Literature DB >> 24714598

RNF4 interacts with both SUMO and nucleosomes to promote the DNA damage response.

Lynda M Groocock1, Minghua Nie, John Prudden, Davide Moiani, Tao Wang, Anton Cheltsov, Robert P Rambo, Andrew S Arvai, Chiharu Hitomi, John A Tainer, Karolin Luger, J Jefferson P Perry, Eros Lazzerini-Denchi, Michael N Boddy.   

Abstract

The post-translational modification of DNA repair and checkpoint proteins by ubiquitin and small ubiquitin-like modifier (SUMO) critically orchestrates the DNA damage response (DDR). The ubiquitin ligase RNF4 integrates signaling by SUMO and ubiquitin, through its selective recognition and ubiquitination of SUMO-modified proteins. Here, we define a key new determinant for target discrimination by RNF4, in addition to interaction with SUMO. We identify a nucleosome-targeting motif within the RNF4 RING domain that can bind DNA and thereby enables RNF4 to selectively ubiquitinate nucleosomal histones. Furthermore, RNF4 nucleosome-targeting is crucially required for the repair of TRF2-depleted dysfunctional telomeres by 53BP1-mediated non-homologous end joining.

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Year:  2014        PMID: 24714598      PMCID: PMC4210088          DOI: 10.1002/embr.201338369

Source DB:  PubMed          Journal:  EMBO Rep        ISSN: 1469-221X            Impact factor:   8.807


  40 in total

1.  A map of protein-rRNA distribution in the 70 S Escherichia coli ribosome.

Authors:  D I Svergun; K H Nierhaus
Journal:  J Biol Chem       Date:  2000-05-12       Impact factor: 5.157

Review 2.  The ubiquitin- and SUMO-dependent signaling response to DNA double-strand breaks.

Authors:  Simon Bekker-Jensen; Niels Mailand
Journal:  FEBS Lett       Date:  2011-06-12       Impact factor: 4.124

Review 3.  Telomeres and human disease: ageing, cancer and beyond.

Authors:  Maria A Blasco
Journal:  Nat Rev Genet       Date:  2005-08       Impact factor: 53.242

Review 4.  Developing advanced X-ray scattering methods combined with crystallography and computation.

Authors:  J Jefferson P Perry; John A Tainer
Journal:  Methods       Date:  2013-01-29       Impact factor: 3.608

5.  53BP1 regulates DSB repair using Rif1 to control 5' end resection.

Authors:  Michal Zimmermann; Francisca Lottersberger; Sara B Buonomo; Agnel Sfeir; Titia de Lange
Journal:  Science       Date:  2013-01-10       Impact factor: 47.728

6.  RNF4, a SUMO-targeted ubiquitin E3 ligase, promotes DNA double-strand break repair.

Authors:  Yaron Galanty; Rimma Belotserkovskaya; Julia Coates; Stephen P Jackson
Journal:  Genes Dev       Date:  2012-06-01       Impact factor: 11.361

7.  SUMO-targeted ubiquitin E3 ligase RNF4 is required for the response of human cells to DNA damage.

Authors:  Yili Yin; Anne Seifert; Joy Shijia Chua; Jean-François Maure; Filip Golebiowski; Ronald T Hay
Journal:  Genes Dev       Date:  2012-06-01       Impact factor: 11.361

8.  Combining H/D exchange mass spectroscopy and computational docking reveals extended DNA-binding surface on uracil-DNA glycosylase.

Authors:  Victoria A Roberts; Michael E Pique; Simon Hsu; Sheng Li; Geir Slupphaug; Robert P Rambo; Jonathan W Jamison; Tong Liu; Jun H Lee; John A Tainer; Lynn F Ten Eyck; Virgil L Woods
Journal:  Nucleic Acids Res       Date:  2012-04-06       Impact factor: 16.971

9.  Mammalian SUMO E3-ligases PIAS1 and PIAS4 promote responses to DNA double-strand breaks.

Authors:  Yaron Galanty; Rimma Belotserkovskaya; Julia Coates; Sophie Polo; Kyle M Miller; Stephen P Jackson
Journal:  Nature       Date:  2009-12-17       Impact factor: 49.962

10.  Dysfunctional telomeres activate an ATM-ATR-dependent DNA damage response to suppress tumorigenesis.

Authors:  Xiaolan Guo; Yibin Deng; Yahong Lin; Wilfredo Cosme-Blanco; Suzanne Chan; Hua He; Guohua Yuan; Eric J Brown; Sandy Chang
Journal:  EMBO J       Date:  2007-10-18       Impact factor: 14.012

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  28 in total

Review 1.  Spatiotemporal regulation of posttranslational modifications in the DNA damage response.

Authors:  Nico P Dantuma; Haico van Attikum
Journal:  EMBO J       Date:  2015-12-01       Impact factor: 11.598

Review 2.  Nuclear Dynamics of Heterochromatin Repair.

Authors:  Nuno Amaral; Taehyun Ryu; Xiao Li; Irene Chiolo
Journal:  Trends Genet       Date:  2017-01-16       Impact factor: 11.639

Review 3.  What Combined Measurements From Structures and Imaging Tell Us About DNA Damage Responses.

Authors:  Chris A Brosey; Zamal Ahmed; Susan P Lees-Miller; John A Tainer
Journal:  Methods Enzymol       Date:  2017-05-29       Impact factor: 1.600

4.  Disruption of SUMO-targeted ubiquitin ligases Slx5-Slx8/RNF4 alters RecQ-like helicase Sgs1/BLM localization in yeast and human cells.

Authors:  Stefanie Böhm; Michael Joseph Mihalevic; Morgan Alexandra Casal; Kara Anne Bernstein
Journal:  DNA Repair (Amst)       Date:  2014-12-26

5.  RNF4-mediated polyubiquitination regulates the Fanconi anemia/BRCA pathway.

Authors:  Jenny Xie; Hyungjin Kim; Lisa A Moreau; Shannon Puhalla; Judy Garber; Muthana Al Abo; Shunichi Takeda; Alan D D'Andrea
Journal:  J Clin Invest       Date:  2015-03-09       Impact factor: 14.808

Review 6.  Reading chromatin signatures after DNA double-strand breaks.

Authors:  Marcus D Wilson; Daniel Durocher
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2017-10-05       Impact factor: 6.237

Review 7.  Envisioning the dynamics and flexibility of Mre11-Rad50-Nbs1 complex to decipher its roles in DNA replication and repair.

Authors:  Julien Lafrance-Vanasse; Gareth J Williams; John A Tainer
Journal:  Prog Biophys Mol Biol       Date:  2015-01-07       Impact factor: 3.667

8.  Covalent Ligand Screening Uncovers a RNF4 E3 Ligase Recruiter for Targeted Protein Degradation Applications.

Authors:  Carl C Ward; Jordan I Kleinman; Scott M Brittain; Patrick S Lee; Clive Yik Sham Chung; Kenneth Kim; Yana Petri; Jason R Thomas; John A Tallarico; Jeffrey M McKenna; Markus Schirle; Daniel K Nomura
Journal:  ACS Chem Biol       Date:  2019-05-13       Impact factor: 5.100

9.  Roles of RNA-binding Proteins and Post-transcriptional Regulation in Driving Male Germ Cell Development in the Mouse.

Authors:  Donny D Licatalosi
Journal:  Adv Exp Med Biol       Date:  2016       Impact factor: 2.622

Review 10.  Chromatin Regulation through Ubiquitin and Ubiquitin-like Histone Modifications.

Authors:  Robert M Vaughan; Ariana Kupai; Scott B Rothbart
Journal:  Trends Biochem Sci       Date:  2020-12-09       Impact factor: 13.807

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