Literature DB >> 593900

Sequence data handling by computer.

R Staden.   

Abstract

The speed of the new DNA sequencing techniques has created a need for computer programs to handle the data produced. This paper describes simple programs designed specifically for use by people with little or no computer experience. The programs are for use on small computers and provide facilities for storage, editing and analysis of both DNA and amino acid sequences. A magnetic tape containing these programs is available on request.

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Year:  1977        PMID: 593900      PMCID: PMC343220          DOI: 10.1093/nar/4.11.4037

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  3 in total

1.  A rapid method for determining sequences in DNA by primed synthesis with DNA polymerase.

Authors:  F Sanger; A R Coulson
Journal:  J Mol Biol       Date:  1975-05-25       Impact factor: 5.469

2.  Nucleotide sequence of bacteriophage phi X174 DNA.

Authors:  F Sanger; G M Air; B G Barrell; N L Brown; A R Coulson; C A Fiddes; C A Hutchison; P M Slocombe; M Smith
Journal:  Nature       Date:  1977-02-24       Impact factor: 49.962

3.  A new method for sequencing DNA.

Authors:  A M Maxam; W Gilbert
Journal:  Proc Natl Acad Sci U S A       Date:  1977-02       Impact factor: 11.205

  3 in total
  167 in total

1.  Construction of bacterial plasmids that contain the nucleotide sequence for bovine corticotropin-beta-lipotropin precursor.

Authors:  S Nakanishi; A Inoue; T Kita; S Numa; A C Chang; S N Cohen; J Nunberg; R T Schimke
Journal:  Proc Natl Acad Sci U S A       Date:  1978-12       Impact factor: 11.205

2.  Nucleotide sequence of the osmoregulatory proU operon of Escherichia coli.

Authors:  J Gowrishankar
Journal:  J Bacteriol       Date:  1989-04       Impact factor: 3.490

3.  Polymerase-defective mutant of the Bryan high-titer strain of Rous sarcoma virus.

Authors:  M Sudol; T L Lerner; H Hanafusa
Journal:  Nucleic Acids Res       Date:  1986-03-11       Impact factor: 16.971

4.  Regions of the polyoma genome coding for T antigens.

Authors:  T Hunter; M A Hutchinson; W Eckhart; T Friedmann; A Esty; P LaPorte; P Deininger
Journal:  Nucleic Acids Res       Date:  1979-12-20       Impact factor: 16.971

5.  The alpha A-crystallin gene: conserved features of the 5'-flanking regions in human, mouse, and chicken.

Authors:  C J Jaworski; A B Chepelinsky; J Piatigorsky
Journal:  J Mol Evol       Date:  1991-12       Impact factor: 2.395

6.  Cloning and nucleotide sequences of the linear DNA killer plasmids from yeast.

Authors:  F Hishinuma; K Nakamura; K Hirai; R Nishizawa; N Gunge; T Maeda
Journal:  Nucleic Acids Res       Date:  1984-10-11       Impact factor: 16.971

7.  Isolation and characterization of a cDNA coding for human factor IX.

Authors:  K Kurachi; E W Davie
Journal:  Proc Natl Acad Sci U S A       Date:  1982-11       Impact factor: 11.205

8.  Evolution of influenza A and B viruses: conservation of structural features in the hemagglutinin genes.

Authors:  M Krystal; R M Elliott; E W Benz; J F Young; P Palese
Journal:  Proc Natl Acad Sci U S A       Date:  1982-08       Impact factor: 11.205

9.  Cloning of cDNA encoding the pre-beta subunit of mouse thyrotropin.

Authors:  J A Gurr; J F Catterall; I A Kourides
Journal:  Proc Natl Acad Sci U S A       Date:  1983-04       Impact factor: 11.205

10.  Sequence of the bacteriophage SP01 gene coding for transcription factor 1, a viral homologue of the bacterial type II DNA-binding proteins.

Authors:  J R Greene; S M Brennan; D J Andrew; C C Thompson; S H Richards; R L Heinrikson; E P Geiduschek
Journal:  Proc Natl Acad Sci U S A       Date:  1984-11       Impact factor: 11.205

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