Literature DB >> 2467254

The mitochondrial plasmid from Neurospora intermedia strain Labelle-1b contains a long open reading frame with blocks of amino acids characteristic of reverse transcriptases and related proteins.

S Pande1, E G Lemire, F E Nargang.   

Abstract

We have determined the DNA sequence of the 4070 base pair mitochondrial plasmid from the Labelle-1b strain of Neurospora intermedia. Analysis of the sequence revealed that the plasmid contains a long open reading frame (ORF) that could encode a protein of up to 1151 amino acids. Codon usage in the long ORF shows no clear relationship to Neurospora mitochondrial genes, nuclear genes, nor to the ORF of a different Neurospora mitochondrial plasmid. The long ORF contains regions of similarity to yeast mitochondrial RNA polymerase as well as blocks of amino acids that are characteristic of reverse transcriptases and the ORFs of certain group II mtDNA introns (Michel and Lang, (1985) Nature 316,641). The plasmid gives rise to specific transcripts, some of which may be unit length, and which carry the information for expression of the long ORF. The genetic organization and content of the plasmid suggest that it is related to mobile genetic elements.

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Year:  1989        PMID: 2467254      PMCID: PMC317540          DOI: 10.1093/nar/17.5.2023

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  65 in total

1.  Mitochondrial class II introns encode proteins related to the reverse transcriptases of retroviruses.

Authors:  F Michel; B F Lang
Journal:  Nature       Date:  1985 Aug 15-21       Impact factor: 49.962

2.  Identification of genes for reverse transcriptase-like enzymes in two Drosophila retrotransposons, 412 and gypsy; a rapid detection method of reverse transcriptase genes using YXDD box probes.

Authors:  S Yuki; S Ishimaru; S Inouye; K Saigo
Journal:  Nucleic Acids Res       Date:  1986-04-11       Impact factor: 16.971

3.  L1 family of repetitive DNA sequences in primates may be derived from a sequence encoding a reverse transcriptase-related protein.

Authors:  M Hattori; S Kuhara; O Takenaka; Y Sakaki
Journal:  Nature       Date:  1986 Jun 5-11       Impact factor: 49.962

4.  Homology between DNA polymerases of poxviruses, herpesviruses, and adenoviruses: nucleotide sequence of the vaccinia virus DNA polymerase gene.

Authors:  P L Earl; E V Jones; B Moss
Journal:  Proc Natl Acad Sci U S A       Date:  1986-06       Impact factor: 11.205

5.  Insertion of a foreign nucleotide sequence into mitochondrial DNA causes senescence in Neurospora intermedia.

Authors:  H Bertrand; B S Chan; A J Griffiths
Journal:  Cell       Date:  1985-07       Impact factor: 41.582

6.  Improved M13 phage cloning vectors and host strains: nucleotide sequences of the M13mp18 and pUC19 vectors.

Authors:  C Yanisch-Perron; J Vieira; J Messing
Journal:  Gene       Date:  1985       Impact factor: 3.688

7.  An evolutionary comparison of homologous mitochondrial plasmid DNAs from three Neurospora species.

Authors:  J W Taylor; B D Smolich; G May
Journal:  Mol Gen Genet       Date:  1985

8.  The mitochondrial URF1 gene in Neurospora crassa has an intron that contains a novel type of URF.

Authors:  G Burger; S Werner
Journal:  J Mol Biol       Date:  1985-11-20       Impact factor: 5.469

9.  The E35 stopper mutant of Neurospora crassa: precise localization of deletion endpoints in mitochondrial DNA and evidence that the deleted DNA codes for a subunit of NADH dehydrogenase.

Authors:  H de Vries; B Alzner-DeWeerd; C A Breitenberger; D D Chang; J C de Jonge; U L RajBhandary
Journal:  EMBO J       Date:  1986-04       Impact factor: 11.598

10.  Close structural resemblance between putative polymerase of a Drosophila transposable genetic element 17.6 and pol gene product of Moloney murine leukaemia virus.

Authors:  H Toh; R Kikuno; H Hayashida; T Miyata; W Kugimiya; S Inouye; S Yuki; K Saigo
Journal:  EMBO J       Date:  1985-05       Impact factor: 11.598

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  14 in total

1.  A redefinition of the Asp-Asp domain of reverse transcriptases.

Authors:  A M Velasco; L Medrano; A Lazcano; J Oró
Journal:  J Mol Evol       Date:  1992-12       Impact factor: 2.395

2.  Evidence that a 1.6 kilobase region of Neurospora mtDNA was derived by insertion of part of the LaBelle mitochondrial plasmid.

Authors:  F E Nargang; S Pande; J C Kennell; R A Akins; A M Lambowitz
Journal:  Nucleic Acids Res       Date:  1992-03-11       Impact factor: 16.971

3.  Characterization of circular mitochondrial plasmids in three Pythium species.

Authors:  F N Martin
Journal:  Curr Genet       Date:  1991-07       Impact factor: 3.886

Review 4.  Mitochondrial involvement in bladder function and dysfunction.

Authors:  C A Nevel-McGarvey; R M Levin; N Haugaard; X Wu; A P Hudson
Journal:  Mol Cell Biochem       Date:  1999-04       Impact factor: 3.396

Review 5.  Natural plasmids of filamentous fungi.

Authors:  A J Griffiths
Journal:  Microbiol Rev       Date:  1995-12

6.  A kalilo-like linear plasmid in Louisiana field isolates of the pseudohomothallic fungus Neurospora tetrasperma.

Authors:  M Marcinko-Kuehn; X Yang; F Debets; D J Jacobson; A J Griffiths
Journal:  Curr Genet       Date:  1994-10       Impact factor: 3.886

7.  Distribution of seven homology groups of mitochondrial plasmids in Neurospora: evidence for widespread mobility between species in nature.

Authors:  M T Arganoza; J Min; Z Hu; R A Akins
Journal:  Curr Genet       Date:  1994-07       Impact factor: 3.886

8.  Two Neurospora mitochondrial plasmids encode DNA polymerases containing motifs characteristic of family B DNA polymerases but lack the sequence Asp-Thr-Asp.

Authors:  Q Li; F E Nargang
Journal:  Proc Natl Acad Sci U S A       Date:  1993-05-01       Impact factor: 11.205

9.  Alteration of the cytochrome c oxidase subunit 2 gene in the [exn-5] mutant of Neurospora crassa.

Authors:  E G Lemire; J A Percy; J M Correia; B M Crowther; F E Nargang
Journal:  Curr Genet       Date:  1991-07       Impact factor: 3.886

10.  On the early emergence of reverse transcription: theoretical basis and experimental evidence.

Authors:  A Lazcano; V Valverde; G Hernández; P Gariglio; G E Fox; J Oró
Journal:  J Mol Evol       Date:  1992-12       Impact factor: 2.395

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