Literature DB >> 21583322

Triaqua-dichlorido[5-(4-pyridinio)tetra-zolato-κN]cobalt(II) monohydrate.

Bo Wang1.   

Abstract

The title compound, [CoCl(2)(C(6)H(5)N(5))(H(2)O)(3)]·H(2)O, was synthesized by hydro-thermal reaction of CoCl(2) with 4-(2H-tetra-zol-5-yl)pyridine. The Co(II) cation is coordinated by two Cl(-) ions, one N atom from the 5-(4-pyridinio)tetra-zolate zwitterion and three O atoms from three water mol-ecules in a distorted octa-hedral geometry. In the crystal, mol-ecules are linked into a three-dimensional network by N-H⋯Cl hydrogen bonds and O-H⋯O/N/Cl hydrogen bonds involv-ing both coordinated and uncoordinated water mol-ecules. Strong π-π stacking is present between parallel pyridinium and tetra-zolate rings [centroid-centroid distances = 3.411 (2) and 3.436 (2) Å].

Entities:  

Year:  2009        PMID: 21583322      PMCID: PMC2977361          DOI: 10.1107/S1600536809024337

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background to the chemistry of tetra­zole derivatives, see: Fu et al. (2007 ▶, 2008 ▶); Huang et al. (1999 ▶); Liu et al. (1999 ▶); Wang et al. (2005 ▶). For the crystal structures of related compounds, see: Dai & Fu (2008 ▶); Wen (2008 ▶); Wittenberger & Donner (1993 ▶).

Experimental

Crystal data

[CoCl2(C6H5N5)(H2O)3]·H2O M = 349.04 Triclinic, a = 6.4900 (13) Å b = 9.842 (2) Å c = 11.159 (2) Å α = 110.72 (3)° β = 97.05 (3)° γ = 106.27 (3)° V = 620.1 (3) Å3 Z = 2 Mo Kα radiation μ = 1.83 mm−1 T = 298 K 0.15 × 0.15 × 0.10 mm

Data collection

Rigaku Mercury2 diffractometer Absorption correction: multi-scan (CrystalClear; Rigaku, 2005 ▶) T min = 0.762, T max = 0.841 6551 measured reflections 2842 independent reflections 2619 reflections with I > 2σ(I) R int = 0.019

Refinement

R[F 2 > 2σ(F 2)] = 0.026 wR(F 2) = 0.080 S = 1.18 2842 reflections 163 parameters H-atom parameters constrained Δρmax = 0.34 e Å−3 Δρmin = −0.49 e Å−3 Data collection: CrystalClear (Rigaku, 2005 ▶); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809024337/ci2831sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809024337/ci2831Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[CoCl2(C6H5N5)(H2O)3]·H2OZ = 2
Mr = 349.04F(000) = 354
Triclinic, P1Dx = 1.869 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 6.4900 (13) ÅCell parameters from 2619 reflections
b = 9.842 (2) Åθ = 3.4–27.5°
c = 11.159 (2) ŵ = 1.83 mm1
α = 110.72 (3)°T = 298 K
β = 97.05 (3)°Block, pink
γ = 106.27 (3)°0.15 × 0.15 × 0.10 mm
V = 620.1 (3) Å3
Rigaku Mercury2 diffractometer2842 independent reflections
Radiation source: fine-focus sealed tube2619 reflections with I > 2σ(I)
graphiteRint = 0.019
Detector resolution: 13.6612 pixels mm-1θmax = 27.5°, θmin = 3.4°
CCD profile fitting scansh = −8→8
Absorption correction: multi-scan (CrystalClear; Rigaku, 2005)k = −12→12
Tmin = 0.762, Tmax = 0.841l = −14→14
6551 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.026Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.080H-atom parameters constrained
S = 1.18w = 1/[σ2(Fo2) + (0.0344P)2 + 0.391P] where P = (Fo2 + 2Fc2)/3
2842 reflections(Δ/σ)max = 0.001
163 parametersΔρmax = 0.34 e Å3
0 restraintsΔρmin = −0.49 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
N50.6736 (3)0.84317 (19)0.28889 (17)0.0224 (4)
C60.6810 (3)0.8500 (2)0.41148 (19)0.0188 (4)
N10.8708 (3)1.2651 (2)0.74897 (19)0.0281 (4)
H1A0.90981.35030.81830.034*
N20.6143 (3)0.70917 (18)0.41274 (16)0.0192 (3)
N40.5984 (3)0.69178 (19)0.21085 (16)0.0224 (4)
C30.7487 (3)0.9955 (2)0.52968 (19)0.0183 (4)
C50.8008 (4)1.1310 (3)0.7624 (2)0.0301 (5)
H50.79521.13080.84520.036*
N30.5635 (3)0.61292 (18)0.28545 (16)0.0197 (3)
C20.8224 (3)1.1378 (2)0.5204 (2)0.0243 (4)
H20.83091.14190.43910.029*
C40.7372 (4)0.9933 (2)0.6525 (2)0.0253 (4)
H40.68680.89940.66050.030*
C10.8826 (4)1.2725 (2)0.6330 (2)0.0282 (5)
H10.93121.36820.62800.034*
Co1A0.41776 (4)0.36866 (3)0.20745 (2)0.01763 (9)
Cl20.08900 (9)0.38823 (6)0.08079 (5)0.02643 (13)
Cl10.73776 (8)0.35040 (6)0.33499 (5)0.02677 (13)
O1W0.5652 (3)0.33958 (19)0.04986 (14)0.0285 (3)
H1WA0.71730.35700.06560.043*
H1WB0.52540.3583−0.01970.043*
O2W0.2585 (3)0.37067 (19)0.35990 (15)0.0296 (3)
H2WA0.30370.38090.43620.044*
H2WB0.12660.38670.35660.044*
O3W0.2553 (3)0.12646 (16)0.12299 (15)0.0266 (3)
H3WA0.10360.09730.12310.040*
H3WB0.24620.08570.04000.040*
O4W0.1925 (3)0.96192 (19)0.85528 (16)0.0363 (4)
H4WA0.23061.01070.80930.054*
H4WB0.22830.88030.81400.054*
U11U22U33U12U13U23
N50.0273 (9)0.0172 (8)0.0214 (8)0.0062 (7)0.0062 (7)0.0075 (7)
C60.0169 (9)0.0168 (9)0.0209 (9)0.0050 (7)0.0041 (7)0.0066 (7)
N10.0271 (9)0.0175 (8)0.0273 (9)0.0062 (7)0.0015 (7)−0.0020 (7)
N20.0221 (8)0.0155 (7)0.0161 (8)0.0052 (6)0.0026 (6)0.0040 (6)
N40.0280 (9)0.0182 (8)0.0191 (8)0.0063 (7)0.0049 (7)0.0071 (7)
C30.0140 (8)0.0161 (9)0.0216 (9)0.0056 (7)0.0001 (7)0.0053 (7)
C50.0356 (12)0.0251 (11)0.0225 (10)0.0083 (9)0.0043 (9)0.0045 (9)
N30.0235 (8)0.0161 (8)0.0173 (8)0.0058 (7)0.0045 (7)0.0054 (6)
C20.0254 (10)0.0200 (10)0.0282 (11)0.0077 (8)0.0066 (8)0.0107 (8)
C40.0319 (11)0.0189 (9)0.0231 (10)0.0082 (8)0.0042 (8)0.0075 (8)
C10.0247 (10)0.0163 (9)0.0405 (13)0.0064 (8)0.0065 (9)0.0093 (9)
Co1A0.02082 (15)0.01475 (14)0.01550 (15)0.00521 (11)0.00386 (11)0.00507 (11)
Cl20.0265 (3)0.0249 (3)0.0237 (3)0.0102 (2)−0.0001 (2)0.0064 (2)
Cl10.0260 (3)0.0286 (3)0.0274 (3)0.0105 (2)0.0033 (2)0.0135 (2)
O1W0.0259 (8)0.0419 (9)0.0191 (7)0.0127 (7)0.0067 (6)0.0131 (7)
O2W0.0331 (9)0.0381 (9)0.0230 (8)0.0158 (7)0.0124 (7)0.0140 (7)
O3W0.0318 (8)0.0187 (7)0.0218 (7)0.0030 (6)0.0043 (6)0.0050 (6)
O4W0.0518 (11)0.0262 (8)0.0300 (9)0.0106 (8)0.0174 (8)0.0104 (7)
N5—N41.337 (2)C4—H40.93
N5—C61.340 (3)C1—H10.93
C6—N21.337 (2)Co1A—O1W2.0738 (16)
C6—C31.467 (3)Co1A—O2W2.0933 (16)
N1—C11.332 (3)Co1A—O3W2.1071 (17)
N1—C51.339 (3)Co1A—Cl12.4568 (9)
N1—H1A0.86Co1A—Cl22.5041 (9)
N2—N31.335 (2)O1W—H1WA0.94
N4—N31.323 (2)O1W—H1WB0.88
C3—C41.389 (3)O2W—H2WA0.83
C3—C21.393 (3)O2W—H2WB0.91
C5—C41.377 (3)O3W—H3WA0.94
C5—H50.93O3W—H3WB0.86
N3—Co1A2.1153 (18)O4W—H4WA0.83
C2—C11.379 (3)O4W—H4WB0.88
C2—H20.93
N4—N5—C6104.78 (16)C2—C1—H1120.1
N2—C6—N5112.14 (17)O1W—Co1A—O2W173.47 (6)
N2—C6—C3124.23 (18)O1W—Co1A—O3W87.50 (7)
N5—C6—C3123.61 (17)O2W—Co1A—O3W86.15 (7)
C1—N1—C5122.93 (19)O1W—Co1A—N392.57 (7)
C1—N1—H1A118.5O2W—Co1A—N393.86 (7)
C5—N1—H1A118.5O3W—Co1A—N3176.39 (6)
N3—N2—C6103.82 (16)O1W—Co1A—Cl189.28 (5)
N3—N4—N5108.68 (16)O2W—Co1A—Cl189.42 (5)
C4—C3—C2118.98 (19)O3W—Co1A—Cl192.27 (6)
C4—C3—C6120.36 (18)N3—Co1A—Cl191.34 (6)
C2—C3—C6120.65 (19)O1W—Co1A—Cl291.67 (5)
N1—C5—C4119.4 (2)O2W—Co1A—Cl289.64 (5)
N1—C5—H5120.3O3W—Co1A—Cl287.85 (6)
C4—C5—H5120.3N3—Co1A—Cl288.54 (6)
N4—N3—N2110.58 (15)Cl1—Co1A—Cl2179.04 (2)
N4—N3—Co1A123.34 (12)Co1A—O1W—H1WA118.8
N2—N3—Co1A125.83 (13)Co1A—O1W—H1WB125.5
C1—C2—C3119.3 (2)H1WA—O1W—H1WB108.6
C1—C2—H2120.4Co1A—O2W—H2WA131.9
C3—C2—H2120.4Co1A—O2W—H2WB120.0
C5—C4—C3119.6 (2)H2WA—O2W—H2WB106.3
C5—C4—H4120.2Co1A—O3W—H3WA112.7
C3—C4—H4120.2Co1A—O3W—H3WB112.6
N1—C1—C2119.8 (2)H3WA—O3W—H3WB100.6
N1—C1—H1120.1H4WA—O4W—H4WB98.3
D—H···AD—HH···AD···AD—H···A
O3W—H3WA···O4Wi0.951.922.858 (3)173
O3W—H3WB···O4Wii0.861.912.761 (2)170
O1W—H1WB···N4iii0.882.012.848 (2)157
O2W—H2WA···N2iv0.832.242.999 (2)153
O4W—H4WA···N5v0.832.112.935 (3)173
N1—H1A···Cl2v0.862.413.180 (2)149
O1W—H1WA···Cl2vi0.942.323.254 (2)174
O2W—H2WB···Cl1vii0.912.423.300 (2)163
O4W—H4WB···Cl1iv0.882.383.249 (2)168
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O3W—H3WA⋯O4Wi0.951.922.858 (3)173
O3W—H3WB⋯O4Wii0.861.912.761 (2)170
O1W—H1WB⋯N4iii0.882.012.848 (2)157
O2W—H2WA⋯N2iv0.832.242.999 (2)153
O4W—H4WA⋯N5v0.832.112.935 (3)173
N1—H1A⋯Cl2v0.862.413.180 (2)149
O1W—H1WA⋯Cl2vi0.942.323.254 (2)174
O2W—H2WB⋯Cl1vii0.912.423.300 (2)163
O4W—H4WB⋯Cl1iv0.882.383.249 (2)168

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) ; (vi) ; (vii) .

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