Literature DB >> 9171074

Eukaryotic release factor 1 (eRF1) abolishes readthrough and competes with suppressor tRNAs at all three termination codons in messenger RNA.

G Drugeon1, O Jean-Jean, L Frolova, X Le Goff, M Philippe, L Kisselev, A L Haenni.   

Abstract

It is known from experiments with bacteria and eukaryotic viruses that readthrough of termination codons located within the open reading frame (ORF) of mRNAs depends on the availability of suppressor tRNA(s) and the efficiency of termination in cells. Consequently, the yield of readthrough products can be used as a measure of the activity of polypeptide chain release factor(s) (RF), key components of the translation termination machinery. Readthrough of the UAG codon located at the end of the ORF encoding the coat protein of beet necrotic yellow vein furovirus is required for virus replication. Constructs harbouring this suppressible UAG codon and derivatives containing a UGA or UAA codon in place of the UAG codon have been used in translation experiments in vitro in the absence or presence of human suppressor tRNAs. Readthrough can be virtually abolished by addition of bacterially-expressed eukaryotic RF1 (eRF1). Thus, eRF1 is functional towards all three termination codons located in a natural mRNA and efficiently competes in vitro with endogenous and exogenous suppressor tRNA(s) at the ribosomal A site. These results are consistent with a crucial role of eRF1 in translation termination and forms the essence of an in vitro assay for RF activity based on the abolishment of readthrough by eRF1.

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Year:  1997        PMID: 9171074      PMCID: PMC146740          DOI: 10.1093/nar/25.12.2254

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  37 in total

1.  Single-step method of RNA isolation by acid guanidinium thiocyanate-phenol-chloroform extraction.

Authors:  P Chomczynski; N Sacchi
Journal:  Anal Biochem       Date:  1987-04       Impact factor: 3.365

2.  Mammalian release factor; in vitro assay and purification.

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Journal:  Methods Enzymol       Date:  1974       Impact factor: 1.600

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Authors:  J L Goldstein; A L Beaudet; C T Caskey
Journal:  Proc Natl Acad Sci U S A       Date:  1970-09       Impact factor: 11.205

4.  Leaky UAG termination codon in tobacco mosaic virus RNA.

Authors:  H R Pelham
Journal:  Nature       Date:  1978-03-30       Impact factor: 49.962

5.  Depletion in the levels of the release factor eRF1 causes a reduction in the efficiency of translation termination in yeast.

Authors:  I Stansfield; L Eurwilaichitr; M F Tuite
Journal:  Mol Microbiol       Date:  1996-06       Impact factor: 3.501

6.  Sequential translation of trinucleotide codons for the initiation and termination of protein synthesis.

Authors:  C T Caskey; R Tompkins; E Scolnick; T Caryk; M Nirenberg
Journal:  Science       Date:  1968-10-04       Impact factor: 47.728

7.  Nucleotide sequence of tobacco mosaic virus RNA.

Authors:  P Goelet; G P Lomonossoff; P J Butler; M E Akam; M J Gait; J Karn
Journal:  Proc Natl Acad Sci U S A       Date:  1982-10       Impact factor: 11.205

8.  Mammalian peptide chain termination. II. Codon specificity and GTPase activity of release factor.

Authors:  A L Beaudet; C T Caskey
Journal:  Proc Natl Acad Sci U S A       Date:  1971-03       Impact factor: 11.205

9.  DNA sequencing with chain-terminating inhibitors.

Authors:  F Sanger; S Nicklen; A R Coulson
Journal:  Proc Natl Acad Sci U S A       Date:  1977-12       Impact factor: 11.205

10.  Amber, ochre and opal suppressor tRNA genes derived from a human serine tRNA gene.

Authors:  J P Capone; P A Sharp; U L RajBhandary
Journal:  EMBO J       Date:  1985-01       Impact factor: 11.598

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  18 in total

Review 1.  Macromolecular mimicry.

Authors:  P Nissen; M Kjeldgaard; J Nyborg
Journal:  EMBO J       Date:  2000-02-15       Impact factor: 11.598

2.  Suppression of eukaryotic translation termination by selected RNAs.

Authors:  J Carnes; L Frolova; S Zinnen; G Drugeon; M Phillippe; J Justesen; A L Haenni; L Leinwand; L L Kisselev; M Yarus
Journal:  RNA       Date:  2000-10       Impact factor: 4.942

3.  Stop codon selection in eukaryotic translation termination: comparison of the discriminating potential between human and ciliate eRF1s.

Authors:  Laurent Chavatte; Stéphanie Kervestin; Alain Favre; Olivier Jean-Jean
Journal:  EMBO J       Date:  2003-04-01       Impact factor: 11.598

4.  Monitoring mis-acylated tRNA suppression efficiency in mammalian cells via EGFP fluorescence recovery.

Authors:  Erwin Ilegems; Horst M Pick; Horst Vogel
Journal:  Nucleic Acids Res       Date:  2002-12-01       Impact factor: 16.971

5.  Inhibition of translation termination mediated by an interaction of eukaryotic release factor 1 with a nascent peptidyl-tRNA.

Authors:  Deanna M Janzen; Lyudmila Frolova; Adam P Geballe
Journal:  Mol Cell Biol       Date:  2002-12       Impact factor: 4.272

6.  Antizyme frameshifting as a functional probe of eukaryotic translational termination.

Authors:  Zemfira N Karamysheva; Andrey L Karamyshev; Koichi Ito; Takashi Yokogawa; Kazuya Nishikawa; Yoshikazu Nakamura; Senya Matsufuji
Journal:  Nucleic Acids Res       Date:  2003-10-15       Impact factor: 16.971

7.  Overexpression of the SUP45 gene encoding a Sup35p-binding protein inhibits the induction of the de novo appearance of the [PSI+] prion.

Authors:  I L Derkatch; M E Bradley; S W Liebman
Journal:  Proc Natl Acad Sci U S A       Date:  1998-03-03       Impact factor: 11.205

8.  Stop codon recognition in ciliates: Euplotes release factor does not respond to reassigned UGA codon.

Authors:  S Kervestin; L Frolova; L Kisselev; O Jean-Jean
Journal:  EMBO Rep       Date:  2001-07-19       Impact factor: 8.807

9.  An expanded genetic code in Candida albicans to study protein-protein interactions in vivo.

Authors:  Silke Palzer; Yannick Bantel; Franziska Kazenwadel; Michael Berg; Steffen Rupp; Kai Sohn
Journal:  Eukaryot Cell       Date:  2013-03-29

10.  The effect of eukaryotic release factor depletion on translation termination in human cell lines.

Authors:  Deanna M Janzen; Adam P Geballe
Journal:  Nucleic Acids Res       Date:  2004-08-23       Impact factor: 16.971

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