Literature DB >> 21202460

Diaqua-[5-(2-pyrid-yl)tetra-zolato-κN,N]manganese(II).

Xiao-Chun Wen1.   

Abstract

The title compound, [Mn(C(6)H(4)N(5))(2)(H(2)O)(2)], was synthesized by the hydro-thermal reaction of Mn(NO(3))(2) with picolino-nitrile in the presence of NaN(3). The Mn atom lies on an inversion centre. The distorted octa-hedral Mn environment contains two planar trans-related N,N'-chelating 5-(2-pyrid-yl)-tetra-zolate ligands in the equatorial plane and two axial water mol-ecules. O-H⋯N hydrogen bonds generate an infinite three-dimensional network.

Entities:  

Year:  2008        PMID: 21202460      PMCID: PMC2961478          DOI: 10.1107/S1600536808010106

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the chemisty of tetra­zole, see: Arp et al. (2000 ▶); Dunica et al. (1991 ▶); Wang et al. (2005 ▶); Wittenberger & Donner (1993 ▶).

Experimental

Crystal data

[Mn(C6H4N5)2(H2O)2] M = 383.26 Monoclinic, a = 6.185 (3) Å b = 12.110 (7) Å c = 10.615 (5) Å β = 106.597 (12)° V = 761.9 (7) Å3 Z = 2 Mo Kα radiation μ = 0.90 mm−1 T = 293 (2) K 0.5 × 0.5 × 0.4 mm

Data collection

Rigaku Mercury2 diffractometer Absorption correction: multi-scan (CrystalClear; Rigaku, 2005 ▶) T min = 0.638, T max = 0.695 7656 measured reflections 1803 independent reflections 1660 reflections with I > 2σ(I) R int = 0.021

Refinement

R[F 2 > 2σ(F 2)] = 0.028 wR(F 2) = 0.071 S = 1.10 1803 reflections 115 parameters H-atom parameters constrained Δρmax = 0.26 e Å−3 Δρmin = −0.30 e Å−3 Data collection: CrystalClear (Rigaku, 2005 ▶); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEPIII (Burnett & Johnson, 1996 ▶), ORTEP3 (Farrugia, 1997 ▶) and SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536808010106/dn2338sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808010106/dn2338Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Mn(C6H4N5)2(H2O)2]F000 = 390
Mr = 383.26Dx = 1.671 Mg m3
Monoclinic, P21/nMo Kα radiation λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 2090 reflections
a = 6.185 (3) Åθ = 3.8–27.5º
b = 12.110 (7) ŵ = 0.90 mm1
c = 10.615 (5) ÅT = 293 (2) K
β = 106.597 (12)ºBlock, yellow
V = 761.9 (7) Å30.5 × 0.5 × 0.4 mm
Z = 2
Rigaku Mercury2 (2x2 bin mode) diffractometer1803 independent reflections
Radiation source: fine-focus sealed tube1660 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.021
Detector resolution: 13.6612 pixels mm-1θmax = 27.9º
T = 293(2) Kθmin = 2.6º
ω scansh = −8→8
Absorption correction: multi-scan(CrystalClear; Rigaku, 2005)k = −15→15
Tmin = 0.638, Tmax = 0.695l = −13→13
7656 measured reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.028H-atom parameters constrained
wR(F2) = 0.071  w = 1/[σ2(Fo2) + (0.0346P)2 + 0.2477P] where P = (Fo2 + 2Fc2)/3
S = 1.11(Δ/σ)max = 0.001
1803 reflectionsΔρmax = 0.26 e Å3
115 parametersΔρmin = −0.30 e Å3
Primary atom site location: structure-invariant direct methodsExtinction correction: none
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.2334 (2)0.69220 (11)0.35475 (13)0.0241 (3)
C20.4533 (2)0.74376 (11)0.41494 (13)0.0244 (3)
C30.4930 (3)0.85522 (12)0.40133 (15)0.0344 (3)
H30.37990.90080.35110.041*
C40.7043 (3)0.89713 (13)0.46408 (17)0.0412 (4)
H40.73490.97170.45690.049*
C50.8696 (3)0.82755 (14)0.53750 (16)0.0393 (4)
H51.01210.85440.58140.047*
C60.8179 (2)0.71703 (13)0.54410 (15)0.0325 (3)
H60.92990.66980.59210.039*
Mn10.50000.50000.50000.02576 (11)
N10.61452 (19)0.67490 (9)0.48475 (11)0.0255 (2)
N20.19348 (18)0.58625 (9)0.37478 (12)0.0275 (2)
N3−0.0219 (2)0.56898 (11)0.30475 (13)0.0338 (3)
N4−0.1061 (2)0.66105 (11)0.24559 (13)0.0368 (3)
N50.0515 (2)0.74084 (10)0.27584 (12)0.0318 (3)
O1W0.58488 (19)0.45145 (9)0.32058 (11)0.0393 (3)
H1W0.55100.38580.29050.059*
H2W0.70960.47750.31510.059*
U11U22U33U12U13U23
C10.0229 (6)0.0215 (6)0.0268 (6)0.0016 (5)0.0055 (5)0.0021 (5)
C20.0237 (6)0.0221 (6)0.0267 (6)−0.0007 (5)0.0059 (5)0.0014 (5)
C30.0350 (7)0.0238 (7)0.0409 (8)−0.0016 (6)0.0050 (6)0.0051 (6)
C40.0445 (9)0.0267 (7)0.0491 (9)−0.0124 (6)0.0082 (7)0.0013 (6)
C50.0299 (7)0.0422 (9)0.0407 (8)−0.0135 (6)0.0019 (6)−0.0014 (7)
C60.0243 (6)0.0366 (8)0.0327 (7)−0.0011 (6)0.0020 (5)0.0024 (6)
Mn10.02613 (16)0.01760 (16)0.03133 (17)0.00182 (10)0.00463 (12)0.00246 (10)
N10.0235 (5)0.0237 (5)0.0277 (5)0.0000 (4)0.0047 (4)0.0021 (4)
N20.0222 (5)0.0227 (6)0.0342 (6)−0.0018 (4)0.0026 (5)0.0001 (4)
N30.0239 (6)0.0332 (7)0.0400 (7)−0.0042 (5)0.0023 (5)−0.0009 (5)
N40.0246 (6)0.0402 (7)0.0407 (7)−0.0016 (5)0.0012 (5)0.0044 (6)
N50.0240 (6)0.0316 (6)0.0363 (6)0.0023 (5)0.0029 (5)0.0075 (5)
O1W0.0422 (6)0.0340 (6)0.0472 (6)−0.0123 (5)0.0213 (5)−0.0121 (5)
C1—N51.3325 (17)C6—H60.9300
C1—N21.3350 (18)Mn1—O1Wi2.1954 (14)
C1—C21.4670 (19)Mn1—O1W2.1954 (14)
C2—N11.3478 (17)Mn1—N2i2.2388 (14)
C2—C31.387 (2)Mn1—N22.2388 (14)
C3—C41.383 (2)Mn1—N1i2.2538 (16)
C3—H30.9300Mn1—N12.2538 (16)
C4—C51.381 (2)N2—N31.3438 (17)
C4—H40.9300N3—N41.3122 (19)
C5—C61.382 (2)N4—N51.3449 (18)
C5—H50.9300O1W—H1W0.8597
C6—N11.3367 (18)O1W—H2W0.8507
N5—C1—N2111.33 (12)N2i—Mn1—N2180.0
N5—C1—C2126.65 (12)O1Wi—Mn1—N1i91.80 (5)
N2—C1—C2122.03 (11)O1W—Mn1—N1i88.20 (5)
N1—C2—C3122.30 (13)N2i—Mn1—N1i75.47 (5)
N1—C2—C1115.11 (12)N2—Mn1—N1i104.53 (5)
C3—C2—C1122.59 (12)O1Wi—Mn1—N188.20 (5)
C4—C3—C2118.56 (14)O1W—Mn1—N191.80 (5)
C4—C3—H3120.7N2i—Mn1—N1104.53 (5)
C2—C3—H3120.7N2—Mn1—N175.47 (5)
C5—C4—C3119.57 (14)N1i—Mn1—N1180.0
C5—C4—H4120.2C6—N1—C2118.14 (12)
C3—C4—H4120.2C6—N1—Mn1126.70 (10)
C4—C5—C6118.32 (14)C2—N1—Mn1115.00 (9)
C4—C5—H5120.8C1—N2—N3105.11 (11)
C6—C5—H5120.8C1—N2—Mn1112.29 (9)
N1—C6—C5123.09 (14)N3—N2—Mn1142.51 (9)
N1—C6—H6118.5N4—N3—N2109.13 (12)
C5—C6—H6118.5N3—N4—N5109.55 (12)
O1Wi—Mn1—O1W180.0C1—N5—N4104.88 (12)
O1Wi—Mn1—N2i88.95 (5)Mn1—O1W—H1W118.4
O1W—Mn1—N2i91.05 (5)Mn1—O1W—H2W114.0
O1Wi—Mn1—N291.05 (5)H1W—O1W—H2W116.5
O1W—Mn1—N288.95 (5)
D—H···AD—HH···AD···AD—H···A
O1W—H2W···N3ii0.852.032.864 (2)169
O1W—H1W···N5iii0.861.932.788 (2)175
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1W—H2W⋯N3i0.852.032.864 (2)169
O1W—H1W⋯N5ii0.861.932.788 (2)175

Symmetry codes: (i) ; (ii) .

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  3 in total
  9 in total

1.  2-(2H-Tetra-zol-5-yl)pyridinium nitrate.

Authors:  Li-Jing Cui; Miao-Jia Yu
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-05-20

2.  4-(2H-Tetra-zol-5-yl)pyridinium perchlorate.

Authors:  Jing Dai
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-05-20

3.  Diaqua-bis[5-(2-pyrid-yl)tetra-zolato-κN,N]iron(II).

Authors:  Min Hu; Song-Tao Ma; Liang-Qi Guo; Shao-Ming Fang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-03-11

4.  3-(1H-Tetra-zol-5-yl)pyridinium 3-(2H-tetra-zol-5-yl)pyridinium dinitrate.

Authors:  Li-Jing Cui
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-06-27

5.  5-[1-(Carb-oxy-meth-yl)pyridinium-4-yl]-1,2,3,4-tetra-zol-1-ide.

Authors:  Li-Ping Feng; Liang Zhao
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-11-27

6.  Diaqua-bis{2-[5-(2-pyrid-yl)-2H-tetra-zol-2-yl]acetato-κN,N}zinc(II).

Authors:  Bo Wang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-06-27

7.  3-(1H-Tetra-zol-5-yl)pyridinium chloride.

Authors:  Jing Dai; Miao-Jia Yu
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-05-23

8.  Triaqua-dichlorido[5-(4-pyridinio)tetra-zolato-κN]cobalt(II) monohydrate.

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Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-07-01

9.  2-(2H-Tetra-zol-5-yl)pyridinium chloride.

Authors:  Jing Dai; Xiao-Chun Wen
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-10-15
  9 in total

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