Literature DB >> 29077523

Heterochromatin and DNA damage repair: Use different histone variants and relax.

Zdravko J Lorković1, Frédéric Berger1.   

Abstract

Repair of damaged DNA requires the activation of kinases, which in turn phosphorylate diverse proteins including histone H2A.X, an event conserved from yeast to human. By combining genetics, biochemical, and cytological approaches, we recently reported that, in addition to H2A.X, phosphorylation of histone variant H2A.W.7 is required for DNA damage response in Arabidopsis. This work provides direct evidence for the functional diversification of plant-specific H2A.W histone variants, which are tightly associated with heterochromatin. We place our findings in perspective of other recent reports and discuss how DNA damage is being recognized and repaired in heterochromatin.

Entities:  

Keywords:  DNA damage response; H2A.W; heterochromatin; histone variant; phosphorylation

Mesh:

Substances:

Year:  2017        PMID: 29077523      PMCID: PMC5788557          DOI: 10.1080/19491034.2017.1384893

Source DB:  PubMed          Journal:  Nucleus        ISSN: 1949-1034            Impact factor:   4.197


  39 in total

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Journal:  Nat Struct Biol       Date:  2003-11

Review 2.  The H1 linker histones: multifunctional proteins beyond the nucleosomal core particle.

Authors:  Sonja P Hergeth; Robert Schneider
Journal:  EMBO Rep       Date:  2015-10-15       Impact factor: 8.807

3.  Double-strand breaks in heterochromatin move outside of a dynamic HP1a domain to complete recombinational repair.

Authors:  Irene Chiolo; Aki Minoda; Serafin U Colmenares; Aris Polyzos; Sylvain V Costes; Gary H Karpen
Journal:  Cell       Date:  2011-02-25       Impact factor: 41.582

4.  Chromatin relaxation in response to DNA double-strand breaks is modulated by a novel ATM- and KAP-1 dependent pathway.

Authors:  Yael Ziv; Dana Bielopolski; Yaron Galanty; Claudia Lukas; Yoichi Taya; David C Schultz; Jiri Lukas; Simon Bekker-Jensen; Jiri Bartek; Yosef Shiloh
Journal:  Nat Cell Biol       Date:  2006-07-23       Impact factor: 28.824

5.  53BP1-dependent robust localized KAP-1 phosphorylation is essential for heterochromatic DNA double-strand break repair.

Authors:  Angela T Noon; Atsushi Shibata; Nicole Rief; Markus Löbrich; Grant S Stewart; Penelope A Jeggo; Aaron A Goodarzi
Journal:  Nat Cell Biol       Date:  2010-01-17       Impact factor: 28.824

Review 6.  Multiple facets of histone variant H2AX: a DNA double-strand-break marker with several biological functions.

Authors:  Valentina Turinetto; Claudia Giachino
Journal:  Nucleic Acids Res       Date:  2015-02-20       Impact factor: 16.971

7.  ATM Localization and Heterochromatin Repair Depend on Direct Interaction of the 53BP1-BRCT2 Domain with γH2AX.

Authors:  Robert A Baldock; Matthew Day; Oliver J Wilkinson; Ross Cloney; Penelope A Jeggo; Antony W Oliver; Felicity Z Watts; Laurence H Pearl
Journal:  Cell Rep       Date:  2015-11-25       Impact factor: 9.423

8.  Regulation of heterochromatic DNA replication by histone H3 lysine 27 methyltransferases.

Authors:  Yannick Jacob; Hume Stroud; Chantal Leblanc; Suhua Feng; Luting Zhuo; Elena Caro; Christiane Hassel; Crisanto Gutierrez; Scott D Michaels; Steven E Jacobsen
Journal:  Nature       Date:  2010-07-14       Impact factor: 49.962

9.  Heterochromatin is refractory to gamma-H2AX modification in yeast and mammals.

Authors:  Jung-Ae Kim; Michael Kruhlak; Farokh Dotiwala; André Nussenzweig; James E Haber
Journal:  J Cell Biol       Date:  2007-07-16       Impact factor: 10.539

10.  Cervantes and Quijote protect heterochromatin from aberrant recombination and lead the way to the nuclear periphery.

Authors:  Taehyun Ryu; Melissa R Bonner; Irene Chiolo
Journal:  Nucleus       Date:  2016-09-27       Impact factor: 4.197

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  5 in total

Review 1.  Seminars in cell and development biology on histone variants remodelers of H2A variants associated with heterochromatin.

Authors:  Frédéric Berger; Kathrin Muegge; Eric J Richards
Journal:  Semin Cell Dev Biol       Date:  2022-03-03       Impact factor: 7.499

Review 2.  Histone H2A variants: Diversifying chromatin to ensure genome integrity.

Authors:  Philipp Oberdoerffer; Kyle M Miller
Journal:  Semin Cell Dev Biol       Date:  2022-03-21       Impact factor: 7.499

3.  Histone H2A variants confer specific properties to nucleosomes and impact on chromatin accessibility.

Authors:  Akihisa Osakabe; Zdravko J Lorkovic; Wataru Kobayashi; Hiroaki Tachiwana; Ramesh Yelagandula; Hitoshi Kurumizaka; Frédéric Berger
Journal:  Nucleic Acids Res       Date:  2018-09-06       Impact factor: 16.971

4.  ATM-dependent activation of SIM2s regulates homologous recombination and epithelial-mesenchymal transition.

Authors:  Scott J Pearson; Tapasree Roy Sarkar; Cole M McQueen; Jessica Elswood; Emily E Schmitt; Steven W Wall; Kelly C Scribner; Garhett Wyatt; Rola Barhoumi; Fariba Behbod; Monique Rijnkels; Weston W Porter
Journal:  Oncogene       Date:  2018-12-10       Impact factor: 9.867

5.  The consequences of differential origin licensing dynamics in distinct chromatin environments.

Authors:  Liu Mei; Katarzyna M Kedziora; Eun-Ah Song; Jeremy E Purvis; Jeanette Gowen Cook
Journal:  Nucleic Acids Res       Date:  2022-09-23       Impact factor: 19.160

  5 in total

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