see: Hu et al. (2001 ▶).

Experimental

Crystal data

C15H14N2S2 M = 286.40 Monoclinic, a = 5.0053 (18) Å b = 23.075 (8) Å c = 12.646 (5) Å β = 97.652 (12)° V = 1447.6 (9) Å3 Z = 4 Mo Kα radiation μ = 0.35 mm−1 T = 295 (2) K 0.30 × 0.28 × 0.22 mm

Data collection

Rigaku R-AXIS RAPID diffractometer Absorption correction: none 15395 measured reflections 2653 independent reflections 2115 reflections with I > 2σ(I) R int = 0.034

Refinement

R[F 2 > 2σ(F 2)] = 0.032 wR(F 2) = 0.087 S = 1.05 2653 reflections 172 parameters H-atom parameters constrained Δρmax = 0.15 e Å−3 Δρmin = −0.18 e Å−3 Data collection: PROCESS-AUTO (Rigaku, 1998 ▶); cell refinement: PROCESS-AUTO; data reduction: CrystalStructure (Rigaku/MSC, 2002 ▶); program(s) used to solve structure: SIR92 (Altomare et al., 1993 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536808012944/xu2422sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808012944/xu2422Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C15H14N2S2F000 = 600
Mr = 286.40Dx = 1.314 Mg m3
Monoclinic, P21/nMo Kα radiation λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 6568 reflections
a = 5.0053 (18) Åθ = 1.9–25.0º
b = 23.075 (8) ŵ = 0.36 mm1
c = 12.646 (5) ÅT = 295 (2) K
β = 97.652 (12)ºPrism, yellow
V = 1447.6 (9) Å30.30 × 0.28 × 0.22 mm
Z = 4
Rigaku R-AXIS RAPID diffractometer2653 independent reflections
Radiation source: fine-focus sealed tube2115 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.034
Detector resolution: 10.00 pixels mm-1θmax = 25.5º
T = 295(2) Kθmin = 1.8º
ω scansh = −5→6
Absorption correction: nonek = −27→27
15395 measured reflectionsl = −15→13
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.032H-atom parameters constrained
wR(F2) = 0.087  w = 1/[σ2(Fo2) + (0.0424P)2 + 0.226P] where P = (Fo2 + 2Fc2)/3
S = 1.05(Δ/σ)max = 0.001
2653 reflectionsΔρmax = 0.15 e Å3
172 parametersΔρmin = −0.18 e Å3
Primary atom site location: structure-invariant direct methodsExtinction correction: none
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S1−0.16273 (11)0.58470 (2)0.94815 (4)0.06114 (17)
S20.02011 (10)0.602875 (18)0.73176 (4)0.05159 (15)
N10.3232 (3)0.50304 (6)0.78197 (11)0.0493 (4)
N20.1740 (3)0.51871 (6)0.86146 (11)0.0516 (4)
H2N0.18290.49790.91830.062*
C10.6444 (3)0.43585 (7)0.72802 (14)0.0486 (4)
C20.6602 (4)0.46157 (8)0.62992 (16)0.0599 (5)
H20.56210.49510.61090.072*
C30.8199 (5)0.43796 (10)0.56054 (17)0.0721 (6)
H30.82850.45540.49480.087*
C40.9663 (4)0.38875 (10)0.5882 (2)0.0764 (6)
H41.07360.37280.54110.092*
C50.9551 (4)0.36326 (10)0.68450 (19)0.0766 (6)
H51.05550.33000.70290.092*
C60.7955 (4)0.38637 (8)0.75514 (17)0.0632 (5)
H60.78940.36870.82090.076*
C70.4749 (4)0.45888 (7)0.80289 (15)0.0529 (4)
H70.47690.44070.86870.064*
C80.0160 (3)0.56550 (7)0.85190 (13)0.0458 (4)
C9−0.2180 (4)0.66100 (7)0.74434 (14)0.0531 (4)
H9A−0.39890.64550.74190.064*
H9B−0.17160.68100.81170.064*
C10−0.2041 (4)0.70207 (7)0.65275 (14)0.0494 (4)
C11−0.3930 (4)0.69963 (9)0.56287 (17)0.0667 (5)
H11−0.53130.67250.55940.080*
C12−0.3804 (5)0.73660 (11)0.47831 (19)0.0829 (7)
H12−0.50850.73400.41810.099*
C13−0.1794 (5)0.77726 (10)0.4826 (2)0.0791 (7)
H13−0.17270.80280.42610.095*
C140.0112 (5)0.77991 (9)0.5708 (2)0.0763 (6)
H140.14980.80690.57380.092*
C15−0.0015 (4)0.74263 (8)0.65529 (17)0.0646 (5)
H150.12880.74490.71490.077*
U11U22U33U12U13U23
S10.0859 (4)0.0527 (3)0.0517 (3)0.0075 (2)0.0347 (3)0.0005 (2)
S20.0620 (3)0.0500 (3)0.0471 (3)0.00360 (19)0.0232 (2)0.00234 (19)
N10.0549 (9)0.0477 (8)0.0489 (8)−0.0014 (7)0.0201 (7)−0.0032 (6)
N20.0653 (9)0.0477 (8)0.0461 (8)0.0036 (7)0.0230 (7)0.0024 (6)
C10.0480 (10)0.0471 (9)0.0524 (11)−0.0032 (7)0.0134 (8)−0.0040 (8)
C20.0651 (12)0.0590 (10)0.0583 (12)0.0062 (9)0.0185 (10)0.0013 (9)
C30.0781 (15)0.0856 (15)0.0573 (13)0.0032 (12)0.0262 (11)−0.0024 (11)
C40.0655 (14)0.0940 (16)0.0730 (16)0.0107 (12)0.0213 (11)−0.0231 (13)
C50.0759 (15)0.0712 (13)0.0842 (17)0.0250 (11)0.0162 (12)−0.0062 (12)
C60.0666 (13)0.0602 (11)0.0645 (13)0.0083 (9)0.0144 (10)0.0046 (9)
C70.0610 (11)0.0505 (9)0.0502 (11)0.0008 (8)0.0179 (9)0.0027 (8)
C80.0546 (10)0.0411 (8)0.0442 (10)−0.0077 (7)0.0156 (8)−0.0042 (7)
C90.0545 (11)0.0533 (10)0.0550 (11)0.0019 (8)0.0197 (9)−0.0007 (8)
C100.0528 (10)0.0460 (9)0.0519 (11)0.0087 (8)0.0166 (8)−0.0021 (8)
C110.0584 (12)0.0711 (13)0.0704 (14)0.0066 (10)0.0081 (10)0.0072 (11)
C120.0804 (16)0.0956 (17)0.0710 (15)0.0220 (14)0.0040 (12)0.0202 (13)
C130.0980 (18)0.0725 (14)0.0732 (16)0.0309 (13)0.0347 (14)0.0260 (12)
C140.0918 (17)0.0560 (11)0.0876 (17)−0.0046 (11)0.0362 (14)0.0068 (11)
C150.0734 (13)0.0599 (11)0.0619 (13)−0.0063 (10)0.0146 (10)−0.0004 (9)
S1—C81.6636 (17)C5—H50.9300
S2—C81.7495 (17)C6—H60.9300
S2—C91.8153 (18)C7—H70.9300
N1—C71.277 (2)C9—C101.505 (2)
N1—N21.3777 (19)C9—H9A0.9700
N2—C81.334 (2)C9—H9B0.9700
N2—H2N0.8600C10—C151.377 (3)
C1—C21.387 (3)C10—C111.379 (3)
C1—C61.387 (3)C11—C121.376 (3)
C1—C71.454 (2)C11—H110.9300
C2—C31.375 (3)C12—C131.371 (3)
C2—H20.9300C12—H120.9300
C3—C41.372 (3)C13—C141.370 (3)
C3—H30.9300C13—H130.9300
C4—C51.360 (3)C14—C151.380 (3)
C4—H40.9300C14—H140.9300
C5—C61.382 (3)C15—H150.9300
C8—S2—C9101.79 (8)N2—C8—S2113.71 (12)
C7—N1—N2115.03 (14)S1—C8—S2125.02 (10)
C8—N2—N1121.23 (14)C10—C9—S2107.43 (11)
C8—N2—H2N119.4C10—C9—H9A110.2
N1—N2—H2N119.4S2—C9—H9A110.2
C2—C1—C6118.64 (17)C10—C9—H9B110.2
C2—C1—C7122.28 (16)S2—C9—H9B110.2
C6—C1—C7119.08 (17)H9A—C9—H9B108.5
C3—C2—C1120.55 (19)C15—C10—C11117.96 (18)
C3—C2—H2119.7C15—C10—C9121.28 (17)
C1—C2—H2119.7C11—C10—C9120.75 (17)
C4—C3—C2120.1 (2)C12—C11—C10121.2 (2)
C4—C3—H3120.0C12—C11—H11119.4
C2—C3—H3120.0C10—C11—H11119.4
C5—C4—C3120.2 (2)C13—C12—C11120.2 (2)
C5—C4—H4119.9C13—C12—H12119.9
C3—C4—H4119.9C11—C12—H12119.9
C4—C5—C6120.5 (2)C14—C13—C12119.4 (2)
C4—C5—H5119.7C14—C13—H13120.3
C6—C5—H5119.7C12—C13—H13120.3
C5—C6—C1120.0 (2)C13—C14—C15120.3 (2)
C5—C6—H6120.0C13—C14—H14119.9
C1—C6—H6120.0C15—C14—H14119.9
N1—C7—C1122.63 (16)C10—C15—C14121.0 (2)
N1—C7—H7118.7C10—C15—H15119.5
C1—C7—H7118.7C14—C15—H15119.5
N2—C8—S1121.27 (13)
D—H···AD—HH···AD···AD—H···A
N2—H2N···S1i0.862.563.396 (2)165
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N2—H2N⋯S1i0.862.563.396 (2)165

Symmetry code: (i) .

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