Literature DB >> 19940351

When it pays to rush: interpreting morphogen gradients prior to steady-state.

Timothy Saunders1, Martin Howard.   

Abstract

During development, morphogen gradients precisely determine the position of gene expression boundaries despite the inevitable presence of fluctuations. Recent experiments suggest that some morphogen gradients may be interpreted prior to reaching steady-state. Theoretical work has predicted that such systems will be more robust to embryo-to-embryo fluctuations. By analyzing two experimentally motivated models of morphogen gradient formation, we investigate the positional precision of gene expression boundaries determined by pre-steady-state morphogen gradients in the presence of embryo-to-embryo fluctuations, internal biochemical noise and variations in the timing of morphogen measurement. Morphogens that are direct transcription factors are found to be particularly sensitive to internal noise when interpreted prior to steady-state, disadvantaging early measurement, even in the presence of large embryo-to-embryo fluctuations. Morphogens interpreted by cell-surface receptors can be measured prior to steady-state without significant decrease in positional precision provided fluctuations in the timing of measurement are small. Applying our results to experiment, we predict that Bicoid, a transcription factor morphogen in Drosophila, is unlikely to be interpreted prior to reaching steady-state. We also predict that Activin in Xenopus and Nodal in zebrafish, morphogens interpreted by cell-surface receptors, can be decoded in pre-steady-state.

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Year:  2009        PMID: 19940351     DOI: 10.1088/1478-3975/6/4/046020

Source DB:  PubMed          Journal:  Phys Biol        ISSN: 1478-3967            Impact factor:   2.583


  13 in total

1.  Physical interpretation of mean local accumulation time of morphogen gradient formation.

Authors:  Alexander M Berezhkovskii; Stanislav Y Shvartsman
Journal:  J Chem Phys       Date:  2011-10-21       Impact factor: 3.488

2.  Shaping a morphogen gradient for positional precision.

Authors:  Feng He; Timothy E Saunders; Ying Wen; David Cheung; Renjie Jiao; Pieter Rein ten Wolde; Martin Howard; Jun Ma
Journal:  Biophys J       Date:  2010-08-04       Impact factor: 4.033

3.  How long does it take to establish a morphogen gradient?

Authors:  Alexander M Berezhkovskii; Christine Sample; Stanislav Y Shvartsman
Journal:  Biophys J       Date:  2010-10-20       Impact factor: 4.033

4.  Local kinetics of morphogen gradients.

Authors:  Peter V Gordon; Christine Sample; Alexander M Berezhkovskii; Cyrill B Muratov; Stanislav Y Shvartsman
Journal:  Proc Natl Acad Sci U S A       Date:  2011-03-28       Impact factor: 11.205

5.  Ordinary differential equation for local accumulation time.

Authors:  Alexander M Berezhkovskii
Journal:  J Chem Phys       Date:  2011-08-21       Impact factor: 3.488

6.  Spatiotemporal analysis of different mechanisms for interpreting morphogen gradients.

Authors:  David M Richards; Timothy E Saunders
Journal:  Biophys J       Date:  2015-04-21       Impact factor: 4.033

7.  Improved readout precision of the Bicoid morphogen gradient by early decoding.

Authors:  Zvi Tamari; Naama Barkai
Journal:  J Biol Phys       Date:  2011-12-03       Impact factor: 1.365

8.  Analysis of mutants with altered shh activity and posterior digit loss supports a biphasic model for shh function as a morphogen and mitogen.

Authors:  Jianjian Zhu; Susan Mackem
Journal:  Dev Dyn       Date:  2011-05       Impact factor: 3.780

9.  Noise drives sharpening of gene expression boundaries in the zebrafish hindbrain.

Authors:  Lei Zhang; Kelly Radtke; Likun Zheng; Anna Q Cai; Thomas F Schilling; Qing Nie
Journal:  Mol Syst Biol       Date:  2012       Impact factor: 11.429

10.  A matter of timing and precision.

Authors:  Johannes Jaeger
Journal:  Mol Syst Biol       Date:  2010-11-16       Impact factor: 11.429

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