| Literature DB >> 21583201 |
Jing Dai1.
Abstract
In the cation of the title compound, C(6)H(6)N(5) (+)·ClO(4) (-), the pyridinium and tetra-zole rings form a dihedral angle of 23.6 (1)°. In the crystal structure, weak inter-molecular N-H⋯O and N-H⋯N hydrogen bonds link cations and anions into chains extending along the b axis.Entities:
Year: 2009 PMID: 21583201 PMCID: PMC2969801 DOI: 10.1107/S1600536809018200
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C6H6N5+·ClO4− | |
| Monoclinic, | Mo |
| Hall symbol: -P 2yn | Cell parameters from 2108 reflections |
| θ = 3.2–27.5° | |
| µ = 0.43 mm−1 | |
| β = 101.78 (3)° | Block, colourless |
| 0.30 × 0.25 × 0.20 mm | |
| Rigaku Mercury2 diffractometer | 2108 independent reflections |
| Radiation source: fine-focus sealed tube | 1849 reflections with |
| graphite | |
| Detector resolution: 13.6612 pixels mm-1 | θmax = 27.5°, θmin = 3.2° |
| CCD profile fitting scans | |
| Absorption correction: multi-scan ( | |
| 9546 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| (Δ/σ)max < 0.001 | |
| 2108 reflections | Δρmax = 0.29 e Å−3 |
| 146 parameters | Δρmin = −0.37 e Å−3 |
| 0 restraints | Extinction correction: |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.032 (3) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Cl1 | 0.54774 (8) | 0.68556 (3) | 0.60933 (3) | 0.02861 (15) | |
| O4 | 0.6154 (3) | 0.76134 (10) | 0.54624 (12) | 0.0425 (4) | |
| O3 | 0.2704 (3) | 0.68626 (10) | 0.60633 (13) | 0.0433 (4) | |
| O2 | 0.6150 (3) | 0.60331 (10) | 0.55912 (15) | 0.0524 (4) | |
| N1 | 0.3679 (3) | 0.59831 (10) | 0.88383 (13) | 0.0307 (3) | |
| N5 | 0.0708 (3) | 0.33991 (11) | 0.61681 (12) | 0.0317 (3) | |
| H5A | −0.0101 | 0.3029 | 0.5673 | 0.038* | |
| N4 | 0.7318 (3) | 0.51759 (10) | 0.89177 (13) | 0.0325 (4) | |
| C3 | 0.3301 (3) | 0.45759 (11) | 0.77061 (13) | 0.0247 (3) | |
| C6 | 0.4761 (3) | 0.52315 (11) | 0.85006 (13) | 0.0246 (3) | |
| N2 | 0.5614 (3) | 0.64262 (10) | 0.94760 (13) | 0.0327 (4) | |
| C5 | 0.2877 (4) | 0.31159 (12) | 0.68590 (16) | 0.0337 (4) | |
| H5 | 0.3471 | 0.2526 | 0.6810 | 0.040* | |
| N3 | 0.7722 (3) | 0.59329 (10) | 0.95023 (13) | 0.0325 (4) | |
| H3A | 0.9246 | 0.6090 | 0.9871 | 0.039* | |
| O1 | 0.6915 (3) | 0.69193 (12) | 0.72169 (12) | 0.0516 (4) | |
| C2 | 0.0996 (3) | 0.48426 (12) | 0.69840 (15) | 0.0298 (4) | |
| H2 | 0.0327 | 0.5423 | 0.7026 | 0.036* | |
| C4 | 0.4234 (4) | 0.37000 (12) | 0.76447 (15) | 0.0308 (4) | |
| H4 | 0.5756 | 0.3511 | 0.8129 | 0.037* | |
| C1 | −0.0268 (4) | 0.42336 (13) | 0.62097 (15) | 0.0334 (4) | |
| H1 | −0.1799 | 0.4401 | 0.5716 | 0.040* |
| Cl1 | 0.0264 (2) | 0.0283 (2) | 0.0283 (2) | −0.00122 (15) | −0.00104 (16) | 0.00377 (16) |
| O4 | 0.0439 (8) | 0.0389 (8) | 0.0435 (8) | −0.0015 (6) | 0.0060 (6) | 0.0151 (6) |
| O3 | 0.0268 (7) | 0.0536 (9) | 0.0482 (8) | −0.0018 (6) | 0.0044 (6) | −0.0002 (7) |
| O2 | 0.0510 (9) | 0.0366 (8) | 0.0687 (11) | 0.0080 (7) | 0.0098 (8) | −0.0074 (7) |
| N1 | 0.0302 (8) | 0.0249 (8) | 0.0349 (8) | −0.0011 (6) | 0.0013 (6) | −0.0052 (6) |
| N5 | 0.0349 (8) | 0.0290 (8) | 0.0287 (8) | −0.0066 (6) | 0.0006 (6) | −0.0077 (6) |
| N4 | 0.0284 (8) | 0.0285 (8) | 0.0371 (8) | 0.0002 (6) | −0.0016 (6) | −0.0049 (6) |
| C3 | 0.0260 (8) | 0.0227 (8) | 0.0247 (8) | −0.0023 (6) | 0.0036 (6) | −0.0002 (6) |
| C6 | 0.0262 (8) | 0.0215 (8) | 0.0244 (8) | 0.0000 (6) | 0.0012 (6) | 0.0007 (6) |
| N2 | 0.0346 (8) | 0.0266 (8) | 0.0344 (8) | −0.0041 (6) | 0.0014 (6) | −0.0049 (6) |
| C5 | 0.0423 (11) | 0.0224 (9) | 0.0348 (10) | 0.0007 (7) | 0.0037 (8) | −0.0026 (7) |
| N3 | 0.0289 (8) | 0.0293 (8) | 0.0348 (8) | −0.0038 (6) | −0.0038 (6) | −0.0047 (6) |
| O1 | 0.0471 (9) | 0.0699 (11) | 0.0306 (8) | −0.0147 (7) | −0.0092 (6) | 0.0103 (7) |
| C2 | 0.0291 (9) | 0.0249 (9) | 0.0328 (9) | 0.0015 (7) | 0.0003 (7) | −0.0014 (7) |
| C4 | 0.0331 (9) | 0.0247 (9) | 0.0304 (9) | 0.0024 (7) | −0.0030 (7) | −0.0009 (7) |
| C1 | 0.0294 (9) | 0.0345 (10) | 0.0325 (9) | −0.0008 (7) | −0.0027 (7) | −0.0011 (8) |
| Cl1—O1 | 1.4285 (15) | C3—C4 | 1.389 (2) |
| Cl1—O2 | 1.4363 (15) | C3—C2 | 1.394 (2) |
| Cl1—O3 | 1.4363 (15) | C3—C6 | 1.469 (2) |
| Cl1—O4 | 1.4433 (14) | N2—N3 | 1.312 (2) |
| N1—N2 | 1.315 (2) | C5—C4 | 1.375 (2) |
| N1—C6 | 1.347 (2) | C5—H5 | 0.9300 |
| N5—C5 | 1.332 (2) | N3—H3A | 0.8600 |
| N5—C1 | 1.338 (2) | C2—C1 | 1.373 (2) |
| N5—H5A | 0.8600 | C2—H2 | 0.9300 |
| N4—N3 | 1.321 (2) | C4—H4 | 0.9300 |
| N4—C6 | 1.327 (2) | C1—H1 | 0.9300 |
| O1—Cl1—O2 | 110.02 (11) | N3—N2—N1 | 105.86 (15) |
| O1—Cl1—O3 | 110.48 (10) | N5—C5—C4 | 119.66 (17) |
| O2—Cl1—O3 | 109.06 (9) | N5—C5—H5 | 120.2 |
| O1—Cl1—O4 | 109.12 (9) | C4—C5—H5 | 120.2 |
| O2—Cl1—O4 | 108.60 (10) | N2—N3—N4 | 114.64 (14) |
| O3—Cl1—O4 | 109.53 (9) | N2—N3—H3A | 122.7 |
| N2—N1—C6 | 105.96 (15) | N4—N3—H3A | 122.7 |
| C5—N5—C1 | 122.96 (15) | C1—C2—C3 | 118.82 (16) |
| C5—N5—H5A | 118.5 | C1—C2—H2 | 120.6 |
| C1—N5—H5A | 118.5 | C3—C2—H2 | 120.6 |
| N3—N4—C6 | 101.09 (14) | C5—C4—C3 | 119.14 (16) |
| C4—C3—C2 | 119.59 (15) | C5—C4—H4 | 120.4 |
| C4—C3—C6 | 120.69 (15) | C3—C4—H4 | 120.4 |
| C2—C3—C6 | 119.70 (15) | N5—C1—C2 | 119.82 (16) |
| N4—C6—N1 | 112.45 (15) | N5—C1—H1 | 120.1 |
| N4—C6—C3 | 123.79 (15) | C2—C1—H1 | 120.1 |
| N1—C6—C3 | 123.66 (15) |
| H··· | ||||
| N5—H5A···O3i | 0.86 | 2.28 | 2.964 (2) | 136 |
| N5—H5A···N2ii | 0.86 | 2.38 | 3.059 (2) | 136 |
| N3—H3A···O4iii | 0.86 | 2.21 | 2.884 (2) | 135 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N5—H5 | 0.86 | 2.28 | 2.964 (2) | 136 |
| N5—H5 | 0.86 | 2.38 | 3.059 (2) | 136 |
| N3—H3 | 0.86 | 2.21 | 2.884 (2) | 135 |
Symmetry codes: (i) ; (ii) ; (iii) .