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Literature DB >> 461197

A strategy of DNA sequencing employing computer programs.

Abstract

With modern fast sequencing techniques and suitable computer programs it is now possible to sequence whole genomes without the need of restriction maps. This paper describes computer programs that can be used to order both sequence gel readings and clones. A method of coding for uncertainties in gel readings is described. These programs are available on request.

Mesh：

Substances：

Year: 1979 PMID： 461197 PMCID： PMC327874 DOI： 10.1093/nar/6.7.2601

Source DB: PubMed Journal: Nucleic Acids Res ISSN： 0305-1048 Impact factor: 16.971

8 in total

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Authors: F Sanger; A R Coulson
Journal: J Mol Biol Date: 1975-05-25 Impact factor: 5.469

2. Nucleotide sequence of bacteriophage phi X174 DNA.

Authors: F Sanger; G M Air; B G Barrell; N L Brown; A R Coulson; C A Fiddes; C A Hutchison; P M Slocombe; M Smith
Journal: Nature Date: 1977-02-24 Impact factor: 49.962

3. A new method for sequencing DNA.

Authors: A M Maxam; W Gilbert
Journal: Proc Natl Acad Sci U S A Date: 1977-02 Impact factor: 11.205

4. Nucleotide sequence of bacteriophage G4 DNA.

Authors: G N Godson; B G Barrell; R Staden; J C Fiddes
Journal: Nature Date: 1978-11-16 Impact factor: 49.962

5. Further procedures for sequence analysis by computer.

Authors: R Staden
Journal: Nucleic Acids Res Date: 1978-03 Impact factor: 16.971

6. The use of thin acrylamide gels for DNA sequencing.

Authors: F Sanger; A R Coulson
Journal: FEBS Lett Date: 1978-03-01 Impact factor: 4.124

7. Sequence data handling by computer.

Authors: R Staden
Journal: Nucleic Acids Res Date: 1977-11 Impact factor: 16.971

8. DNA sequencing with chain-terminating inhibitors.

Authors: F Sanger; S Nicklen; A R Coulson
Journal: Proc Natl Acad Sci U S A Date: 1977-12 Impact factor: 11.205

8 in total

117 in total

1. Selective mapping: a strategy for optimizing the construction of high-density linkage maps.

Authors: T J Vision; D G Brown; D B Shmoys; R T Durrett; S D Tanksley
Journal: Genetics Date: 2000-05 Impact factor: 4.562

2. New Generations: Sequencing Machines and Their Computational Challenges.

Authors: David C Schwartz; Michael S Waterman
Journal: J Comput Sci Technol Date: 2010-01-01 Impact factor: 1.571

3. Metagenomic Classification Using an Abstraction Augmented Markov Model.

Authors: Xiujun Sylvia Zhu; Monnie McGee
Journal: J Comput Biol Date: 2015-11-30 Impact factor: 1.479

4. Nucleotide sequence of the FNR-regulated fumarase gene (fumB) of Escherichia coli K-12.

Authors: P J Bell; S C Andrews; M N Sivak; J R Guest
Journal: J Bacteriol Date: 1989-06 Impact factor: 3.490

5. The Bermuda Triangle: The Pragmatics, Policies, and Principles for Data Sharing in the History of the Human Genome Project.

Authors: Kathryn Maxson Jones; Rachel A Ankeny; Robert Cook-Deegan
Journal: J Hist Biol Date: 2018-12 Impact factor: 1.326