Literature DB >> 12446775

Inhibition of translation termination mediated by an interaction of eukaryotic release factor 1 with a nascent peptidyl-tRNA.

Deanna M Janzen1, Lyudmila Frolova, Adam P Geballe.   

Abstract

Expression of the human cytomegalovirus UL4 gene is inhibited by translation of a 22-codon-upstream open reading frame (uORF2). The peptide product of uORF2 acts in a sequence-dependent manner to inhibit its own translation termination, resulting in persistence of the uORF2 peptidyl-tRNA linkage. Consequently, ribosomes stall at the uORF2 termination codon and obstruct downstream translation. Since termination appears to be the critical step affected by translation of uORF2, we examined the role of eukaryotic release factors 1 and 3 (eRF1 and eRF3) in the inhibitory mechanism. In support of the hypothesis that an interaction between eRF1 and uORF2 contributes to uORF2 inhibitory activity, specific residues in each protein, glycines 183 and 184 of the eRF1 GGQ motif and prolines 21 and 22 of the uORF2 peptide, were found to be necessary for full inhibition of downstream translation. Immunoblot analyses revealed that eRF1, but not eRF3, accumulated in the uORF2-stalled ribosome complex. Finally, increased puromycin sensitivity was observed after depletion of eRF1 from the stalled ribosome complex, consistent with inhibition of peptidyl-tRNA hydrolysis resulting from an eRF1-uORF2 peptidyl-tRNA interaction. These results reveal the paradoxical potential for interactions between a nascent peptide and eRF1 to obstruct the translation termination cascade.

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Year:  2002        PMID: 12446775      PMCID: PMC139875          DOI: 10.1128/MCB.22.24.8562-8570.2002

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  49 in total

1.  Regulated translation termination at the upstream open reading frame in s-adenosylmethionine decarboxylase mRNA.

Authors:  Alexa Raney; G Lynn Law; Gregory J Mize; David R Morris
Journal:  J Biol Chem       Date:  2001-12-12       Impact factor: 5.157

2.  Analysis of tryptophanase operon expression in vitro: accumulation of TnaC-peptidyl-tRNA in a release factor 2-depleted S-30 extract prevents Rho factor action, simulating induction.

Authors:  Feng Gong; Charles Yanofsky
Journal:  J Biol Chem       Date:  2002-03-05       Impact factor: 5.157

3.  The ribosomal exit tunnel functions as a discriminating gate.

Authors:  Hitoshi Nakatogawa; Koreaki Ito
Journal:  Cell       Date:  2002-03-08       Impact factor: 41.582

Review 4.  Modulation of translation termination mechanisms by cis- and trans-acting factors.

Authors:  D M Janzen; A P Geballe
Journal:  Cold Spring Harb Symp Quant Biol       Date:  2001

5.  Highly conserved NIKS tetrapeptide is functionally essential in eukaryotic translation termination factor eRF1.

Authors:  Ludmila Frolova; Alim Seit-Nebi; Lev Kisselev
Journal:  RNA       Date:  2002-02       Impact factor: 4.942

6.  Ribosome-bound EF-1 alpha-like protein of yeast Saccharomyces cerevisiae.

Authors:  S A Didichenko; M D Ter-Avanesyan; V N Smirnov
Journal:  Eur J Biochem       Date:  1991-06-15

7.  Polyamine regulation of ribosome pausing at the upstream open reading frame of S-adenosylmethionine decarboxylase.

Authors:  G L Law; A Raney; C Heusner; D R Morris
Journal:  J Biol Chem       Date:  2001-08-06       Impact factor: 5.157

8.  Proline residues at the C terminus of nascent chains induce SsrA tagging during translation termination.

Authors:  Christopher S Hayes; Baundauna Bose; Robert T Sauer
Journal:  J Biol Chem       Date:  2002-07-08       Impact factor: 5.157

9.  Identification of a human cDNA with high homology to yeast omnipotent suppressor 45.

Authors:  H E Grenett; P Bounelis; G M Fuller
Journal:  Gene       Date:  1992-01-15       Impact factor: 3.688

10.  Structure of the C-terminal end of the nascent peptide influences translation termination.

Authors:  A Björnsson; S Mottagui-Tabar; L A Isaksson
Journal:  EMBO J       Date:  1996-04-01       Impact factor: 11.598

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  34 in total

Review 1.  Termination of translation: interplay of mRNA, rRNAs and release factors?

Authors:  Lev Kisselev; Måns Ehrenberg; Ludmila Frolova
Journal:  EMBO J       Date:  2003-01-15       Impact factor: 11.598

2.  uORFs with unusual translational start codons autoregulate expression of eukaryotic ornithine decarboxylase homologs.

Authors:  Ivaylo P Ivanov; Gary Loughran; John F Atkins
Journal:  Proc Natl Acad Sci U S A       Date:  2008-07-14       Impact factor: 11.205

3.  Site-specific release of nascent chains from ribosomes at a sense codon.

Authors:  Victoria A Doronina; Cheng Wu; Pablo de Felipe; Matthew S Sachs; Martin D Ryan; Jeremy D Brown
Journal:  Mol Cell Biol       Date:  2008-05-05       Impact factor: 4.272

4.  Genetic identification of nascent peptides that induce ribosome stalling.

Authors:  Douglas R Tanner; Daniel A Cariello; Christopher J Woolstenhulme; Mark A Broadbent; Allen R Buskirk
Journal:  J Biol Chem       Date:  2009-10-19       Impact factor: 5.157

Review 5.  Tinkering with translation: protein synthesis in virus-infected cells.

Authors:  Derek Walsh; Michael B Mathews; Ian Mohr
Journal:  Cold Spring Harb Perspect Biol       Date:  2013-01-01       Impact factor: 10.005

6.  Arginine changes the conformation of the arginine attenuator peptide relative to the ribosome tunnel.

Authors:  Cheng Wu; Jiajie Wei; Pen-Jen Lin; Liwei Tu; Carol Deutsch; Arthur E Johnson; Matthew S Sachs
Journal:  J Mol Biol       Date:  2012-01-05       Impact factor: 5.469

Review 7.  Regulation of translation initiation in eukaryotes: mechanisms and biological targets.

Authors:  Nahum Sonenberg; Alan G Hinnebusch
Journal:  Cell       Date:  2009-02-20       Impact factor: 41.582

8.  The canonical UPF1-dependent nonsense-mediated mRNA decay is inhibited in transcripts carrying a short open reading frame independent of sequence context.

Authors:  Ana Luísa Silva; Francisco J C Pereira; Ana Morgado; Jian Kong; Rute Martins; Paula Faustino; Stephen A Liebhaber; Luísa Romão
Journal:  RNA       Date:  2006-10-31       Impact factor: 4.942

9.  The effect of eukaryotic release factor depletion on translation termination in human cell lines.

Authors:  Deanna M Janzen; Adam P Geballe
Journal:  Nucleic Acids Res       Date:  2004-08-23       Impact factor: 16.971

10.  Kinetics of paused ribosome recycling in Escherichia coli.

Authors:  Brian D Janssen; Christopher S Hayes
Journal:  J Mol Biol       Date:  2009-09-15       Impact factor: 5.469

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