| Literature DB >> 32698483 |
Abstract
The second-order Møller-Plesset perturbation theory calculations with the aug-cc-pVTZ basis set were performed for complexes of molecular hydrogen. These complexes are connected by various types of interactions, the hydrogen bonds and halogen bonds are most often represented in the sample of species analysed; most interactions can be classified as σ-hole and π-hole bonds. Different theoretical approaches were applied to describe these interactions: Quantum Theory of 'Atoms in Molecules', Natural Bond Orbital method, or the decomposition of the energy of interaction. The energetic, geometrical, and topological parameters are analysed and spectroscopic properties are discussed. The stretching frequency of the H-H bond of molecular hydrogen involved in intermolecular interactions is considered as a parameter expressing the strength of interaction.Entities:
Keywords: dihydrogen stretching mode; hydrogen bond; molecular hydrogen; π-hole bond; σ-hole bond
Mesh:
Substances:
Year: 2020 PMID: 32698483 PMCID: PMC7397284 DOI: 10.3390/molecules25143294
Source DB: PubMed Journal: Molecules ISSN: 1420-3049 Impact factor: 4.411
Figure 1The molecular graphs of selected complexes analysed here; big circles correspond to attractors, small green circles to bond critical points, and continuous and broken lines to bond paths.
The energetic characteristics of complexes analysed (in kcal/mol), the interaction and binding energy corrected for basis set superposition error (BSSE) (Eint and Ebin, respectively), the deformation energy (Edef), and the BSSE; the type of interaction is also indicated (Bond). The results of MP2/aug-c-pVTZ calculations, i.e., second-order Møller–Plesset perturbation theory (MP2) with the aug-cc-pVTZ basis set are presented, the same level calculations are shown in other tables.
| Lewis Acid | Bond | Eint | Ebin | Edef | BSSE |
|---|---|---|---|---|---|
| AlF3 | Triel | −4.78 | −4.02 | 0.76 | 0.71 |
| AlH3 | Triel | −2.80 | −2.58 | 0.22 | 0.19 |
| BF3 | Triel | −0.67 | −0.66 | 0.01 | 0.39 |
| BH3 | Triel | −12.62 | −5.39 | 7.23 | 0.53 |
| BeF2 | Beryllium | −1.17 | −0.96 | 0.21 | 0.28 |
| BeH2 | Beryllium | −0.48 | −0.46 | 0.02 | 0.06 |
| MgF2 | Magnesium | −3.57 | −3.28 | 0.29 | 0.30 |
| MgH2 | Magnesium | −1.15 | −1.07 | 0.08 | 0.07 |
| Li+ | Lithium | −5.84 | −5.81 | 0.03 | 0.04 |
| HCCH | Hydrogen | −0.30 | −0.30 | 0.00 | 0.12 |
| HF | Hydrogen | −0.94 | −0.94 | 0.00 | 0.18 |
| HCN | Hydrogen | −0.45 | −0.45 | 0.00 | 0.17 |
| NH4+ | Hydrogen | −2.44 | −2.42 | 0.02 | 0.15 |
| H3O+ | Hydrogen | −5.53 | −5.29 | 0.24 | 0.25 |
| SiF4 | Tetrel | −0.41 | −0.41 | 0.00 | 0.38 |
| SiFH3 | Tetrel | −0.57 | −0.57 | 0.00 | 0.22 |
| PFH2 | Pnicogen | −0.92 | −0.91 | 0.01 | 0.30 |
| P(CN)H2 | Pnicogen | −0.54 | −0.54 | 0.00 | 0.16 |
| S(CN)2 | Chalcogen | −0.87 | −0.87 | 0.00 | 0.19 |
| SF2 | Chalcogen | −0.60 | −0.60 | 0.00 | 0.21 |
| Cl2 | Halogen | −0.52 | −0.52 | 0.00 | 0.15 |
| HCCCl | Halogen | −0.37 | −0.37 | 0.00 | 0.1 |
| (NC)CCCl | Halogen | −0.46 | −0.46 | 0.00 | 0.13 |
| NCCl | Halogen | −0.46 | −0.46 | 0.00 | 0.11 |
| CF3Cl | Halogen | −0.32 | −0.32 | 0.00 | 0.12 |
The characteristics of complexes analysed, r(H2)—the H-H bond length (Å), νHH—H-H bond stretching frequency (in cm−1), IHH—intensity of the H-H stretching mode (km mol−1), q(H2)—the charge of dihydrogen in the complex (in au), and ENBO—the energy of the most important orbital–orbital interaction in the complex considered (in kcal/mol). *
| Lewis Acid | r(H2) | νHH | IHH | q(H2) | ENBO |
|---|---|---|---|---|---|
| AlF3 | 0.748 | 4370.2 | 34.42 | 0.096 | 20.0 |
| AlH3 | 0.747 | 4374.2 | 21.19 | 0.068 | 21.5 |
| BF3 | 0.739 | 4497.46 | 1.95 | 0.01 | 1.1 |
| BH3 | 0.799 | 3630.8 | 19.69 | 0.217 | 282.1 |
| BeF2 | 0.741 | 4469.32 | 4.13 | 0.022 | 3.8 |
| BeH2 | 0.739 | 4491.49 | 2.17 | −0.269 | 1.4 |
| MgF2 | 0.746 | 4396.43 | 11.52 | 0.056 | 11.1 |
| MgH2 | 0.742 | 4448.55 | 6.2 | 0.024 | 4.5 |
| Li+ | 0.746 | 4394.79 | 43.41 | 0.07 | 4.8 |
| HCCH | 0.738 | 4508 | 1.06 | 0 | 0.4 |
| HF | 0.74 | 4482.4 | 4.11 | 0.046 | 1.3 |
| HCN | 0.738 | 4503 | 2.8 | 0.017 | 0.7 |
| NH4+ | 0.742 | 4446.8 | 32.61 | 0.062 | 4 |
| H3O+ | 0.748 | 4372.3 | 45.12 | 0.138 | 16.9 |
| SiF4 | 0.738 | 4505.2 | 0.45 | 0.003 | 0.1 |
| SiFH3 | 0.739 | 4497.3 | 1.16 | −0.005 | 0.7 |
| PFH2 | 0.74 | 4474.5 | 1.07 | 0.001 | 0.2 |
| P(CN)H2 | 0.739 | 4497.6 | 1.5 | 0.015 | 0.5 |
| S(CN)2 | 0.739 | 4489.2 | 1.8 | 0.024 | 0.4 |
| SF2 | 0.739 | 4495.2 | 1.83 | 0.019 | 0.5 |
| Cl2 | 0.739 | 4499.6 | 2.47 | 0.034 | 0.5 |
| HCCCl | 0.738 | 4507.9 | 0.71 | 0.016 | 0.2 |
| (NC)CCCl | 0.738 | 4505 | 2.15 | 0.019 | 0.2 |
| NCCl | 0.738 | 4505 | 1.78 | 0.028 | 0.2 |
| CF3Cl | 0.738 | 4508.9 | 0.69 | 0.024 | 0.2 |
* characteristics of the isolated dihydrogen calculated at the same level as complexes collected; H2 stretching frequency νHH0 = 4517.6 cm−1, H-H bond length r0(H2) = 0.737 Å.
Figure 2The linear correlation between the H-H bond length (Å) and the corresponding H-H bond stretching frequency (cm−1).
Figure 3The molecular graph of the BeH2···H2 complex; big circles correspond to attractors, small green circles to bond critical points, small red circle to the ring critical point, and continuous and broken lines to bond paths.
The spectroscopic characteristics of the proton-donating bond in hydrogen bonded systems; the A-H bond stretching frequency (cm−1)—νAH, with the corresponding stretching mode intensity (km mol−1)—IAH, and the A-H bond length rAH (in Å); these values for the AH bond not involved in H-bond interaction are given in parentheses, —the percentage increase of the AH bond length that results from complexation (Equation (1)).
| L. Acid | νAH | IAH | rAH | AHinc% |
|---|---|---|---|---|
| HCCH | 3430.7 | 118.24 | 1.062 | 0 |
| HF | 4085.9 | 252.44 | 0.923 | 0.11 |
| HCN | 3466.2 | 117.44 | 1.065 | 0.09 |
| NH4+ | 3476.2 | 310.1 | 1.026 | 0.39 |
| H3O+ | 3253.7 | 1066.52 | 0.998 | 1.84 |
Figure 4The linear correlation between the H-H bond stretching frequency (cm−1) and the corresponding percentage increase of the A-H bond length.
The topological characteristics of the intermolecular bond critical point, BCP, (in au); ρBCP—the electron density at BCP, ▽2ρBCP—the Laplacian of this electron density, and HBCP—the corresponding total electron energy density at BCP.
| Lewis Acid |
| ▽2 | HBCP |
|---|---|---|---|
| AlF3 | 0.019 | 0.084 | 0.001 |
| AlH3 | 0.015 | 0.050 | 0 |
| BH3 | 0.086 | 0.073 | −0.061 |
| MgF2 | 0.012 | 0.070 | 0.003 |
| Li+ | 0.013 | 0.072 | 0.004 |
| NH4+ | 0.014 | 0.038 | 0 |
| H3O+ | 0.031 | 0.048 | −0.006 |
Figure 5The exponential relationship between the H2 charge (au) and the electron density at the intermolecular BCP (au); the greater scatter plot concerns the whole sample, while the smaller one concerns the sub-set of strong interactions.
The energy terms for selected complexes resulting from the decomposition of the energy of interaction (in kcal/mol); ΔEPauli—the Pauli repulsion, ΔEelstat—the electrostatic term, ΔEorb—the orbital interaction energy, ΔEdisp—the dispersion interaction energy term, and ΔEint—the total interaction energy.
| Lewis Acid | ΔEPauli | ΔEelstat | ΔEorb | ΔEdisp | ΔEint |
|---|---|---|---|---|---|
| AlF3 | 15.04 | −8.19 | −10.98 | −1.24 | −5.37 |
| AlH3 | 11.54 | −6.25 | −8.04 | −0.72 | −3.47 |
| BH3 | 83.58 | −33.84 | −66.13 | −1.35 | −17.74 |
| MgF2 | 7.66 | −5.53 | −5.11 | −1.5 | −4.48 |
| Li+ | 3.39 | −2.69 | −6.31 | −2.96 | −8.57 |
| NH4+ | 3.11 | −1.7 | −3.85 | −0.94 | −3.38 |
| H3O+ | 8.01 | −3.52 | −11.21 | −0.69 | −7.41 |