Literature DB >> 2986127

Primary structure and gene organization of human hepatitis A virus.

R Najarian, D Caput, W Gee, S J Potter, A Renard, J Merryweather, G Van Nest, D Dina.   

Abstract

The RNA genome of human hepatitis A virus (HAV) was molecularly cloned. Recombinant DNA clones representing the entire HAV RNA were used to determine the primary structure of the viral genome. The length of the viral genome is 7478 nucleotides. An open reading frame starting at nucleotide 734 and terminating at nucleotide 7415 encodes a polyprotein of Mr 251,940. Comparison of the HAV nucleotide sequence with that of other picornaviruses has failed to reveal detectable areas of homology. However, a computer analysis of the putative amino acid sequence of HAV and poliovirus demonstrated the existence of short areas of homology in virion protein 3 (VP3) and throughout the carboxyl-terminal portion of the polyproteins. In addition, extensive protein structural homologies with poliovirus were detected.

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Year:  1985        PMID: 2986127      PMCID: PMC397617          DOI: 10.1073/pnas.82.9.2627

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  25 in total

1.  Propagation of human hepatitis A virus in cell culture in vitro.

Authors:  P J Provost; M R Hilleman
Journal:  Proc Soc Exp Biol Med       Date:  1979-02

2.  The location of the polio genome protein in viral RNAs and its implication for RNA synthesis.

Authors:  A Nomoto; B Detjen; R Pozzatti; E Wimmer
Journal:  Nature       Date:  1977-07-21       Impact factor: 49.962

3.  Characterization and classification of virus particles associated with hepatitis A. II. Type and configuration of nucleic acid.

Authors:  G Siegl; G G Frösner
Journal:  J Virol       Date:  1978-04       Impact factor: 5.103

4.  The polypeptides of hepatitis A virus.

Authors:  A G Coulepis; S A Locarnini; A A Ferris; N I Lehmann; I D Gust
Journal:  Intervirology       Date:  1978       Impact factor: 1.763

5.  Conformational parameters for amino acids in helical, beta-sheet, and random coil regions calculated from proteins.

Authors:  P Y Chou; G D Fasman
Journal:  Biochemistry       Date:  1974-01-15       Impact factor: 3.162

6.  Prediction of protein conformation.

Authors:  P Y Chou; G D Fasman
Journal:  Biochemistry       Date:  1974-01-15       Impact factor: 3.162

7.  Propagation of human hepatitis A virus in a hepatoma cell line.

Authors:  G G Frösner; F Deinhardt; R Scheid; V Gauss-Müller; N Holmes; V Messelberger; G Siegl; J J Alexander
Journal:  Infection       Date:  1979       Impact factor: 3.553

8.  Hepatitis A-virus in cell culture: I. propagation of different hepatitis A-virus isolates in a fetal rhesus monkey kidney cell line (Frhk-4).

Authors:  B Flehmig
Journal:  Med Microbiol Immunol       Date:  1980       Impact factor: 3.402

9.  Iodination of hepatitis A virus reveals a fourth structural polypeptide.

Authors:  A G Coulepis; S A Locarnini; I D Gust
Journal:  J Virol       Date:  1980-08       Impact factor: 5.103

10.  A protein covalently linked to poliovirus genome RNA.

Authors:  Y F Lee; A Nomoto; B M Detjen; E Wimmer
Journal:  Proc Natl Acad Sci U S A       Date:  1977-01       Impact factor: 11.205

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  51 in total

1.  A structural and primary sequence comparison of the viral RNA-dependent RNA polymerases.

Authors:  Jeremy A Bruenn
Journal:  Nucleic Acids Res       Date:  2003-04-01       Impact factor: 16.971

2.  Full-length genome of wild-type hepatitis A virus (DL3) isolated in China.

Authors:  Guo-Dong Liu; Ning-Zhu Hu; Yun-Zhang Hu
Journal:  World J Gastroenterol       Date:  2003-03       Impact factor: 5.742

3.  General primer-mediated polymerase chain reaction for detection of enteroviruses: application for diagnostic routine and persistent infections.

Authors:  G J Zoll; W J Melchers; H Kopecka; G Jambroes; H J van der Poel; J M Galama
Journal:  J Clin Microbiol       Date:  1992-01       Impact factor: 5.948

4.  Relationships among the positive strand and double-strand RNA viruses as viewed through their RNA-dependent RNA polymerases.

Authors:  J A Bruenn
Journal:  Nucleic Acids Res       Date:  1991-01-25       Impact factor: 16.971

5.  Expression of hepatitis A virus cDNA in Escherichia coli: antigenic VP1 recombinant protein.

Authors:  R Ostermayr; K von der Helm; V Gauss-Müller; E L Winnacker; F Deinhardt
Journal:  J Virol       Date:  1987-11       Impact factor: 5.103

Review 6.  Diagnosis of hepatitis a virus infection: a molecular approach.

Authors:  Omana V Nainan; Guoliang Xia; Gilberto Vaughan; Harold S Margolis
Journal:  Clin Microbiol Rev       Date:  2006-01       Impact factor: 26.132

7.  Mutations in both the 2B and 2C genes of hepatitis A virus are involved in adaptation to growth in cell culture.

Authors:  S U Emerson; Y K Huang; C McRill; M Lewis; R H Purcell
Journal:  J Virol       Date:  1992-02       Impact factor: 5.103

8.  Characterization by T1-oligonucleotide fingerprinting of three strains of human hepatitis A virus isolated in Italy.

Authors:  L Fiore; E De Paolis; F Novello; M Divizia; A Panà
Journal:  Eur J Epidemiol       Date:  1990-03       Impact factor: 8.082

9.  A temperature-sensitive defect of enterovirus 70 is located at the uridylylation of the genome-linked protein VPg in vitro.

Authors:  N Takeda; K Miyamura; T Takegami; S Yamazaki
Journal:  Virus Genes       Date:  1989-08       Impact factor: 2.332

10.  Characterization of a simian hepatitis A virus (HAV): antigenic and genetic comparison with human HAV.

Authors:  E A Brown; R W Jansen; S M Lemon
Journal:  J Virol       Date:  1989-11       Impact factor: 5.103

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