Literature DB >> 8369461

Supramolecular ordering of DNA in the cholesteric liquid crystalline phase: an ultrastructural study.

A Leforestier1, F Livolant.   

Abstract

Aqueous solutions of 146-base pair DNA fragments form a cholesteric liquid crystalline phase in the range of about 160-290 mg/ml. We present a structural analysis of this phase by comparing the data obtained from polarizing and electron microscopy. This phase shows multiple aspects or "textures" which are presented and interpreted. They mainly depend on the orientation of the structure relative to the observation plane and on the nature, distribution, and amount of defects present in the phase. These defects are then analyzed with the two methods, and the molecular orientations can be defined precisely in their core. The biological interest of such structural analyses is discussed in relation with the understanding of chromatin structure and function.

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Year:  1993        PMID: 8369461      PMCID: PMC1225700          DOI: 10.1016/S0006-3495(93)81063-4

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  21 in total

1.  Liquid crystalline phases in concentrated aqueous solutions of Na+ DNA.

Authors:  R L Rill
Journal:  Proc Natl Acad Sci U S A       Date:  1986-01       Impact factor: 11.205

2.  Magnetic ordering of DNA liquid crystals.

Authors:  R Brandes; D R Kearns
Journal:  Biochemistry       Date:  1986-10-07       Impact factor: 3.162

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Authors:  L S Lerman
Journal:  Cold Spring Harb Symp Quant Biol       Date:  1974

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Authors:  Y Bouligand; M O Soyer; S Puiseux-Dao
Journal:  Chromosoma       Date:  1968       Impact factor: 4.316

5.  Replication of lambda dv plasmid in vitro promoted by purified lambda O and P proteins.

Authors:  T Tsurimoto; K Matsubara
Journal:  Proc Natl Acad Sci U S A       Date:  1982-12       Impact factor: 11.205

6.  Enzymatic replication of the origin of the Escherichia coli chromosome.

Authors:  R S Fuller; J M Kaguni; A Kornberg
Journal:  Proc Natl Acad Sci U S A       Date:  1981-12       Impact factor: 11.205

7.  Cholesteric organization of DNA in vivo and in vitro.

Authors:  F Livolant
Journal:  Eur J Cell Biol       Date:  1984-03       Impact factor: 4.492

8.  Macromolecular crowding increases binding of DNA polymerase to DNA: an adaptive effect.

Authors:  S B Zimmerman; B Harrison
Journal:  Proc Natl Acad Sci U S A       Date:  1987-04       Impact factor: 11.205

9.  Polymer-stimulated ligation: enhanced blunt- or cohesive-end ligation of DNA or deoxyribooligonucleotides by T4 DNA ligase in polymer solutions.

Authors:  B H Pheiffer; S B Zimmerman
Journal:  Nucleic Acids Res       Date:  1983-11-25       Impact factor: 16.971

10.  Organization of double-stranded DNA in bacteriophages: a study by cryo-electron microscopy of vitrified samples.

Authors:  J Lepault; J Dubochet; W Baschong; E Kellenberger
Journal:  EMBO J       Date:  1987-05       Impact factor: 11.598

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  19 in total

1.  Regulated phase transitions of bacterial chromatin: a non-enzymatic pathway for generic DNA protection.

Authors:  D Frenkiel-Krispin; S Levin-Zaidman; E Shimoni; S G Wolf; E J Wachtel; T Arad; S E Finkel; R Kolter; A Minsky
Journal:  EMBO J       Date:  2001-03-01       Impact factor: 11.598

2.  Dps protects cells against multiple stresses during stationary phase.

Authors:  Sudha Nair; Steven E Finkel
Journal:  J Bacteriol       Date:  2004-07       Impact factor: 3.490

3.  Birefringence and DNA condensation of liquid crystalline chromosomes.

Authors:  Man H Chow; Kosmo T H Yan; Michael J Bennett; Joseph T Y Wong
Journal:  Eukaryot Cell       Date:  2010-04-16

4.  Right-handed double-helix ultrashort DNA yields chiral nematic phases with both right- and left-handed director twist.

Authors:  Giuliano Zanchetta; Fabio Giavazzi; Michi Nakata; Marco Buscaglia; Roberto Cerbino; Noel A Clark; Tommaso Bellini
Journal:  Proc Natl Acad Sci U S A       Date:  2010-09-27       Impact factor: 11.205

5.  Lipoplexes of dicationic gemini surfactants with DNA: Structural features of DNA compaction and transfection efficiency.

Authors:  D A Faizullin; Yu F Zuev; L Ya Zakharova; A G Pokrovsky; V A Korobeinikov; T A Mukhametzyanov; A I Konovalov
Journal:  Dokl Biochem Biophys       Date:  2016-01-05       Impact factor: 0.788

6.  Bond orientational order, molecular motion, and free energy of high-density DNA mesophases.

Authors:  R Podgornik; H H Strey; K Gawrisch; D C Rau; A Rupprecht; V A Parsegian
Journal:  Proc Natl Acad Sci U S A       Date:  1996-04-30       Impact factor: 11.205

7.  Fine structure of the Deinococcus radiodurans nucleoid revealed by cryoelectron microscopy of vitreous sections.

Authors:  Mikhail Eltsov; Jacques Dubochet
Journal:  J Bacteriol       Date:  2005-12       Impact factor: 3.490

8.  Chromatin organization and radio resistance in the bacterium Gemmata obscuriglobus.

Authors:  Arnon Lieber; Andrew Leis; Ariel Kushmaro; Abraham Minsky; Ohad Medalia
Journal:  J Bacteriol       Date:  2008-12-12       Impact factor: 3.490

9.  Symmetry of electrostatic interaction between pyrophosphate DNA molecules.

Authors:  V L Golo; E I Kats; S A Kuznetsova; Yu S Volkov
Journal:  Eur Phys J E Soft Matter       Date:  2010-01-20       Impact factor: 1.890

10.  Polyamine structural effects on the induction and stabilization of liquid crystalline DNA: potential applications to DNA packaging, gene therapy and polyamine therapeutics.

Authors:  M Saminathan; Thresia Thomas; Akira Shirahata; C K S Pillai; T J Thomas
Journal:  Nucleic Acids Res       Date:  2002-09-01       Impact factor: 16.971

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