Literature DB >> 7433117

A computer program to search for tRNA genes.

R Staden.   

Abstract

This paper describes a computer program that can find tRNA genes within long DNA sequences. The program obviates the need to map the tRNA genes.

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Year:  1980        PMID: 7433117      PMCID: PMC327313     

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  12 in total

1.  A different genetic code in human mitochondria.

Authors:  B G Barrell; A T Bankier; J Drouin
Journal:  Nature       Date:  1979-11-08       Impact factor: 49.962

2.  Computer analysis of nucleic acid regulatory sequences.

Authors:  L J Korn; C L Queen; M N Wegman
Journal:  Proc Natl Acad Sci U S A       Date:  1977-10       Impact factor: 11.205

3.  Nucleotide sequence of a mutant eukaryotic gene: the yeast tyrosine-inserting ochre suppressor SUP4-o.

Authors:  H M Goodman; M V Olson; B D Hall
Journal:  Proc Natl Acad Sci U S A       Date:  1977-12       Impact factor: 11.205

4.  Structure of yeast phenylalanine-tRNA genes: an intervening DNA segment within the region coding for the tRNA.

Authors:  P Valenzuela; A Venegas; F Weinberg; R Bishop; W J Rutter
Journal:  Proc Natl Acad Sci U S A       Date:  1978-01       Impact factor: 11.205

5.  A strategy of DNA sequencing employing computer programs.

Authors:  R Staden
Journal:  Nucleic Acids Res       Date:  1979-06-11       Impact factor: 16.971

6.  Further procedures for sequence analysis by computer.

Authors:  R Staden
Journal:  Nucleic Acids Res       Date:  1978-03       Impact factor: 16.971

7.  Computer programs for the assembly of DNA sequences.

Authors:  T R Gingeras; J P Milazzo; D Sciaky; R J Roberts
Journal:  Nucleic Acids Res       Date:  1979-09-25       Impact factor: 16.971

8.  Sequence data handling by computer.

Authors:  R Staden
Journal:  Nucleic Acids Res       Date:  1977-11       Impact factor: 16.971

9.  Compilation of tRNA sequences.

Authors:  D H Gauss; F Grüter; M Sprinzl
Journal:  Nucleic Acids Res       Date:  1979-01       Impact factor: 16.971

10.  A precursor to a minor species of yeast tRNASer contains an intervening sequence.

Authors:  T Etcheverry; D Colby; C Guthrie
Journal:  Cell       Date:  1979-09       Impact factor: 41.582

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  47 in total

1.  Heterologous activation of the actinorhodin biosynthetic pathway in Streptomyces lividans.

Authors:  N M Romero; V Parro; F Malpartida; R P Mellado
Journal:  Nucleic Acids Res       Date:  1992-06-11       Impact factor: 16.971

2.  Nucleotide sequences of transfer RNA genes in the Pisum sativum chloroplast DNA.

Authors:  D R Shapiro; K K Tewari
Journal:  Plant Mol Biol       Date:  1986-01       Impact factor: 4.076

Review 3.  The Staden sequence analysis package.

Authors:  R Staden
Journal:  Mol Biotechnol       Date:  1996-06       Impact factor: 2.695

4.  tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence.

Authors:  T M Lowe; S R Eddy
Journal:  Nucleic Acids Res       Date:  1997-03-01       Impact factor: 16.971

5.  Automated sequence reading and analysis.

Authors:  J West
Journal:  Nucleic Acids Res       Date:  1988-03-11       Impact factor: 16.971

6.  A comprehensive package for DNA sequence analysis in FORTRAN IV for the PDP-11.

Authors:  J Arnold; V K Eckenrode; K Lemke; G J Phillips; S W Schaeffer
Journal:  Nucleic Acids Res       Date:  1986-01-10       Impact factor: 16.971

7.  The mitochondrial plasmid from Neurospora intermedia strain Labelle-1b contains a long open reading frame with blocks of amino acids characteristic of reverse transcriptases and related proteins.

Authors:  S Pande; E G Lemire; F E Nargang
Journal:  Nucleic Acids Res       Date:  1989-03-11       Impact factor: 16.971

8.  MBIS--an integrated system for the retrieval and analyses of sequence data from nucleic acids and proteins.

Authors:  C A Bucholtz; A H Reisner
Journal:  Nucleic Acids Res       Date:  1986-01-10       Impact factor: 16.971

9.  DNA sequence analysis: a procedure to find homologies among many sequences.

Authors:  G Krishnan; R K Kaul; P Jagadeeswaran
Journal:  Nucleic Acids Res       Date:  1986-01-10       Impact factor: 16.971

10.  Small tandemly repeated DNA sequences of higher plants likely originate from a tRNA gene ancestor.

Authors:  A A Benslimane; M Dron; C Hartmann; A Rode
Journal:  Nucleic Acids Res       Date:  1986-10-24       Impact factor: 16.971

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