Literature DB >> 19074379

Chromatin organization and radio resistance in the bacterium Gemmata obscuriglobus.

Arnon Lieber1, Andrew Leis, Ariel Kushmaro, Abraham Minsky, Ohad Medalia.   

Abstract

The organization of chromatin has a major impact on cellular activities, such as gene expression. For bacteria, it was suggested that the spatial organization of the genetic material correlates with transcriptional levels, implying a specific architecture of the chromosome within the cytoplasm. Accordingly, recent technological advances have emphasized the organization of the genetic material within nucleoid structures. Gemmata obscuriglobus, a member of the phylum Planctomycetes, exhibits a distinctive nucleoid structure in which chromatin is encapsulated within a discrete membrane-bound compartment. Here, we show that this soil and freshwater bacterium tolerates high doses of UV and ionizing radiation. Cryoelectron tomography of frozen hydrated sections and electron microscopy of freeze-substituted cells have indicated a more highly ordered condensed-chromatin organization in actively dividing and stationary-phase G. obscuriglobus cells. These three-dimensional analyses revealed a complex network of double membranes that engulf the condensed DNA. Bioinformatics analysis has revealed the existence of a putative component involved in nonhomologous DNA end joining that presumably plays a role in maintaining chromatin integrity within the bacterium. Thus, our observations further support the notion that packed chromatin organization enhances radiation tolerance.

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Year:  2008        PMID: 19074379      PMCID: PMC2648202          DOI: 10.1128/JB.01513-08

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  58 in total

1.  The importance of repairing stalled replication forks.

Authors:  M M Cox; M F Goodman; K N Kreuzer; D J Sherratt; S J Sandler; K J Marians
Journal:  Nature       Date:  2000-03-02       Impact factor: 49.962

2.  Cryo-electron microscopy of vitreous sections of native biological cells and tissues.

Authors:  Ashraf Al-Amoudi; Lars P O Norlen; Jacques Dubochet
Journal:  J Struct Biol       Date:  2004-10       Impact factor: 2.867

3.  Mycobacterial Ku and ligase proteins constitute a two-component NHEJ repair machine.

Authors:  Marina Della; Phillip L Palmbos; Hui-Min Tseng; Louise M Tonkin; James M Daley; Leana M Topper; Robert S Pitcher; Alan E Tomkinson; Thomas E Wilson; Aidan J Doherty
Journal:  Science       Date:  2004-10-22       Impact factor: 47.728

4.  Radioresistance of Micrococcus radiodurans during the growth cycle.

Authors:  R W Serianni; A K Bruce
Journal:  Radiat Res       Date:  1968-11       Impact factor: 2.841

Review 5.  RecA protein: structure, function, and role in recombinational DNA repair.

Authors:  A I Roca; M M Cox
Journal:  Prog Nucleic Acid Res Mol Biol       Date:  1997

6.  Supramolecular ordering of DNA in the cholesteric liquid crystalline phase: an ultrastructural study.

Authors:  A Leforestier; F Livolant
Journal:  Biophys J       Date:  1993-07       Impact factor: 4.033

7.  Cell compartmentalisation in planctomycetes: novel types of structural organisation for the bacterial cell.

Authors:  M R Lindsay; R I Webb; M Strous; M S Jetten; M K Butler; R J Forde; J A Fuerst
Journal:  Arch Microbiol       Date:  2001-06       Impact factor: 2.552

8.  A five-nucleotide sequence protects DNA from exonucleolytic degradation by AddAB, the RecBCD analogue of Bacillus subtilis.

Authors:  F Chédin; P Noirot; V Biaudet; S D Ehrlich
Journal:  Mol Microbiol       Date:  1998-09       Impact factor: 3.501

9.  Heat, hydrogen peroxide, and UV resistance of Bacillus subtilis spores with increased core water content and with or without major DNA-binding proteins.

Authors:  D L Popham; S Sengupta; P Setlow
Journal:  Appl Environ Microbiol       Date:  1995-10       Impact factor: 4.792

10.  Characterization of Agrobacterium tumefaciens DNA ligases C and D.

Authors:  Hui Zhu; Stewart Shuman
Journal:  Nucleic Acids Res       Date:  2007-05-08       Impact factor: 16.971

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  18 in total

1.  Endocytosis-like protein uptake in the bacterium Gemmata obscuriglobus.

Authors:  Thierry G A Lonhienne; Evgeny Sagulenko; Richard I Webb; Kuo-Chang Lee; Josef Franke; Damien P Devos; Amanda Nouwens; Bernard J Carroll; John A Fuerst
Journal:  Proc Natl Acad Sci U S A       Date:  2010-06-21       Impact factor: 11.205

Review 2.  Recombinational DNA repair in a cellular context: a search for the homology search.

Authors:  Allon Weiner; Nathan Zauberman; Abraham Minsky
Journal:  Nat Rev Microbiol       Date:  2009-10       Impact factor: 60.633

3.  Spatially segregated transcription and translation in cells of the endomembrane-containing bacterium Gemmata obscuriglobus.

Authors:  Ekaterina Y Gottshall; Corrine Seebart; Jesse C Gatlin; Naomi L Ward
Journal:  Proc Natl Acad Sci U S A       Date:  2014-07-14       Impact factor: 11.205

Review 4.  Beyond the bacterium: planctomycetes challenge our concepts of microbial structure and function.

Authors:  John A Fuerst; Evgeny Sagulenko
Journal:  Nat Rev Microbiol       Date:  2011-06       Impact factor: 60.633

Review 5.  Advances in tomography: probing the molecular architecture of cells.

Authors:  Karen Fridman; Asaf Mader; Monika Zwerger; Natalie Elia; Ohad Medalia
Journal:  Nat Rev Mol Cell Biol       Date:  2012-10-10       Impact factor: 94.444

6.  Global and Targeted Lipid Analysis of Gemmata obscuriglobus Reveals the Presence of Lipopolysaccharide, a Signature of the Classical Gram-Negative Outer Membrane.

Authors:  Rajendra Mahat; Corrine Seebart; Franco Basile; Naomi L Ward
Journal:  J Bacteriol       Date:  2015-10-19       Impact factor: 3.490

7.  Uniting sex and eukaryote origins in an emerging oxygenic world.

Authors:  Jeferson Gross; Debashish Bhattacharya
Journal:  Biol Direct       Date:  2010-08-23       Impact factor: 4.540

8.  Draft genome sequence of Bacillus cereus strain LCT-BC244.

Authors:  Longxiang Su; Tao Zhou; Lisha Zhou; Xiangqun Fang; Tianzhi Li; Junfeng Wang; Yinghua Guo; De Chang; Yajuan Wang; Dongfang Li; Changting Liu
Journal:  J Bacteriol       Date:  2012-07       Impact factor: 3.490

Review 9.  Cryo-electron tomography of bacteria: progress, challenges and future prospects.

Authors:  Jacqueline L S Milne; Sriram Subramaniam
Journal:  Nat Rev Microbiol       Date:  2009-08-10       Impact factor: 60.633

10.  The compartmentalized bacteria of the planctomycetes-verrucomicrobia-chlamydiae superphylum have membrane coat-like proteins.

Authors:  Rachel Santarella-Mellwig; Josef Franke; Andreas Jaedicke; Mátyás Gorjánácz; Ulrike Bauer; Aidan Budd; Iain W Mattaj; Damien P Devos
Journal:  PLoS Biol       Date:  2010-01-19       Impact factor: 8.029

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