Literature DB >> 16331423

Unambiguous assignment of NMR protein backbone signals with a time-shared triple-resonance experiment.

Dominique P Frueh1, Haribabu Arthanari, Gerhard Wagner.   

Abstract

An experiment that provides a simple procedure to assign backbone nuclei in proteins is presented. The method relies on time-shared evolution of the coherences present in the (HN)NCAHA and (HA)CANNH experiments. By exploiting the fact that some of the coherences are common to both experiments the alpha and amide protons that are simultaneously detected are correlated with each other and with nitrogen and carbon nuclei. Thus, simultaneous assignment of Halpha, H(N), Calpha and N signals is achieved in a single 3D spectrum. The experiment was tested on the streptococcal protein G B1 domain (GB1) which was easily assigned using a "stairway" procedure and on an 11 kDa domain of the yeast transcriptional co-activator Gal11.

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Year:  2005        PMID: 16331423     DOI: 10.1007/s10858-005-3204-z

Source DB:  PubMed          Journal:  J Biomol NMR        ISSN: 0925-2738            Impact factor:   2.835


  17 in total

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Authors:  David Rovnyak; Dominique P Frueh; Mallika Sastry; Zhen-Yu J Sun; Alan S Stern; Jeffrey C Hoch; Gerhard Wagner
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4.  MUNIN: a new approach to multi-dimensional NMR spectra interpretation.

Authors:  V Y Orekhov; I V Ibraghimov; M Billeter
Journal:  J Biomol NMR       Date:  2001-05       Impact factor: 2.835

5.  A simultaneous (15)N, (1)H- and (13)C, (1)H-HSQC with sensitivity enhancement and a heteronuclear gradient echo.

Authors:  M Sattler; M Maurer; J Schleucher; C Griesinger
Journal:  J Biomol NMR       Date:  1995-01       Impact factor: 2.835

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Authors:  B A Johnson; R A Blevins
Journal:  J Biomol NMR       Date:  1994-09       Impact factor: 2.835

7.  Application of nonlinear sampling schemes to COSY-type spectra.

Authors:  P Schmieder; A S Stern; G Wagner; J C Hoch
Journal:  J Biomol NMR       Date:  1993-09       Impact factor: 2.835

8.  Amino acid type determination in the sequential assignment procedure of uniformly 13C/15N-enriched proteins.

Authors:  S Grzesiek; A Bax
Journal:  J Biomol NMR       Date:  1993-03       Impact factor: 2.835

9.  A general method for assigning NMR spectra of denatured proteins using 3D HC(CO)NH-TOCSY triple resonance experiments.

Authors:  T M Logan; E T Olejniczak; R X Xu; S W Fesik
Journal:  J Biomol NMR       Date:  1993-03       Impact factor: 2.835

10.  Gradient-tailored excitation for single-quantum NMR spectroscopy of aqueous solutions.

Authors:  M Piotto; V Saudek; V Sklenár
Journal:  J Biomol NMR       Date:  1992-11       Impact factor: 2.835

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  14 in total

1.  4D APSY-HBCB(CG)CDHD experiment for automated assignment of aromatic amino acid side chains in proteins.

Authors:  Barbara Krähenbühl; Sebastian Hiller; Gerhard Wider
Journal:  J Biomol NMR       Date:  2011-09-27       Impact factor: 2.835

2.  Simultaneous alpha/beta spin-state selection for (13)C and (15)N from a time-shared HSQC-IPAP experiment.

Authors:  Pau Nolis; Teodor Parella
Journal:  J Biomol NMR       Date:  2006-12-12       Impact factor: 2.835

3.  HNCA+, HNCO+, and HNCACB+ experiments: improved performance by simultaneous detection of orthogonal coherence transfer pathways.

Authors:  Sergio Gil-Caballero; Adrien Favier; Bernhard Brutscher
Journal:  J Biomol NMR       Date:  2014-07-24       Impact factor: 2.835

4.  CACA-TOCSY with alternate 13C-12C labeling: a 13Calpha direct detection experiment for mainchain resonance assignment, dihedral angle information, and amino acid type identification.

Authors:  Koh Takeuchi; Dominique P Frueh; Zhen-Yu J Sun; Sebastian Hiller; Gerhard Wagner
Journal:  J Biomol NMR       Date:  2010-04-10       Impact factor: 2.835

5.  Speeding up direct (15)N detection: hCaN 2D NMR experiment.

Authors:  Maayan Gal; Katherine A Edmonds; Alexander G Milbradt; Koh Takeuchi; Gerhard Wagner
Journal:  J Biomol NMR       Date:  2011-10-30       Impact factor: 2.835

6.  HNCA-TOCSY-CANH experiments with alternate (13)C- (12)C labeling: a set of 3D experiment with unique supra-sequential information for mainchain resonance assignment.

Authors:  Koh Takeuchi; Maayan Gal; Hideo Takahashi; Ichio Shimada; Gerhard Wagner
Journal:  J Biomol NMR       Date:  2010-11-26       Impact factor: 2.835

7.  Time-shared experiments for efficient assignment of triple-selectively labeled proteins.

Authors:  Frank Löhr; Aisha Laguerre; Christoph Bock; Sina Reckel; Peter J Connolly; Norzehan Abdul-Manan; Franz Tumulka; Rupert Abele; Jonathan M Moore; Volker Dötsch
Journal:  J Magn Reson       Date:  2014-09-30       Impact factor: 2.229

8.  A double TROSY hNCAnH experiment for efficient assignment of large and challenging proteins.

Authors:  Dominique P Frueh; Haribabu Arthanari; Alexander Koglin; Christopher T Walsh; Gerhard Wagner
Journal:  J Am Chem Soc       Date:  2009-09-16       Impact factor: 15.419

9.  Nitrogen-detected TROSY yields comparable sensitivity to proton-detected TROSY for non-deuterated, large proteins under physiological salt conditions.

Authors:  Koh Takeuchi; Haribabu Arthanari; Misaki Imai; Gerhard Wagner; Ichio Shimada
Journal:  J Biomol NMR       Date:  2016-01-22       Impact factor: 2.835

10.  Simultaneous cross polarization to (13)C and (15)N with (1)H detection at 60kHz MAS solid-state NMR.

Authors:  Bibhuti B Das; Stanley J Opella
Journal:  J Magn Reson       Date:  2015-12-12       Impact factor: 2.229

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