Literature DB >> 22911360

NMR View: A computer program for the visualization and analysis of NMR data.

B A Johnson1, R A Blevins.   

Abstract

NMR View is a computer program designed for the visualization and analysis of NMR data. It allows the user to interact with a practically unlimited number of 2D, 3D and 4D NMR data files. Any number of spectral windows can be displayed on the screen in any size and location. Automatic peak picking and facilitated peak analysis features are included to aid in the assignment of complex NMR spectra. NMR View provides structure analysis features and data transfer to and from structure generation programs, allowing for a tight coupling between spectral analysis and structure generation. Visual correlation between structures and spectra can be done with the Molecular Data Viewer, a molecular graphics program with bidirectional communication to NMR View. The user interface can be customized and a command language is provided to allow for the automation of various tasks.

Year:  1994        PMID： 22911360     DOI： 10.1007/BF00404272

Source DB:  PubMed          Journal:  J Biomol NMR        ISSN： 0925-2738            Impact factor:   2.835


  8 in total

1.  Solution structures of human transforming growth factor alpha derived from 1H NMR data.

Authors:  T P Kline; F K Brown; S C Brown; P W Jeffs; K D Kopple; L Mueller
Journal:  Biochemistry       Date:  1990-08-28       Impact factor: 3.162

2.  Efficient analysis of protein 2D NMR spectra using the software package EASY.

Authors:  C Eccles; P Güntert; M Billeter; K Wüthrich
Journal:  J Biomol NMR       Date:  1991-07       Impact factor: 2.835

3.  Efficient computation of three-dimensional protein structures in solution from nuclear magnetic resonance data using the program DIANA and the supporting programs CALIBA, HABAS and GLOMSA.

Authors:  P Güntert; W Braun; K Wüthrich
Journal:  J Mol Biol       Date:  1991-02-05       Impact factor: 5.469

4.  1H-NMR stereospecific assignments by conformational data-base searches.

Authors:  M Nilges; G M Clore; A M Gronenborn
Journal:  Biopolymers       Date:  1990 Mar-Apr       Impact factor: 2.505

5.  The Protein Data Bank: a computer-based archival file for macromolecular structures.

Authors:  F C Bernstein; T F Koetzle; G J Williams; E F Meyer; M D Brice; J R Rodgers; O Kennard; T Shimanouchi; M Tasumi
Journal:  J Mol Biol       Date:  1977-05-25       Impact factor: 5.469

6.  Protein carbon-13 spin systems by a single two-dimensional nuclear magnetic resonance experiment.

Authors:  B H Oh; W M Westler; P Darba; J L Markley
Journal:  Science       Date:  1988-05-13       Impact factor: 47.728

7.  Sequential assignment of the backbone nuclei (1H, 15N and 13C) of c-H-ras p21 (1-166).GDP using a novel 4D NMR strategy.

Authors:  S L Campbell-Burk; P J Domaille; M A Starovasnik; W Boucher; E D Laue
Journal:  J Biomol NMR       Date:  1992-11       Impact factor: 2.835

8.  Determination of the three-dimensional structure of iberiotoxin in solution by 1H nuclear magnetic resonance spectroscopy.

Authors:  B A Johnson; E E Sugg
Journal:  Biochemistry       Date:  1992-09-08       Impact factor: 3.162
  8 in total
  1296 in total

1.  Conformational ensembles: the role of neuropeptide structures in receptor binding.

Authors:  A S Edison; E Espinoza; C Zachariah
Journal:  J Neurosci       Date:  1999-08-01       Impact factor: 6.167

2.  Inhibitor binding induces active site stabilization of the HCV NS3 protein serine protease domain.

Authors:  G Barbato; D O Cicero; F Cordier; F Narjes; B Gerlach; S Sambucini; S Grzesiek; V G Matassa; R De Francesco; R Bazzo
Journal:  EMBO J       Date:  2000-03-15       Impact factor: 11.598

3.  Backbone NMR assignments of a high molecular weight protein (47 kDa), cyclic AMP receptor protein (apo-CRP)

Authors:  H S Won; T Yamazaki; T W Lee; J G Jee; M K Yoon; S H Park; T Otomo; H Aiba; Y Kyogoku; B J Lee
Journal:  J Biomol NMR       Date:  2000-01       Impact factor: 2.835

4.  Solution structure of the RNA polymerase subunit RPB5 from Methanobacterium thermoautotrophicum.

Authors:  A Yee; V Booth; A Dharamsi; A Engel; A M Edwards; C H Arrowsmith
Journal:  Proc Natl Acad Sci U S A       Date:  2000-06-06       Impact factor: 11.205

5.  Ansig for Windows: an interactive computer program for semiautomatic assignment of protein NMR spectra.

Authors:  M Helgstrand; P Kraulis; P Allard; T Härd
Journal:  J Biomol NMR       Date:  2000-12       Impact factor: 2.835

6.  Backbone resonance assignment of human UBC4.

Authors:  N A Farrow; S J Archer; Z J Wu; D M Camac; T Parsons; M Rolfe; P J Domaille
Journal:  J Biomol NMR       Date:  2000-12       Impact factor: 2.835

7.  Structural basis of SNT PTB domain interactions with distinct neurotrophic receptors.

Authors:  C Dhalluin; K S Yan; O Plotnikova; K W Lee; L Zeng; M Kuti; S Mujtaba; M P Goldfarb; M M Zhou
Journal:  Mol Cell       Date:  2000-10       Impact factor: 17.970

8.  StarDOM: from STAR format to XML.

Authors:  J P Linge; M Nilges; L Ehrlich
Journal:  J Biomol NMR       Date:  1999-10       Impact factor: 2.835

9.  Functional dynamics in the active site of the ribonuclease binase.

Authors:  L Wang; Y Pang; T Holder; J R Brender; A V Kurochkin; E R Zuiderweg
Journal:  Proc Natl Acad Sci U S A       Date:  2001-07-03       Impact factor: 11.205

10.  Probing the surface of a sweet protein: NMR study of MNEI with a paramagnetic probe.

Authors:  N Niccolai; R Spadaccini; M Scarselli; A Bernini; O Crescenzi; O Spiga; A Ciutti; D Di Maro; L Bracci; C Dalvit; P A Temussi
Journal:  Protein Sci       Date:  2001-08       Impact factor: 6.725
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