Literature DB >> 26928935

The molecular basis of polysaccharide cleavage by lytic polysaccharide monooxygenases.

Kristian E H Frandsen1, Thomas J Simmons2, Paul Dupree2, Jens-Christian N Poulsen1, Glyn R Hemsworth3, Luisa Ciano3, Esther M Johnston3, Morten Tovborg4, Katja S Johansen4, Pernille von Freiesleben4, Laurence Marmuse5, Sébastien Fort5, Sylvain Cottaz5, Hugues Driguez5, Bernard Henrissat6,7,8, Nicolas Lenfant6,7, Floriana Tuna9, Amgalanbaatar Baldansuren9, Gideon J Davies3, Leila Lo Leggio1, Paul H Walton3.   

Abstract

Lytic polysaccharide monooxygenases (LPMOs) are copper-containing enzymes that oxidatively break down recalcitrant polysaccharides such as cellulose and chitin. Since their discovery, LPMOs have become integral factors in the industrial utilization of biomass, especially in the sustainable generation of cellulosic bioethanol. We report here a structural determination of an LPMO-oligosaccharide complex, yielding detailed insights into the mechanism of action of these enzymes. Using a combination of structure and electron paramagnetic resonance spectroscopy, we reveal the means by which LPMOs interact with saccharide substrates. We further uncover electronic and structural features of the enzyme active site, showing how LPMOs orchestrate the reaction of oxygen with polysaccharide chains.

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Year:  2016        PMID: 26928935      PMCID: PMC4817220          DOI: 10.1038/nchembio.2029

Source DB:  PubMed          Journal:  Nat Chem Biol        ISSN: 1552-4450            Impact factor:   15.040


  45 in total

1.  Use of a fluorescence plate reader for measuring kinetic parameters with inner filter effect correction.

Authors:  Y Liu; W Kati; C M Chen; R Tripathi; A Molla; W Kohlbrenner
Journal:  Anal Biochem       Date:  1999-02-15       Impact factor: 3.365

2.  Biomass recalcitrance: engineering plants and enzymes for biofuels production.

Authors:  Michael E Himmel; Shi-You Ding; David K Johnson; William S Adney; Mark R Nimlos; John W Brady; Thomas D Foust
Journal:  Science       Date:  2007-02-09       Impact factor: 47.728

3.  Cleavage of cellulose by a CBM33 protein.

Authors:  Zarah Forsberg; Gustav Vaaje-Kolstad; Bjørge Westereng; Anne C Bunæs; Yngve Stenstrøm; Alasdair MacKenzie; Morten Sørlie; Svein J Horn; Vincent G H Eijsink
Journal:  Protein Sci       Date:  2011-08-08       Impact factor: 6.725

4.  Structural and Functional Characterization of a Lytic Polysaccharide Monooxygenase with Broad Substrate Specificity.

Authors:  Anna S Borisova; Trine Isaksen; Maria Dimarogona; Abhishek A Kognole; Geir Mathiesen; Anikó Várnai; Åsmund K Røhr; Christina M Payne; Morten Sørlie; Mats Sandgren; Vincent G H Eijsink
Journal:  J Biol Chem       Date:  2015-07-15       Impact factor: 5.157

Review 5.  Elaboration of copper-oxygen mediated C-H activation chemistry in consideration of future fuel and feedstock generation.

Authors:  Jung Yoon Lee; Kenneth D Karlin
Journal:  Curr Opin Chem Biol       Date:  2015-03-08       Impact factor: 8.822

6.  Carbohydrate-aromatic interactions.

Authors:  Juan Luis Asensio; Ana Ardá; Francisco Javier Cañada; Jesús Jiménez-Barbero
Journal:  Acc Chem Res       Date:  2012-06-15       Impact factor: 22.384

7.  Noncovalent Lone Pair⋅⋅⋅(No-π!)-Heteroarene Interactions: The Janus-Faced Hydroxy Group.

Authors:  Ilias Pavlakos; Tanzeel Arif; Abil E Aliev; William B Motherwell; Graham J Tizzard; Simon J Coles
Journal:  Angew Chem Int Ed Engl       Date:  2015-05-27       Impact factor: 15.336

8.  Insights into the oxidative degradation of cellulose by a copper metalloenzyme that exploits biomass components.

Authors:  R Jason Quinlan; Matt D Sweeney; Leila Lo Leggio; Harm Otten; Jens-Christian N Poulsen; Katja Salomon Johansen; Kristian B R M Krogh; Christian Isak Jørgensen; Morten Tovborg; Annika Anthonsen; Theodora Tryfona; Clive P Walter; Paul Dupree; Feng Xu; Gideon J Davies; Paul H Walton
Journal:  Proc Natl Acad Sci U S A       Date:  2011-08-29       Impact factor: 11.205

9.  The copper active site of CBM33 polysaccharide oxygenases.

Authors:  Glyn R Hemsworth; Edward J Taylor; Robbert Q Kim; Rebecca C Gregory; Sally J Lewis; Johan P Turkenburg; Alison Parkin; Gideon J Davies; Paul H Walton
Journal:  J Am Chem Soc       Date:  2013-04-10       Impact factor: 15.419

10.  Substrate specificity and regioselectivity of fungal AA9 lytic polysaccharide monooxygenases secreted by Podospora anserina.

Authors:  Chloé Bennati-Granier; Sona Garajova; Charlotte Champion; Sacha Grisel; Mireille Haon; Simeng Zhou; Mathieu Fanuel; David Ropartz; Hélène Rogniaux; Isabelle Gimbert; Eric Record; Jean-Guy Berrin
Journal:  Biotechnol Biofuels       Date:  2015-06-20       Impact factor: 6.040

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  89 in total

Review 1.  Physiological and Molecular Understanding of Bacterial Polysaccharide Monooxygenases.

Authors:  Marco Agostoni; John A Hangasky; Michael A Marletta
Journal:  Microbiol Mol Biol Rev       Date:  2017-06-28       Impact factor: 11.056

Review 2.  Copper-Promoted Functionalization of Organic Molecules: from Biologically Relevant Cu/O2 Model Systems to Organometallic Transformations.

Authors:  Rachel Trammell; Khashayar Rajabimoghadam; Isaac Garcia-Bosch
Journal:  Chem Rev       Date:  2019-01-30       Impact factor: 60.622

3.  Determination of the Cu(III)-OH Bond Distance by Resonance Raman Spectroscopy Using a Normalized Version of Badger's Rule.

Authors:  Andrew D Spaeth; Nicole L Gagnon; Debanjan Dhar; Gereon M Yee; William B Tolman
Journal:  J Am Chem Soc       Date:  2017-03-20       Impact factor: 15.419

Review 4.  Activation of dioxygen by copper metalloproteins and insights from model complexes.

Authors:  David A Quist; Daniel E Diaz; Jeffrey J Liu; Kenneth D Karlin
Journal:  J Biol Inorg Chem       Date:  2016-12-05       Impact factor: 3.358

5.  Kinetics of H2O2-driven degradation of chitin by a bacterial lytic polysaccharide monooxygenase.

Authors:  Silja Kuusk; Bastien Bissaro; Piret Kuusk; Zarah Forsberg; Vincent G H Eijsink; Morten Sørlie; Priit Väljamäe
Journal:  J Biol Chem       Date:  2017-11-14       Impact factor: 5.157

6.  Oxidative cleavage of polysaccharides by monocopper enzymes depends on H2O2.

Authors:  Bastien Bissaro; Åsmund K Røhr; Gerdt Müller; Piotr Chylenski; Morten Skaugen; Zarah Forsberg; Svein J Horn; Gustav Vaaje-Kolstad; Vincent G H Eijsink
Journal:  Nat Chem Biol       Date:  2017-08-28       Impact factor: 15.040

7.  Oxygen Activation at the Active Site of a Fungal Lytic Polysaccharide Monooxygenase.

Authors:  William B O'Dell; Pratul K Agarwal; Flora Meilleur
Journal:  Angew Chem Int Ed Engl       Date:  2016-12-22       Impact factor: 15.336

8.  Formally Copper(III)-Alkylperoxo Complexes as Models of Possible Intermediates in Monooxygenase Enzymes.

Authors:  Benjamin D Neisen; Nicole L Gagnon; Debanjan Dhar; Andrew D Spaeth; William B Tolman
Journal:  J Am Chem Soc       Date:  2017-07-19       Impact factor: 15.419

9.  High-resolution structure of a lytic polysaccharide monooxygenase from Hypocrea jecorina reveals a predicted linker as an integral part of the catalytic domain.

Authors:  Henrik Hansson; Saeid Karkehabadi; Nils Mikkelsen; Nicholai R Douglas; Steve Kim; Anna Lam; Thijs Kaper; Brad Kelemen; Katlyn K Meier; Stephen M Jones; Edward I Solomon; Mats Sandgren
Journal:  J Biol Chem       Date:  2017-09-12       Impact factor: 5.157

10.  Lytic xylan oxidases from wood-decay fungi unlock biomass degradation.

Authors:  Marie Couturier; Simon Ladevèze; Gerlind Sulzenbacher; Luisa Ciano; Mathieu Fanuel; Céline Moreau; Ana Villares; Bernard Cathala; Florence Chaspoul; Kristian E Frandsen; Aurore Labourel; Isabelle Herpoël-Gimbert; Sacha Grisel; Mireille Haon; Nicolas Lenfant; Hélène Rogniaux; David Ropartz; Gideon J Davies; Marie-Noëlle Rosso; Paul H Walton; Bernard Henrissat; Jean-Guy Berrin
Journal:  Nat Chem Biol       Date:  2018-01-29       Impact factor: 15.040

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