Literature DB >> 20959075

How long does it take to establish a morphogen gradient?

Alexander M Berezhkovskii, Christine Sample, Stanislav Y Shvartsman.   

Abstract

A morphogen gradient is defined as a concentration field of a molecule that acts as a dose-dependent regulator of cell differentiation. One of the key questions in studies of morphogen gradients is whether they reach steady states on timescales relevant for developmental patterning. We propose a systematic approach for addressing this question and illustrate it by analyzing several models that account for diffusion and degradation of locally produced chemical signals.
Copyright © 2010 Biophysical Society. Published by Elsevier Inc. All rights reserved.

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Year:  2010        PMID: 20959075      PMCID: PMC2955507          DOI: 10.1016/j.bpj.2010.07.045

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  11 in total

1.  Diffusion control of protein phosphorylation in signal transduction pathways.

Authors:  B N Kholodenko; G C Brown; J B Hoek
Journal:  Biochem J       Date:  2000-09-15       Impact factor: 3.857

2.  Kinetics of morphogen gradient formation.

Authors:  Anna Kicheva; Periklis Pantazis; Tobias Bollenbach; Yannis Kalaidzidis; Thomas Bittig; Frank Jülicher; Marcos González-Gaitán
Journal:  Science       Date:  2007-01-26       Impact factor: 47.728

Review 3.  Morphogen gradient formation.

Authors:  Ortrud Wartlick; Anna Kicheva; Marcos González-Gaitán
Journal:  Cold Spring Harb Perspect Biol       Date:  2009-09       Impact factor: 10.005

Review 4.  Regulative feedback in pattern formation: towards a general relativistic theory of positional information.

Authors:  Johannes Jaeger; David Irons; Nick Monk
Journal:  Development       Date:  2008-10       Impact factor: 6.868

5.  Fgf8 morphogen gradient forms by a source-sink mechanism with freely diffusing molecules.

Authors:  Shuizi Rachel Yu; Markus Burkhardt; Matthias Nowak; Jonas Ries; Zdenek Petrásek; Steffen Scholpp; Petra Schwille; Michael Brand
Journal:  Nature       Date:  2009-09-09       Impact factor: 49.962

6.  When it pays to rush: interpreting morphogen gradients prior to steady-state.

Authors:  Timothy Saunders; Martin Howard
Journal:  Phys Biol       Date:  2009-11-26       Impact factor: 2.583

7.  Diffusion in embryogenesis.

Authors:  F Crick
Journal:  Nature       Date:  1970-01-31       Impact factor: 49.962

Review 8.  The bicoid morphogen system.

Authors:  Aude Porcher; Nathalie Dostatni
Journal:  Curr Biol       Date:  2010-03-09       Impact factor: 10.834

9.  Formation of the bicoid morphogen gradient: an mRNA gradient dictates the protein gradient.

Authors:  Alexander Spirov; Khalid Fahmy; Martina Schneider; Erich Frei; Markus Noll; Stefan Baumgartner
Journal:  Development       Date:  2009-02       Impact factor: 6.868

10.  Pre-steady-state decoding of the Bicoid morphogen gradient.

Authors:  Sven Bergmann; Oded Sandler; Hila Sberro; Sara Shnider; Eyal Schejter; Ben-Zion Shilo; Naama Barkai
Journal:  PLoS Biol       Date:  2007-02       Impact factor: 8.029

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  17 in total

1.  Physical interpretation of mean local accumulation time of morphogen gradient formation.

Authors:  Alexander M Berezhkovskii; Stanislav Y Shvartsman
Journal:  J Chem Phys       Date:  2011-10-21       Impact factor: 3.488

2.  Measurement and perturbation of morphogen lifetime: effects on gradient shape.

Authors:  Jeffrey A Drocco; Oliver Grimm; David W Tank; Eric Wieschaus
Journal:  Biophys J       Date:  2011-10-19       Impact factor: 4.033

3.  Kinetics of receptor occupancy during morphogen gradient formation.

Authors:  Alexander M Berezhkovskii; Stanislav Y Shvartsman
Journal:  J Chem Phys       Date:  2013-06-28       Impact factor: 3.488

4.  Local kinetics of morphogen gradients.

Authors:  Peter V Gordon; Christine Sample; Alexander M Berezhkovskii; Cyrill B Muratov; Stanislav Y Shvartsman
Journal:  Proc Natl Acad Sci U S A       Date:  2011-03-28       Impact factor: 11.205

5.  Ordinary differential equation for local accumulation time.

Authors:  Alexander M Berezhkovskii
Journal:  J Chem Phys       Date:  2011-08-21       Impact factor: 3.488

6.  Spatiotemporal analysis of different mechanisms for interpreting morphogen gradients.

Authors:  David M Richards; Timothy E Saunders
Journal:  Biophys J       Date:  2015-04-21       Impact factor: 4.033

7.  Formation of morphogen gradients: local accumulation time.

Authors:  Alexander M Berezhkovskii; Christine Sample; Stanislav Y Shvartsman
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2011-05-06

8.  On the GFP-based analysis of dynamic concentration profiles.

Authors:  Alexander M Berezhkovskii; Stanislav Y Shvartsman
Journal:  Biophys J       Date:  2014-02-04       Impact factor: 4.033

9.  Relaxation Times of Ligand-Receptor Complex Formation Control T Cell Activation.

Authors:  Hamid Teimouri; Anatoly B Kolomeisky
Journal:  Biophys J       Date:  2020-06-09       Impact factor: 4.033

10.  Spatially Different Tissue-Scale Diffusivity Shapes ANGUSTIFOLIA3 Gradient in Growing Leaves.

Authors:  Kensuke Kawade; Hirokazu Tanimoto; Gorou Horiguchi; Hirokazu Tsukaya
Journal:  Biophys J       Date:  2017-09-05       Impact factor: 4.033

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