Literature DB >> 28104289

Nuclear Dynamics of Heterochromatin Repair.

Nuno Amaral1, Taehyun Ryu1, Xiao Li1, Irene Chiolo2.   

Abstract

Repairing double-strand breaks (DSBs) is particularly challenging in pericentromeric heterochromatin, where the abundance of repeated sequences exacerbates the risk of ectopic recombination and chromosome rearrangements. Recent studies in Drosophila cells revealed that faithful homologous recombination (HR) repair of heterochromatic DSBs relies on the relocalization of DSBs to the nuclear periphery before Rad51 recruitment. We summarize here the exciting progress in understanding this pathway, including conserved responses in mammalian cells and surprising similarities with mechanisms in yeast that deal with DSBs in distinct sites that are difficult to repair, including other repeated sequences. We will also point out some of the most important open questions in the field and emerging evidence suggesting that deregulating these pathways might have dramatic consequences for human health.
Copyright © 2017 Elsevier Ltd. All rights reserved.

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Year:  2017        PMID: 28104289      PMCID: PMC5285325          DOI: 10.1016/j.tig.2016.12.004

Source DB:  PubMed          Journal:  Trends Genet        ISSN: 0168-9525            Impact factor:   11.639


  116 in total

1.  Chromatin mobility is increased at sites of DNA double-strand breaks.

Authors:  P M Krawczyk; T Borovski; J Stap; T Cijsouw; R ten Cate; J P Medema; R Kanaar; N A P Franken; J A Aten
Journal:  J Cell Sci       Date:  2012-02-10       Impact factor: 5.285

2.  Structural basis for regulation of poly-SUMO chain by a SUMO-like domain of Nip45.

Authors:  Naotaka Sekiyama; Kyohei Arita; Yoshihiro Ikeda; Kohtaro Hashiguchi; Mariko Ariyoshi; Hidehito Tochio; Hisato Saitoh; Masahiro Shirakawa
Journal:  Proteins       Date:  2010-05-01

3.  KAP-1 phosphorylation regulates CHD3 nucleosome remodeling during the DNA double-strand break response.

Authors:  Aaron A Goodarzi; Thomas Kurka; Penelope A Jeggo
Journal:  Nat Struct Mol Biol       Date:  2011-06-05       Impact factor: 15.369

4.  Mutant nuclear lamin A leads to progressive alterations of epigenetic control in premature aging.

Authors:  Dale K Shumaker; Thomas Dechat; Alexander Kohlmaier; Stephen A Adam; Matthew R Bozovsky; Michael R Erdos; Maria Eriksson; Anne E Goldman; Satya Khuon; Francis S Collins; Thomas Jenuwein; Robert D Goldman
Journal:  Proc Natl Acad Sci U S A       Date:  2006-05-31       Impact factor: 11.205

5.  RNF4 interacts with both SUMO and nucleosomes to promote the DNA damage response.

Authors:  Lynda M Groocock; Minghua Nie; John Prudden; Davide Moiani; Tao Wang; Anton Cheltsov; Robert P Rambo; Andrew S Arvai; Chiharu Hitomi; John A Tainer; Karolin Luger; J Jefferson P Perry; Eros Lazzerini-Denchi; Michael N Boddy
Journal:  EMBO Rep       Date:  2014-04-08       Impact factor: 8.807

6.  Population-based 3D genome structure analysis reveals driving forces in spatial genome organization.

Authors:  Harianto Tjong; Wenyuan Li; Reza Kalhor; Chao Dai; Shengli Hao; Ke Gong; Yonggang Zhou; Haochen Li; Xianghong Jasmine Zhou; Mark A Le Gros; Carolyn A Larabell; Lin Chen; Frank Alber
Journal:  Proc Natl Acad Sci U S A       Date:  2016-03-07       Impact factor: 11.205

Review 7.  The role of nuclear architecture in genomic instability and ageing.

Authors:  Philipp Oberdoerffer; David A Sinclair
Journal:  Nat Rev Mol Cell Biol       Date:  2007-09       Impact factor: 94.444

Review 8.  An Overview of the Molecular Mechanisms of Recombinational DNA Repair.

Authors:  Stephen C Kowalczykowski
Journal:  Cold Spring Harb Perspect Biol       Date:  2015-11-02       Impact factor: 10.005

9.  Rosa26-GFP direct repeat (RaDR-GFP) mice reveal tissue- and age-dependence of homologous recombination in mammals in vivo.

Authors:  Michelle R Sukup-Jackson; Orsolya Kiraly; Jennifer E Kay; Li Na; Elizabeth A Rowland; Kelly E Winther; Danielle N Chow; Takafumi Kimoto; Tetsuya Matsuguchi; Vidya S Jonnalagadda; Vilena I Maklakova; Vijay R Singh; Dushan N Wadduwage; Jagath Rajapakse; Peter T C So; Lara S Collier; Bevin P Engelward
Journal:  PLoS Genet       Date:  2014-06-05       Impact factor: 5.917

10.  A role for nuclear envelope-bridging complexes in homology-directed repair.

Authors:  Rebecca K Swartz; Elisa C Rodriguez; Megan C King
Journal:  Mol Biol Cell       Date:  2014-06-18       Impact factor: 4.138

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  37 in total

1.  Arp2/3 and Unc45 maintain heterochromatin stability in Drosophila polytene chromosomes.

Authors:  George Dialynas; Laetitia Delabaere; Irene Chiolo
Journal:  Exp Biol Med (Maywood)       Date:  2019-07-31

Review 2.  Nuclear actin filaments in DNA repair dynamics.

Authors:  Christopher Patrick Caridi; Matthias Plessner; Robert Grosse; Irene Chiolo
Journal:  Nat Cell Biol       Date:  2019-09-03       Impact factor: 28.824

Review 3.  Heterochromatin and DNA damage repair: Use different histone variants and relax.

Authors:  Zdravko J Lorković; Frédéric Berger
Journal:  Nucleus       Date:  2017-11-23       Impact factor: 4.197

4.  Relocation of Collapsed Forks to the Nuclear Pore Complex Depends on Sumoylation of DNA Repair Proteins and Permits Rad51 Association.

Authors:  Jenna M Whalen; Nalini Dhingra; Lei Wei; Xiaolan Zhao; Catherine H Freudenreich
Journal:  Cell Rep       Date:  2020-05-12       Impact factor: 9.423

5.  Quantitative Methods to Investigate the 4D Dynamics of Heterochromatic Repair Sites in Drosophila Cells.

Authors:  Christopher P Caridi; Laetitia Delabaere; Harianto Tjong; Hannah Hopp; Devika Das; Frank Alber; Irene Chiolo
Journal:  Methods Enzymol       Date:  2018-02-26       Impact factor: 1.600

Review 6.  The Telomere Paradox: Stable Genome Preservation with Rapidly Evolving Proteins.

Authors:  Bastien Saint-Leandre; Mia T Levine
Journal:  Trends Genet       Date:  2020-02-12       Impact factor: 11.639

Review 7.  DNA Repair: The Search for Homology.

Authors:  James E Haber
Journal:  Bioessays       Date:  2018-03-30       Impact factor: 4.345

Review 8.  Actin' between phase separated domains for heterochromatin repair.

Authors:  Chetan C Rawal; Christopher P Caridi; Irene Chiolo
Journal:  DNA Repair (Amst)       Date:  2019-07-08

Review 9.  Structure-forming repeats and their impact on genome stability.

Authors:  Rebecca E Brown; Catherine H Freudenreich
Journal:  Curr Opin Genet Dev       Date:  2020-12-03       Impact factor: 5.578

10.  Live Cell Imaging of Nuclear Actin Filaments and Heterochromatic Repair foci in Drosophila and Mouse Cells.

Authors:  Colby See; Deepak Arya; Emily Lin; Irene Chiolo
Journal:  Methods Mol Biol       Date:  2021
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