Literature DB >> 29138240

Kinetics of H2O2-driven degradation of chitin by a bacterial lytic polysaccharide monooxygenase.

Silja Kuusk1, Bastien Bissaro2, Piret Kuusk3, Zarah Forsberg2, Vincent G H Eijsink2, Morten Sørlie2, Priit Väljamäe4.   

Abstract

Lytic polysaccharide monooxygenases (LPMOs) catalyze the oxidative cleavage of glycosidic bonds in recalcitrant polysaccharides, such as cellulose and chitin, and are of interest in biotechnological utilization of these abundant biomaterials. It has recently been shown that LPMOs can use H2O2, instead of O2, as a cosubstrate. This peroxygenase-like reaction by a monocopper enzyme is unprecedented in nature and opens new avenues in chemistry and enzymology. Here, we provide the first detailed kinetic characterization of chitin degradation by the bacterial LPMO chitin-binding protein CBP21 using H2O2 as cosubstrate. The use of 14C-labeled chitin provided convenient and sensitive detection of the released soluble products, which enabled detailed kinetic measurements. The kcat for chitin oxidation found here (5.6 s-1) is more than an order of magnitude higher than previously reported (apparent) rate constants for reactions containing O2 but no added H2O2 The kcat/Km for H2O2-driven degradation of chitin was on the order of 106 m-1 s-1, indicating that LPMOs have catalytic efficiencies similar to those of peroxygenases. Of note, H2O2 also inactivated CBP21, but the second-order rate constant for inactivation was about 3 orders of magnitude lower than that for catalysis. In light of the observed CBP21 inactivation at higher H2O2 levels, we conclude that controlled generation of H2O2in situ seems most optimal for fueling LPMO-catalyzed oxidation of polysaccharides.
© 2018 by The American Society for Biochemistry and Molecular Biology, Inc.

Entities:  

Keywords:  Serratia marcescens; copper monooxygenase; enzyme inactivation; enzyme kinetics; hydrogen peroxide; polysaccharide

Mesh:

Substances:

Year:  2017        PMID: 29138240      PMCID: PMC5767858          DOI: 10.1074/jbc.M117.817593

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  37 in total

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Authors:  Brenda Valderrama; Marcela Ayala; Rafael Vazquez-Duhalt
Journal:  Chem Biol       Date:  2002-05

2.  Cleavage of cellulose by a CBM33 protein.

Authors:  Zarah Forsberg; Gustav Vaaje-Kolstad; Bjørge Westereng; Anne C Bunæs; Yngve Stenstrøm; Alasdair MacKenzie; Morten Sørlie; Svein J Horn; Vincent G H Eijsink
Journal:  Protein Sci       Date:  2011-08-08       Impact factor: 6.725

3.  Oxidative cleavage of polysaccharides by monocopper enzymes depends on H2O2.

Authors:  Bastien Bissaro; Åsmund K Røhr; Gerdt Müller; Piotr Chylenski; Morten Skaugen; Zarah Forsberg; Svein J Horn; Gustav Vaaje-Kolstad; Vincent G H Eijsink
Journal:  Nat Chem Biol       Date:  2017-08-28       Impact factor: 15.040

4.  Chitin binding protein (CBP21) in the culture supernatant of Serratia marcescens 2170.

Authors:  K Suzuki; M Suzuki; M Taiyoji; N Nikaidou; T Watanabe
Journal:  Biosci Biotechnol Biochem       Date:  1998-01       Impact factor: 2.043

5.  Conversion of α-chitin substrates with varying particle size and crystallinity reveals substrate preferences of the chitinases and lytic polysaccharide monooxygenase of Serratia marcescens.

Authors:  Yuko S Nakagawa; Vincent G H Eijsink; Kazuhide Totani; Gustav Vaaje-Kolstad
Journal:  J Agric Food Chem       Date:  2013-11-08       Impact factor: 5.279

6.  Insights into the oxidative degradation of cellulose by a copper metalloenzyme that exploits biomass components.

Authors:  R Jason Quinlan; Matt D Sweeney; Leila Lo Leggio; Harm Otten; Jens-Christian N Poulsen; Katja Salomon Johansen; Kristian B R M Krogh; Christian Isak Jørgensen; Morten Tovborg; Annika Anthonsen; Theodora Tryfona; Clive P Walter; Paul Dupree; Feng Xu; Gideon J Davies; Paul H Walton
Journal:  Proc Natl Acad Sci U S A       Date:  2011-08-29       Impact factor: 11.205

7.  Lytic polysaccharide monooxygenases from Myceliophthora thermophila C1 differ in substrate preference and reducing agent specificity.

Authors:  Matthias Frommhagen; Martijn J Koetsier; Adrie H Westphal; Jaap Visser; Sandra W A Hinz; Jean-Paul Vincken; Willem J H van Berkel; Mirjam A Kabel; Harry Gruppen
Journal:  Biotechnol Biofuels       Date:  2016-08-31       Impact factor: 6.040

8.  The yeast Geotrichum candidum encodes functional lytic polysaccharide monooxygenases.

Authors:  Simon Ladevèze; Mireille Haon; Ana Villares; Bernard Cathala; Sacha Grisel; Isabelle Herpoël-Gimbert; Bernard Henrissat; Jean-Guy Berrin
Journal:  Biotechnol Biofuels       Date:  2017-09-12       Impact factor: 6.040

9.  Boosting LPMO-driven lignocellulose degradation by polyphenol oxidase-activated lignin building blocks.

Authors:  Matthias Frommhagen; Sumanth Kumar Mutte; Adrie H Westphal; Martijn J Koetsier; Sandra W A Hinz; Jaap Visser; Jean-Paul Vincken; Dolf Weijers; Willem J H van Berkel; Harry Gruppen; Mirjam A Kabel
Journal:  Biotechnol Biofuels       Date:  2017-05-10       Impact factor: 6.040

10.  Structural and electronic determinants of lytic polysaccharide monooxygenase reactivity on polysaccharide substrates.

Authors:  T J Simmons; K E H Frandsen; L Ciano; T Tryfona; N Lenfant; J C Poulsen; L F L Wilson; T Tandrup; M Tovborg; K Schnorr; K S Johansen; B Henrissat; P H Walton; L Lo Leggio; P Dupree
Journal:  Nat Commun       Date:  2017-10-20       Impact factor: 14.919

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  34 in total

1.  Kinetic insights into the role of the reductant in H2O2-driven degradation of chitin by a bacterial lytic polysaccharide monooxygenase.

Authors:  Silja Kuusk; Riin Kont; Piret Kuusk; Agnes Heering; Morten Sørlie; Bastien Bissaro; Vincent G H Eijsink; Priit Väljamäe
Journal:  J Biol Chem       Date:  2018-12-04       Impact factor: 5.157

2.  Kinetic analysis of amino acid radicals formed in H2O2-driven CuI LPMO reoxidation implicates dominant homolytic reactivity.

Authors:  Stephen M Jones; Wesley J Transue; Katlyn K Meier; Bradley Kelemen; Edward I Solomon
Journal:  Proc Natl Acad Sci U S A       Date:  2020-05-15       Impact factor: 11.205

3.  A fungal family of lytic polysaccharide monooxygenase-like copper proteins.

Authors:  Aurore Labourel; Kristian E H Frandsen; Feng Zhang; Nicolas Brouilly; Sacha Grisel; Mireille Haon; Luisa Ciano; David Ropartz; Mathieu Fanuel; Francis Martin; David Navarro; Marie-Noëlle Rosso; Tobias Tandrup; Bastien Bissaro; Katja S Johansen; Anastasia Zerva; Paul H Walton; Bernard Henrissat; Leila Lo Leggio; Jean-Guy Berrin
Journal:  Nat Chem Biol       Date:  2020-01-13       Impact factor: 15.040

4.  Methylation of the N-terminal histidine protects a lytic polysaccharide monooxygenase from auto-oxidative inactivation.

Authors:  Dejan M Petrović; Bastien Bissaro; Piotr Chylenski; Morten Skaugen; Morten Sørlie; Marianne S Jensen; Finn L Aachmann; Gaston Courtade; Anikó Várnai; Vincent G H Eijsink
Journal:  Protein Sci       Date:  2018-09       Impact factor: 6.725

5.  Activity and substrate specificity of lytic polysaccharide monooxygenases: An ATR FTIR-based sensitive assay tested on a novel species from Pseudomonas putida.

Authors:  Ilenia Serra; Daniele Piccinini; Alessandro Paradisi; Luisa Ciano; Marzia Bellei; Carlo Augusto Bortolotti; Gianantonio Battistuzzi; Marco Sola; Paul H Walton; Giulia Di Rocco
Journal:  Protein Sci       Date:  2021-12-20       Impact factor: 6.725

6.  Natural photoredox catalysts promote light-driven lytic polysaccharide monooxygenase reactions and enzymatic turnover of biomass.

Authors:  Eirik G Kommedal; Fredrikke Sæther; Thomas Hahn; Vincent G H Eijsink
Journal:  Proc Natl Acad Sci U S A       Date:  2022-08-15       Impact factor: 12.779

Review 7.  Synthetic Fe/Cu Complexes: Toward Understanding Heme-Copper Oxidase Structure and Function.

Authors:  Suzanne M Adam; Gayan B Wijeratne; Patrick J Rogler; Daniel E Diaz; David A Quist; Jeffrey J Liu; Kenneth D Karlin
Journal:  Chem Rev       Date:  2018-10-29       Impact factor: 60.622

8.  Molecular mechanism of the chitinolytic peroxygenase reaction.

Authors:  Bastien Bissaro; Bennett Streit; Ingvild Isaksen; Vincent G H Eijsink; Gregg T Beckham; Jennifer L DuBois; Åsmund K Røhr
Journal:  Proc Natl Acad Sci U S A       Date:  2020-01-06       Impact factor: 11.205

9.  Enhanced in situ H2O2 production explains synergy between an LPMO with a cellulose-binding domain and a single-domain LPMO.

Authors:  Anton A Stepnov; Vincent G H Eijsink; Zarah Forsberg
Journal:  Sci Rep       Date:  2022-04-12       Impact factor: 4.379

10.  The Fish Pathogen Aliivibrio salmonicida LFI1238 Can Degrade and Metabolize Chitin despite Gene Disruption in the Chitinolytic Pathway.

Authors:  Anna Skåne; Giusi Minniti; Jennifer S M Loose; Sophanit Mekasha; Bastien Bissaro; Geir Mathiesen; Magnus Ø Arntzen; Gustav Vaaje-Kolstad
Journal:  Appl Environ Microbiol       Date:  2021-09-10       Impact factor: 4.792

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