Literature DB >> 11230141

Regulated phase transitions of bacterial chromatin: a non-enzymatic pathway for generic DNA protection.

D Frenkiel-Krispin1, S Levin-Zaidman, E Shimoni, S G Wolf, E J Wachtel, T Arad, S E Finkel, R Kolter, A Minsky.   

Abstract

The enhanced stress resistance exhibited by starved bacteria represents a central facet of virulence, since nutrient depletion is regularly encountered by pathogens in their natural in vivo and ex vivo environments. Here we explore the notion that the regular stress responses, which are mediated by enzymatically catalyzed chemical transactions and promote endurance during the logarithmic growth phase, can no longer be effectively induced during starvation. We show that survival of bacteria in nutrient-depleted habitats is promoted by a novel strategy: finely tuned and fully reversible intracellular phase transitions. These non-enzymatic transactions, detected and studied in bacteria as well as in defined in vitro systems, result in DNA sequestration and generic protection within tightly packed and highly ordered assemblies. Since this physical mode of defense is uniquely independent of enzymatic activity or de novo protein synthesis, and consequently does not require energy consumption, it promotes virulence by enabling long-term bacterial endurance and enhancing antibiotic resistance in adverse habitats.

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Year:  2001        PMID: 11230141      PMCID: PMC145506          DOI: 10.1093/emboj/20.5.1184

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  39 in total

Review 1.  Protein oxidation and aging.

Authors:  E R Stadtman
Journal:  Science       Date:  1992-08-28       Impact factor: 47.728

Review 2.  Chromatins of low-protein content: special features of their compaction and condensation.

Authors:  E Kellenberger; B Arnold-Schulz-Gahmen
Journal:  FEMS Microbiol Lett       Date:  1992-12-15       Impact factor: 2.742

3.  Polyamine-induced compaction and aggregation of DNA--a major factor in radioprotection of chromatin under physiological conditions.

Authors:  G L Newton; J A Aguilera; J F Ward; R C Fahey
Journal:  Radiat Res       Date:  1996-06       Impact factor: 2.841

4.  The intracellular concentration of bound and unbound magnesium ions in Escherichia coli.

Authors:  C Hurwitz; C L Rosano
Journal:  J Biol Chem       Date:  1967-08-25       Impact factor: 5.157

Review 5.  Survival of hunger and stress: the role of rpoS in early stationary phase gene regulation in E. coli.

Authors:  R Hengge-Aronis
Journal:  Cell       Date:  1993-01-29       Impact factor: 41.582

Review 6.  The suicidal DNA repair methyltransferases of microbes.

Authors:  L Samson
Journal:  Mol Microbiol       Date:  1992-04       Impact factor: 3.501

7.  Synthesis of a Bacillus subtilis small, acid-soluble spore protein in Escherichia coli causes cell DNA to assume some characteristics of spore DNA.

Authors:  B Setlow; A R Hand; P Setlow
Journal:  J Bacteriol       Date:  1991-03       Impact factor: 3.490

Review 8.  (A)BC excinuclease: the Escherichia coli nucleotide excision repair enzyme.

Authors:  J J Lin; A Sancar
Journal:  Mol Microbiol       Date:  1992-08       Impact factor: 3.501

9.  Efficient protection against oxidative DNA damage in chromatin.

Authors:  M Ljungman; P C Hanawalt
Journal:  Mol Carcinog       Date:  1992       Impact factor: 4.784

10.  Lethal overproduction of the Escherichia coli nucleoid protein H-NS: ultramicroscopic and molecular autopsy.

Authors:  R Spurio; M Dürrenberger; M Falconi; A La Teana; C L Pon; C O Gualerzi
Journal:  Mol Gen Genet       Date:  1992-01
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  56 in total

1.  Localization of UvrA and effect of DNA damage on the chromosome of Bacillus subtilis.

Authors:  Bradley T Smith; Alan D Grossman; Graham C Walker
Journal:  J Bacteriol       Date:  2002-01       Impact factor: 3.490

2.  Structure of the DNA-SspC complex: implications for DNA packaging, protection, and repair in bacterial spores.

Authors:  Daphna Frenkiel-Krispin; Rinat Sack; Joseph Englander; Eyal Shimoni; Miriam Eisenstein; Esther Bullitt; Rachel Horowitz-Scherer; Christopher S Hayes; Peter Setlow; Abraham Minsky; Sharon Grayer Wolf
Journal:  J Bacteriol       Date:  2004-06       Impact factor: 3.490

3.  Dps protects cells against multiple stresses during stationary phase.

Authors:  Sudha Nair; Steven E Finkel
Journal:  J Bacteriol       Date:  2004-07       Impact factor: 3.490

4.  Birefringence and DNA condensation of liquid crystalline chromosomes.

Authors:  Man H Chow; Kosmo T H Yan; Michael J Bennett; Joseph T Y Wong
Journal:  Eukaryot Cell       Date:  2010-04-16

5.  DNA condensation and self-aggregation of Escherichia coli Dps are coupled phenomena related to the properties of the N-terminus.

Authors:  Pierpaolo Ceci; Sara Cellai; Elisabetta Falvo; Claudio Rivetti; Gian Luigi Rossi; Emilia Chiancone
Journal:  Nucleic Acids Res       Date:  2004-11-08       Impact factor: 16.971

6.  Order in stress - lessons from the inanimate world.

Authors:  Aashiq Hussain Kachroo
Journal:  J Biosci       Date:  2004-12       Impact factor: 1.826

7.  Modulating RssB activity: IraP, a novel regulator of sigma(S) stability in Escherichia coli.

Authors:  Alexandre Bougdour; Sue Wickner; Susan Gottesman
Journal:  Genes Dev       Date:  2006-04-01       Impact factor: 11.361

8.  The crystal structure of Deinococcus radiodurans Dps protein (DR2263) reveals the presence of a novel metal centre in the N terminus.

Authors:  Célia V Romão; Edward P Mitchell; Sean McSweeney
Journal:  J Biol Inorg Chem       Date:  2006-07-20       Impact factor: 3.358

9.  Ring-like nucleoids and DNA repair through error-free nonhomologous end joining in Deinococcus radiodurans.

Authors:  Abraham Minsky; Eyal Shimoni; Joseph Englander
Journal:  J Bacteriol       Date:  2006-09       Impact factor: 3.490

10.  Chromatin organization and radio resistance in the bacterium Gemmata obscuriglobus.

Authors:  Arnon Lieber; Andrew Leis; Ariel Kushmaro; Abraham Minsky; Ohad Medalia
Journal:  J Bacteriol       Date:  2008-12-12       Impact factor: 3.490

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