Literature DB >> 21582941

3-(1H-Tetra-zol-5-yl)pyridinium 3-(2H-tetra-zol-5-yl)pyridinium dinitrate.

Li-Jing Cui1.   

Abstract

In the title compound, C(6)H(6)N(5) (+)·NO(3) (-), there are two different isomers of the cation within the asymmetric unit. The dihedral angles between the the pyridinium and tetra-zole rings are 2.54 (15) and 13.36 (18)° in the two cations. In the crystal, the packing of ions is stabilized by N-H⋯O and N-H⋯(O,O) hydrogen bonds, forming clusters composed of four ion pairs.

Entities:  

Year:  2009        PMID: 21582941      PMCID: PMC2969333          DOI: 10.1107/S160053680901839X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to tetra­zole derivatives, see: Dai & Fu (2008 ▶); Wang et al. (2005 ▶); Wen (2008 ▶); Xiong et al. (2002 ▶).

Experimental

Crystal data

C6H6N5 +·NO3 M = 210.17 Triclinic, a = 6.9157 (14) Å b = 10.575 (2) Å c = 13.346 (3) Å α = 110.10 (3)° β = 100.65 (3)° γ = 95.87 (3)° V = 886.2 (3) Å3 Z = 4 Mo Kα radiation μ = 0.13 mm−1 T = 298 K 0.35 × 0.30 × 0.15 mm

Data collection

Rigaku Mercury2 diffractometer Absorption correction: multi-scan (CrystalClear; Rigaku, 2005 ▶) T min = 0.956, T max = 0.981 9175 measured reflections 4035 independent reflections 2272 reflections with I > 2σ(I) R int = 0.045

Refinement

R[F 2 > 2σ(F 2)] = 0.057 wR(F 2) = 0.150 S = 1.03 4035 reflections 279 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.18 e Å−3 Δρmin = −0.22 e Å−3 Data collection: CrystalClear (Rigaku, 2005 ▶); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S160053680901839X/hb2945sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S160053680901839X/hb2945Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C6H6N5+·NO3Z = 4
Mr = 210.17F(000) = 432
Triclinic, P1Dx = 1.575 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 6.9157 (14) ÅCell parameters from 4035 reflections
b = 10.575 (2) Åθ = 3.1–27.5°
c = 13.346 (3) ŵ = 0.13 mm1
α = 110.10 (3)°T = 298 K
β = 100.65 (3)°Block, colourless
γ = 95.87 (3)°0.35 × 0.30 × 0.15 mm
V = 886.2 (3) Å3
Rigaku Mercury2 diffractometer4035 independent reflections
Radiation source: fine-focus sealed tube2272 reflections with I > 2σ(I)
graphiteRint = 0.045
Detector resolution: 13.6612 pixels mm-1θmax = 27.5°, θmin = 3.1°
CCD profile fitting scansh = −8→8
Absorption correction: multi-scan (CrystalClear; Rigaku, 2005)k = −13→13
Tmin = 0.956, Tmax = 0.981l = −17→17
9175 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.057Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.150H atoms treated by a mixture of independent and constrained refinement
S = 1.03w = 1/[σ2(Fo2) + (0.0621P)2 + 0.11P] where P = (Fo2 + 2Fc2)/3
4035 reflections(Δ/σ)max < 0.001
279 parametersΔρmax = 0.18 e Å3
0 restraintsΔρmin = −0.22 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O40.6923 (3)0.42367 (18)0.16340 (15)0.0676 (5)
N120.7836 (3)0.3552 (2)0.09506 (16)0.0538 (5)
O50.8211 (3)0.24401 (18)0.09476 (15)0.0736 (5)
N50.6669 (3)0.30395 (19)0.31822 (16)0.0562 (5)
H5A0.66910.35100.27700.067*
O60.8282 (3)0.40305 (19)0.02794 (15)0.0719 (5)
N60.3306 (3)1.0327 (2)0.16715 (18)0.0631 (6)
C30.6604 (3)0.1553 (2)0.44515 (18)0.0521 (6)
H30.65770.10280.48850.063*
N10.2697 (3)0.3533 (2)0.53331 (16)0.0581 (5)
C50.5298 (3)0.3174 (2)0.37811 (18)0.0499 (6)
H50.43870.37550.37450.060*
C120.3716 (3)0.9175 (2)0.17583 (18)0.0478 (5)
C60.3778 (3)0.2557 (2)0.51234 (17)0.0466 (5)
N90.2512 (3)0.8800 (2)0.23196 (17)0.0578 (5)
C40.5260 (3)0.2439 (2)0.44512 (17)0.0446 (5)
C100.5230 (3)0.8456 (2)0.13170 (17)0.0438 (5)
N20.1669 (3)0.3194 (3)0.59678 (17)0.0641 (6)
N40.3414 (3)0.1670 (2)0.56134 (18)0.0687 (6)
N70.1816 (3)1.0644 (2)0.2193 (2)0.0723 (6)
C110.5523 (3)0.7245 (2)0.14313 (19)0.0524 (6)
H110.47820.68920.18210.063*
C10.8009 (4)0.2213 (3)0.3189 (2)0.0607 (7)
H10.89510.21660.27680.073*
N30.2040 (4)0.2098 (3)0.61492 (19)0.0750 (7)
C20.7973 (4)0.1445 (2)0.3817 (2)0.0577 (6)
H20.88720.08490.38180.069*
C90.6383 (4)0.8947 (3)0.0739 (2)0.0609 (7)
H90.62470.97780.06640.073*
N100.6860 (3)0.6578 (2)0.09869 (18)0.0673 (6)
H10A0.70340.58280.10790.081*
N80.1327 (3)0.9736 (2)0.25866 (19)0.0722 (6)
C70.7937 (4)0.7011 (3)0.0409 (2)0.0765 (8)
H70.88350.64960.00960.092*
C80.7731 (4)0.8206 (3)0.0275 (2)0.0752 (8)
H80.84900.8522−0.01260.090*
N110.7936 (3)0.4430 (2)0.71227 (17)0.0552 (5)
O30.6532 (3)0.4772 (2)0.75145 (17)0.0817 (6)
O20.8610 (3)0.3403 (2)0.71981 (19)0.0878 (6)
O10.8712 (3)0.5025 (2)0.66120 (17)0.0809 (6)
H9A0.236 (4)0.802 (3)0.248 (2)0.069 (8)*
H2A0.075 (4)0.361 (3)0.625 (2)0.073 (9)*
U11U22U33U12U13U23
O40.0790 (12)0.0713 (11)0.0790 (12)0.0375 (10)0.0464 (10)0.0393 (10)
N120.0476 (11)0.0620 (13)0.0548 (12)0.0134 (10)0.0152 (10)0.0229 (11)
O50.0974 (14)0.0641 (12)0.0720 (12)0.0379 (11)0.0306 (11)0.0287 (10)
N50.0711 (14)0.0495 (11)0.0544 (12)0.0048 (10)0.0232 (11)0.0245 (10)
O60.0786 (13)0.0856 (13)0.0746 (12)0.0245 (10)0.0400 (11)0.0441 (11)
N60.0656 (14)0.0485 (12)0.0753 (15)0.0186 (10)0.0165 (12)0.0207 (11)
C30.0610 (15)0.0476 (13)0.0510 (14)0.0125 (11)0.0136 (12)0.0212 (11)
N10.0603 (13)0.0582 (12)0.0607 (13)0.0165 (10)0.0265 (11)0.0201 (10)
C50.0607 (15)0.0390 (12)0.0513 (13)0.0091 (10)0.0178 (12)0.0158 (10)
C120.0515 (14)0.0453 (13)0.0438 (12)0.0070 (10)0.0082 (11)0.0150 (10)
C60.0520 (14)0.0427 (12)0.0435 (12)0.0067 (10)0.0136 (11)0.0134 (10)
N90.0576 (13)0.0595 (13)0.0640 (13)0.0192 (11)0.0237 (11)0.0252 (11)
C40.0514 (13)0.0368 (11)0.0438 (12)0.0064 (10)0.0124 (11)0.0126 (10)
C100.0459 (12)0.0440 (12)0.0420 (12)0.0096 (10)0.0087 (10)0.0168 (10)
N20.0613 (14)0.0750 (16)0.0570 (13)0.0155 (12)0.0265 (12)0.0182 (12)
N40.0868 (16)0.0672 (14)0.0757 (15)0.0224 (12)0.0410 (13)0.0417 (12)
N70.0666 (15)0.0580 (14)0.0874 (17)0.0235 (11)0.0184 (13)0.0173 (13)
C110.0530 (14)0.0531 (14)0.0543 (14)0.0168 (11)0.0129 (12)0.0217 (11)
C10.0588 (16)0.0592 (15)0.0626 (16)0.0078 (12)0.0244 (13)0.0165 (13)
N30.0845 (17)0.0857 (17)0.0724 (15)0.0164 (13)0.0395 (14)0.0397 (13)
C20.0575 (15)0.0568 (14)0.0624 (15)0.0190 (12)0.0210 (13)0.0206 (13)
C90.0582 (15)0.0695 (16)0.0628 (16)0.0135 (13)0.0128 (13)0.0342 (14)
N100.0663 (14)0.0599 (13)0.0762 (15)0.0272 (11)0.0133 (13)0.0234 (12)
N80.0632 (14)0.0714 (15)0.0802 (16)0.0264 (12)0.0262 (12)0.0170 (13)
C70.0626 (18)0.092 (2)0.0760 (19)0.0310 (16)0.0234 (16)0.0235 (17)
C80.0604 (17)0.111 (2)0.0685 (18)0.0207 (16)0.0271 (15)0.0427 (18)
N110.0512 (12)0.0589 (13)0.0604 (13)0.0121 (10)0.0160 (11)0.0260 (11)
O30.0753 (13)0.0926 (14)0.1060 (15)0.0389 (11)0.0537 (12)0.0489 (12)
O20.0878 (14)0.0793 (13)0.1334 (18)0.0386 (11)0.0536 (13)0.0643 (13)
O10.0872 (14)0.0878 (13)0.0980 (15)0.0216 (11)0.0476 (12)0.0565 (12)
O4—N121.268 (2)C10—C111.372 (3)
N12—O51.229 (2)C10—C91.385 (3)
N12—O61.239 (2)N2—N31.304 (3)
N5—C51.337 (3)N2—H2A0.88 (3)
N5—C11.338 (3)N4—N31.318 (3)
N5—H5A0.8600N7—N81.288 (3)
N6—C121.317 (3)C11—N101.324 (3)
N6—N71.354 (3)C11—H110.9300
C3—C21.370 (3)C1—C21.354 (3)
C3—C41.386 (3)C1—H10.9300
C3—H30.9300C2—H20.9300
N1—N21.315 (3)C9—C81.377 (4)
N1—C61.319 (3)C9—H90.9300
C5—C41.374 (3)N10—C71.321 (3)
C5—H50.9300N10—H10A0.8600
C12—N91.334 (3)C7—C81.354 (4)
C12—C101.450 (3)C7—H70.9300
C6—N41.343 (3)C8—H80.9300
C6—C41.469 (3)N11—O31.215 (2)
N9—N81.345 (3)N11—O11.228 (2)
N9—H9A0.93 (2)N11—O21.253 (2)
O5—N12—O6122.0 (2)N3—N2—H2A118.7 (17)
O5—N12—O4120.4 (2)N1—N2—H2A126.4 (17)
O6—N12—O4117.6 (2)N3—N4—C6105.8 (2)
C5—N5—C1123.6 (2)N8—N7—N6110.6 (2)
C5—N5—H5A118.2N10—C11—C10120.0 (2)
C1—N5—H5A118.2N10—C11—H11120.0
C12—N6—N7106.2 (2)C10—C11—H11120.0
C2—C3—C4120.4 (2)N5—C1—C2119.0 (2)
C2—C3—H3119.8N5—C1—H1120.5
C4—C3—H3119.8C2—C1—H1120.5
N2—N1—C6101.2 (2)N2—N3—N4105.6 (2)
N5—C5—C4118.8 (2)C1—C2—C3119.6 (2)
N5—C5—H5120.6C1—C2—H2120.2
C4—C5—H5120.6C3—C2—H2120.2
N6—C12—N9108.2 (2)C8—C9—C10120.1 (2)
N6—C12—C10125.2 (2)C8—C9—H9120.0
N9—C12—C10126.7 (2)C10—C9—H9120.0
N1—C6—N4112.5 (2)C7—N10—C11123.0 (2)
N1—C6—C4125.0 (2)C7—N10—H10A118.5
N4—C6—C4122.4 (2)C11—N10—H10A118.5
C12—N9—N8108.6 (2)N7—N8—N9106.5 (2)
C12—N9—H9A129.7 (16)N10—C7—C8119.8 (3)
N8—N9—H9A121.5 (16)N10—C7—H7120.1
C5—C4—C3118.6 (2)C8—C7—H7120.1
C5—C4—C6120.5 (2)C7—C8—C9119.2 (3)
C3—C4—C6120.9 (2)C7—C8—H8120.4
C11—C10—C9117.9 (2)C9—C8—H8120.4
C11—C10—C12120.9 (2)O3—N11—O1122.8 (2)
C9—C10—C12121.2 (2)O3—N11—O2120.1 (2)
N3—N2—N1114.9 (2)O1—N11—O2117.1 (2)
D—H···AD—HH···AD···AD—H···A
N9—H9A···O2i0.93 (2)1.80 (3)2.700 (3)164 (2)
N2—H2A···O1ii0.88 (3)2.16 (3)2.998 (3)161 (2)
N2—H2A···O2ii0.88 (3)2.16 (3)2.890 (3)140 (2)
N5—H5A···O40.861.942.791 (3)168
N10—H10A···O40.862.062.891 (3)163
N10—H10A···O60.862.192.873 (3)137
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N9—H9A⋯O2i0.93 (2)1.80 (3)2.700 (3)164 (2)
N2—H2A⋯O1ii0.88 (3)2.16 (3)2.998 (3)161 (2)
N2—H2A⋯O2ii0.88 (3)2.16 (3)2.890 (3)140 (2)
N5—H5A⋯O40.861.942.791 (3)168
N10—H10A⋯O40.862.062.891 (3)163
N10—H10A⋯O60.862.192.873 (3)137

Symmetry codes: (i) ; (ii) .

  5 in total

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2.  A short history of SHELX.

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Authors:  Xi-Sen Wang; Yun-Zhi Tang; Xue-Feng Huang; Zhi-Rong Qu; Chi-Ming Che; Philip Wai Hong Chan; Ren-Gen Xiong
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4.  2-{4-[5-(3-Pyrid-yl)-2H-tetra-zol-2-ylmeth-yl]phen-yl}benzonitrile.

Authors:  Wei Dai; Da-Wei Fu
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-07-09

5.  Diaqua-[5-(2-pyrid-yl)tetra-zolato-κN,N]manganese(II).

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Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-05-03
  5 in total

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