| Literature DB >> 30577501 |
Ming-Chang Hou1, Shu-Bin Yang2, Qing-Zhong Li3, Jian-Bo Cheng4, Hai-Bei Li5, Shu-Feng Liu6.
Abstract
Carbon bonding is a weak interaction, particularly when a neutral molecule acts as an electron donor. Thus, there is an interesting question of how to enhance carbon bonding. In this paper, we found that the ⁻OCH₃ group at the exocyclic carbon of fulvene can form a moderate carbon bond with NH₃ with an interaction energy of about -10 kJ/mol. The ⁻OSiH₃ group engages in a stronger tetrel bond than does the ⁻OGeH₃ group, while a reverse result is found for both ⁻OSiF₃ and ⁻OGeF₃ groups. The abnormal order in the former is mainly due to the stronger orbital interaction in the ⁻OSiH₃ complex, which has a larger deformation energy. The cyano groups adjoined to the fulvene ring not only cause a change in the interaction type, from vdW interactions in the unsubstituted system of ⁻OCF₃ to carbon bonding, but also greatly strengthen tetrel bonding. The formation of tetrel bonding has an enhancing effect on the aromaticity of the fulvene ring.Entities:
Keywords: aromaticity; fulvene; substituents; tetrel bonding
Mesh:
Substances:
Year: 2018 PMID: 30577501 PMCID: PMC6337681 DOI: 10.3390/molecules24010010
Source DB: PubMed Journal: Molecules ISSN: 1420-3049 Impact factor: 4.411
Figure 1MEP maps of 6-OTX3-fulvene on the 0.001 electrons bohr−3 isosurface. Color ranges, in au, are: red, >0.03; yellow, 0.03–0.02; green, 0.02–0.00; blue, <0.
Interaction energy (Eint, kJ/mol), binding energy (Eb, kJ/mol), deformation energy (DE, kJ/mol), intermolecular distance (R, Å), ∠O–T···N (θ, deg), change of O–T bond length (∆r, Å), and the MEP maximum (Vmax, a.u.) of the σ-hole at the O–T bond end.
| Eint | Eb | DE | R | θ | ∆ |
| |
|---|---|---|---|---|---|---|---|
| 6-OTX3-fulvene···NH3 | |||||||
| –CH3 | −9.93 | −9.90 | 0.02 | 3.228 | 178.3 | 0.006 | 0.040 |
| –SiH3 | −50.13 | −30.07 | 20.39 | 2.353 | 178.0 | 0.051 | 0.074 |
| –GeH3 | −39.30 | −29.73 | 9.56 | 2.565 | 180.0 | 0.044 | 0.084 |
| –CF3 | −4.12 | −3.97 | 0.15 | 3.498 | 169.3 | 0.003 | 0.039 |
| –SiF3 | −137.07 | −38.04 | 99.03 | 2.052 | 176.9 | 0.063 | 0.095 |
| –GeF3 | −151.31 | −70.36 | 80.94 | 2.074 | 176.7 | 0.046 | 0.113 |
| HOTX3···NH3 | |||||||
| –CH3 | −4.76 | −4.70 | 0.06 | 3.384 | 174.9 | 0.003 | 0.019 |
| –SiH3 | −18.24 | −14.89 | 3.35 | 2.792 | 175.9 | 0.017 | 0.051 |
| –GeH3 | −18.13 | −15.89 | 2.24 | 2.872 | 175.5 | 0.018 | 0.059 |
| –CF3 | −3.55 | −3.42 | 0.12 | 3.620 | 166.6 | 0.000 | 0.029 |
| –SiF3 | −101.03 | −14.96 | 86.07 | 2.120 | 176.2 | 0.041 | 0.078 |
| –GeF3 | −126.75 | −49.49 | 77.27 | 2.102 | 176.0 | 0.032 | 0.097 |
| PhOTX3···NH3 | |||||||
| –CH3 | −7.55 | −7.43 | 0.12 | 3.302 | 176.0 | 0.004 | 0.028 |
| –SiH3 | −30.78 | −20.56 | 10.22 | 2.539 | 177.6 | 0.032 | 0.057 |
| –GeH3 | −27.44 | −21.96 | 5.48 | 2.697 | 178.1 | 0.030 | 0.067 |
| –CF3 | −3.66 | −3.57 | 0.09 | 3.634 | 166.6 | 0.000 | 0.024 |
| –SiF3 | −115.29 | −22.83 | 92.46 | 2.088 | 176.9 | 0.050 | 0.080 |
| –GeF3 | −134.93 | −−56.92 | 79.17 | 2.094 | 175.8 | 0.038 | 0.096 |
Figure 2Optimized structures of the 6-OTX3-fulvene···NH3 complexes.
Figure 3AIM diagrams before and after tetracyano substitution of 6-OTF3-fulvene···NH3 (T = C and Si). The units of distance and Eint are Å and kJ/mol, respectively.
Electron density (ρ, a.u.), Laplacian (∇2ρ, a.u.), and total energy density (H, a.u.) at the intermolecular BCP.
| ρ | ∇2ρ |
| |
|---|---|---|---|
|
| 0.006 | 0.026 | 0.002 |
|
| 0.033 | 0.079 | −0.008 |
|
| 0.027 | 0.082 | −0.008 |
|
| 0.004 | 0.019 | 0.001 |
|
| 0.063 | 0.251 | −0.020 |
|
| 0.083 | 0.230 | −0.033 |
Charge transfer (CT, e) and second-order perturbation energies (E(2), kJ/mol) in the complexes.
| CT | Orbitals |
| Orbitals |
| |
|---|---|---|---|---|---|
|
| 0.003 | Lp(N)→σ*C-O | 5.23 | ||
|
| 0.093 | Lp(N)→ | 186.72 | Lp(N)→σ*Si-H | 60.69 |
|
| 0.062 | Lp(N)→ | 129.91 | Lp(N)→σ*Ge-H | 34.44 |
|
| −0.002 | Lp(F)→σ*N-H | 0.67 | ||
|
| 0.163 | Lp(N)→σ*Si-O | 102.66 | Lp(N)→σ*Si-F | 296.53 |
|
| 0.186 | Lp(N)→σ*Ge-O | 134.76 | Lp(N)→σ*Ge-F | 401.61 |
Note: CT is the sum of the charge on all atoms of NH3.
Figure 4Plots of deformation densities of the pair-wise orbital interactions (Δρ) in 6-OTX3-fulvene···NH3 (T = Si, Ge; X = H, F) at the PBED3/TZ2P//MP2/aug-cc-pVTZ level. The associated orbital interaction energies are given in kJ/mol. The color code of the charge flow is red→blue, and the isovalue for Δρ(r) is 0.002 a.u.
Figure 5Dependence of three attractive energies on the TX3 group (T = C, Si, and Ge; X = H and F).
NICS(1)zz in 6-OTX3-fulvene···NH3 and 6-OTX3-fulvene (in parentheses), as well as their difference (Δ); all are in ppm.
| NICS(1)zz | Δ | |
|---|---|---|
|
| −6.0781 (−5.8122) | −0.2659 |
|
| −6.7149 (−5.7074) | −1.0125 |
|
| −6.9462 (−6.0684) | −0.8778 |
|
| −5.2846 (−4.7814) | −0.5032 |
|
| −6.0377 (−5.7074) | −0.3303 |
|
| −6.2645 (−4.9984) | −1.2661 |