Literature DB >> 3753788

DNA sequence analysis: a procedure to find homologies among many sequences.

G Krishnan, R K Kaul, P Jagadeeswaran.   

Abstract

SEQCMP, a program that analyzes and searches for homology among multiple nucleic acid sequences, is described. The sequences are compared by the dot matrix method and the consensus sequence is derived by superimposing all the dot matrices on one another. The program is written in MBASIC and runs on IBM-PC microcomputer. It is interactive and can be used by investigators with no computer background or experience.

Mesh：

Substances：

Year:  1986        PMID： 3753788      PMCID： PMC339439          DOI： 10.1093/nar/14.1.543

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN： 0305-1048            Impact factor:   16.971


  21 in total

1.  Analysis of large nucleic acid dot matrices on small computers.

Authors:  S E Zweig
Journal:  Nucleic Acids Res       Date:  1984-01-11       Impact factor: 16.971

2.  Improvements to a program for DNA analysis: a procedure to find homologies among many sequences.

Authors:  C Queen; M N Wegman; L J Korn
Journal:  Nucleic Acids Res       Date:  1982-01-11       Impact factor: 16.971

3.  Applications of parallel processing algorithms for DNA sequence analysis.

Authors:  J F Collins; A F Coulson
Journal:  Nucleic Acids Res       Date:  1984-01-11       Impact factor: 16.971

4.  Apple II software for M13 shotgun DNA sequencing.

Authors:  R Larson; J Messing
Journal:  Nucleic Acids Res       Date:  1982-01-11       Impact factor: 16.971

5.  Simplified computer programs for search of homology within nucleotide sequences.

Authors:  M Kröger; A Kröger-Block
Journal:  Nucleic Acids Res       Date:  1984-01-11       Impact factor: 16.971

6.  A DNA analysis program designed for computer novices working in an industrial-research environment.

Authors:  T W Stone; K N Potter
Journal:  Nucleic Acids Res       Date:  1984-01-11       Impact factor: 16.971

7.  Characterization of the complementary deoxyribonucleic acid and gene coding for human prothrombin.

Authors:  S J Degen; R T MacGillivray; E W Davie
Journal:  Biochemistry       Date:  1983-04-26       Impact factor: 3.162

8.  Use of statistical criteria for screening potential homologies in nucleic acid sequences.

Authors:  M Kanehisa
Journal:  Nucleic Acids Res       Date:  1984-01-11       Impact factor: 16.971

9.  Matrix program to analyze primary structure homology.

Authors:  J Novotny
Journal:  Nucleic Acids Res       Date:  1982-01-11       Impact factor: 16.971

10.  Enhanced graphic matrix analysis of nucleic acid and protein sequences.

Authors:  J V Maizel; R P Lenk
Journal:  Proc Natl Acad Sci U S A       Date:  1981-12       Impact factor: 11.205
View more
  3 in total

1.  A survey of multiple sequence comparison methods.

Authors:  S C Chan; A K Wong; D K Chiu
Journal:  Bull Math Biol       Date:  1992-07       Impact factor: 1.758

2.  A multiple sequence comparison method.

Authors:  A K Wong; S C Chan; D K Chiu
Journal:  Bull Math Biol       Date:  1993-03       Impact factor: 1.758

3.  Discovering active motifs in sets of related protein sequences and using them for classification.

Authors:  J T Wang; T G Marr; D Shasha; B A Shapiro; G W Chirn
Journal:  Nucleic Acids Res       Date:  1994-07-25       Impact factor: 16.971
  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.