| Literature DB >> 21583175 |
Abstract
In the cation of the title compound, C(6)H(6)N(5) (+)·NO(3) (-), the dihedral angle between the pyridinium and tetra-zole rings is 8.2 (2)°. The constituent ions of the compound are linked via N-H⋯O hydrogen bonds, forming helical chains running along the b axis. C-H⋯N and C-H⋯O hydrogen bonds are also observed.Entities:
Year: 2009 PMID: 21583175 PMCID: PMC2969575 DOI: 10.1107/S1600536809018078
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C6H6N5+·NO3− | |
| Monoclinic, | Mo |
| Hall symbol: -C 2yc | Cell parameters from 1999 reflections |
| θ = 3.8–27.5° | |
| µ = 0.13 mm−1 | |
| β = 114.77 (3)° | Block, colourless |
| 0.20 × 0.15 × 0.15 mm | |
| Rigaku Mercury2 diffractometer | 1999 independent reflections |
| Radiation source: fine-focus sealed tube | 1033 reflections with |
| graphite | |
| Detector resolution: 13.6612 pixels mm-1 | θmax = 27.5°, θmin = 3.8° |
| ω scans | |
| Absorption correction: multi-scan ( | |
| 8427 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 1999 reflections | (Δ/σ)max = 0.001 |
| 136 parameters | Δρmax = 0.34 e Å−3 |
| 0 restraints | Δρmin = −0.36 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| N1 | 0.11658 (15) | 0.9420 (6) | 0.51774 (16) | 0.0383 (7) | |
| H1 | 0.1239 | 1.0055 | 0.5623 | 0.046* | |
| C6 | 0.21176 (18) | 0.6182 (7) | 0.58420 (19) | 0.0362 (8) | |
| N2 | 0.24979 (17) | 0.3908 (6) | 0.58539 (17) | 0.0485 (8) | |
| C1 | 0.15732 (18) | 0.7297 (7) | 0.51387 (19) | 0.0364 (8) | |
| N5 | 0.23230 (16) | 0.7307 (6) | 0.65302 (17) | 0.0447 (8) | |
| C3 | 0.0917 (2) | 0.7442 (8) | 0.3768 (2) | 0.0506 (10) | |
| H3 | 0.0831 | 0.6771 | 0.3283 | 0.061* | |
| N4 | 0.28398 (16) | 0.5624 (6) | 0.69580 (17) | 0.0463 (8) | |
| H4A | 0.3082 | 0.5846 | 0.7445 | 0.056* | |
| N3 | 0.29538 (17) | 0.3572 (7) | 0.65769 (18) | 0.0518 (9) | |
| C4 | 0.0518 (2) | 0.9615 (9) | 0.3841 (2) | 0.0520 (11) | |
| H4 | 0.0161 | 1.0411 | 0.3408 | 0.062* | |
| C2 | 0.14442 (19) | 0.6270 (8) | 0.4418 (2) | 0.0436 (9) | |
| H2 | 0.1711 | 0.4798 | 0.4371 | 0.052* | |
| C5 | 0.0657 (2) | 1.0571 (8) | 0.4558 (2) | 0.0446 (9) | |
| H5 | 0.0395 | 1.2039 | 0.4615 | 0.053* | |
| N6 | 0.41263 (16) | 0.8821 (6) | 0.85439 (18) | 0.0434 (8) | |
| O3 | 0.37035 (14) | 0.6773 (5) | 0.84530 (13) | 0.0533 (8) | |
| O2 | 0.44457 (14) | 0.9758 (6) | 0.91958 (15) | 0.0570 (8) | |
| O1 | 0.41958 (16) | 0.9759 (6) | 0.79835 (16) | 0.0672 (9) |
| N1 | 0.0387 (17) | 0.0438 (18) | 0.0341 (16) | −0.0043 (14) | 0.0169 (14) | −0.0018 (14) |
| C6 | 0.0362 (19) | 0.037 (2) | 0.038 (2) | −0.0036 (17) | 0.0179 (16) | −0.0003 (16) |
| N2 | 0.0487 (19) | 0.054 (2) | 0.0364 (18) | 0.0079 (16) | 0.0115 (15) | −0.0008 (15) |
| C1 | 0.0372 (19) | 0.039 (2) | 0.036 (2) | −0.0052 (16) | 0.0181 (17) | −0.0005 (16) |
| N5 | 0.0421 (18) | 0.0480 (19) | 0.0379 (18) | 0.0021 (15) | 0.0108 (14) | −0.0026 (15) |
| C3 | 0.057 (3) | 0.058 (3) | 0.038 (2) | −0.015 (2) | 0.020 (2) | −0.0046 (19) |
| N4 | 0.0434 (18) | 0.0510 (19) | 0.0352 (17) | −0.0010 (16) | 0.0073 (14) | −0.0014 (16) |
| N3 | 0.047 (2) | 0.055 (2) | 0.049 (2) | 0.0072 (17) | 0.0154 (17) | −0.0032 (16) |
| C4 | 0.041 (2) | 0.068 (3) | 0.038 (2) | −0.009 (2) | 0.0078 (18) | 0.009 (2) |
| C2 | 0.042 (2) | 0.049 (2) | 0.043 (2) | −0.0064 (18) | 0.0212 (18) | −0.0027 (18) |
| C5 | 0.040 (2) | 0.046 (2) | 0.045 (2) | −0.0021 (17) | 0.0155 (19) | 0.0074 (18) |
| N6 | 0.0382 (18) | 0.049 (2) | 0.0414 (19) | 0.0006 (15) | 0.0156 (15) | −0.0023 (16) |
| O3 | 0.0543 (17) | 0.0578 (17) | 0.0413 (16) | −0.0174 (14) | 0.0136 (13) | −0.0034 (13) |
| O2 | 0.0527 (18) | 0.070 (2) | 0.0460 (17) | −0.0192 (14) | 0.0180 (14) | −0.0189 (14) |
| O1 | 0.077 (2) | 0.080 (2) | 0.0499 (17) | −0.0107 (17) | 0.0314 (16) | 0.0090 (16) |
| N1—C5 | 1.329 (4) | C3—H3 | 0.93 |
| N1—C1 | 1.352 (4) | N4—N3 | 1.318 (4) |
| N1—H1 | 0.86 | N4—H4A | 0.86 |
| C6—N5 | 1.323 (4) | C4—C5 | 1.363 (5) |
| C6—N2 | 1.352 (4) | C4—H4 | 0.93 |
| C6—C1 | 1.446 (5) | C2—H2 | 0.93 |
| N2—N3 | 1.314 (4) | C5—H5 | 0.93 |
| C1—C2 | 1.386 (5) | N6—O1 | 1.228 (3) |
| N5—N4 | 1.318 (4) | N6—O2 | 1.229 (4) |
| C3—C4 | 1.382 (5) | N6—O3 | 1.286 (4) |
| C3—C2 | 1.383 (5) | ||
| C5—N1—C1 | 123.0 (3) | N5—N4—H4A | 122.8 |
| C5—N1—H1 | 118.5 | N3—N4—H4A | 122.8 |
| C1—N1—H1 | 118.5 | N2—N3—N4 | 106.0 (3) |
| N5—C6—N2 | 112.7 (3) | C5—C4—C3 | 118.9 (4) |
| N5—C6—C1 | 124.7 (3) | C5—C4—H4 | 120.5 |
| N2—C6—C1 | 122.6 (3) | C3—C4—H4 | 120.5 |
| N3—N2—C6 | 105.6 (3) | C3—C2—C1 | 119.8 (4) |
| N1—C1—C2 | 117.9 (3) | C3—C2—H2 | 120.1 |
| N1—C1—C6 | 119.3 (3) | C1—C2—H2 | 120.1 |
| C2—C1—C6 | 122.8 (3) | N1—C5—C4 | 120.5 (4) |
| N4—N5—C6 | 101.3 (3) | N1—C5—H5 | 119.8 |
| C4—C3—C2 | 119.8 (4) | C4—C5—H5 | 119.8 |
| C4—C3—H3 | 120.1 | O1—N6—O2 | 122.7 (3) |
| C2—C3—H3 | 120.1 | O1—N6—O3 | 119.3 (3) |
| N5—N4—N3 | 114.4 (3) | O2—N6—O3 | 118.0 (3) |
| H··· | ||||
| N1—H1···O3i | 0.86 | 1.92 | 2.772 (4) | 172 |
| N4—H4A···O3 | 0.86 | 1.87 | 2.717 (4) | 170 |
| C2—H2···N2ii | 0.93 | 2.58 | 3.507 (5) | 173 |
| C3—H3···O1iii | 0.93 | 2.52 | 3.435 (5) | 171 |
| C5—H5···O2i | 0.93 | 2.54 | 3.218 (5) | 130 |
| C5—H5···O2iv | 0.93 | 2.36 | 3.223 (5) | 155 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1⋯O3i | 0.86 | 1.92 | 2.772 (4) | 172 |
| N4—H4 | 0.86 | 1.87 | 2.717 (4) | 170 |
| C2—H2⋯N2ii | 0.93 | 2.58 | 3.507 (5) | 173 |
| C3—H3⋯O1iii | 0.93 | 2.52 | 3.435 (5) | 171 |
| C5—H5⋯O2i | 0.93 | 2.54 | 3.218 (5) | 130 |
| C5—H5⋯O2iv | 0.93 | 2.36 | 3.223 (5) | 155 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .