Literature DB >> 21876164

Insights into the oxidative degradation of cellulose by a copper metalloenzyme that exploits biomass components.

R Jason Quinlan1, Matt D Sweeney, Leila Lo Leggio, Harm Otten, Jens-Christian N Poulsen, Katja Salomon Johansen, Kristian B R M Krogh, Christian Isak Jørgensen, Morten Tovborg, Annika Anthonsen, Theodora Tryfona, Clive P Walter, Paul Dupree, Feng Xu, Gideon J Davies, Paul H Walton.   

Abstract

The enzymatic degradation of recalcitrant plant biomass is one of the key industrial challenges of the 21st century. Accordingly, there is a continuing drive to discover new routes to promote polysaccharide degradation. Perhaps the most promising approach involves the application of "cellulase-enhancing factors," such as those from the glycoside hydrolase (CAZy) GH61 family. Here we show that GH61 enzymes are a unique family of copper-dependent oxidases. We demonstrate that copper is needed for GH61 maximal activity and that the formation of cellodextrin and oxidized cellodextrin products by GH61 is enhanced in the presence of small molecule redox-active cofactors such as ascorbate and gallate. By using electron paramagnetic resonance spectroscopy and single-crystal X-ray diffraction, the active site of GH61 is revealed to contain a type II copper and, uniquely, a methylated histidine in the copper's coordination sphere, thus providing an innovative paradigm in bioinorganic enzymatic catalysis.

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Year:  2011        PMID: 21876164      PMCID: PMC3174640          DOI: 10.1073/pnas.1105776108

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  28 in total

1.  Lignocellulosic polysaccharides and lignin degradation by wood decay fungi: the relevance of nonenzymatic Fenton-based reactions.

Authors:  Valdeir Arantes; Adriane M F Milagres; Timothy R Filley; Barry Goodell
Journal:  J Ind Microbiol Biotechnol       Date:  2010-08-14       Impact factor: 3.346

2.  ACORN2: new developments of the ACORN concept.

Authors:  E J Dodson; M M Woolfson
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-08-14

Review 3.  Structural and sequence-based classification of glycoside hydrolases.

Authors:  B Henrissat; G Davies
Journal:  Curr Opin Struct Biol       Date:  1997-10       Impact factor: 6.809

4.  Polysaccharide analysis using carbohydrate gel electrophoresis: a method to study plant cell wall polysaccharides and polysaccharide hydrolases.

Authors:  Florence Goubet; Peter Jackson; Michael J Deery; Paul Dupree
Journal:  Anal Biochem       Date:  2002-01-01       Impact factor: 3.365

5.  Methylation of the imidazole side chains of the Alzheimer disease amyloid-beta peptide results in abolition of superoxide dismutase-like structures and inhibition of neurotoxicity.

Authors:  Anna K Tickler; Danielle G Smith; Giuseppe D Ciccotosto; Deborah J Tew; Cyril C Curtain; Darryl Carrington; Colin L Masters; Ashley I Bush; Robert A Cherny; Roberto Cappai; John D Wade; Kevin J Barnham
Journal:  J Biol Chem       Date:  2005-01-24       Impact factor: 5.157

6.  Oxidation of methane by a biological dicopper centre.

Authors:  Ramakrishnan Balasubramanian; Stephen M Smith; Swati Rawat; Liliya A Yatsunyk; Timothy L Stemmler; Amy C Rosenzweig
Journal:  Nature       Date:  2010-04-21       Impact factor: 49.962

7.  Role of lipoprotein-copper complex in copper catalyzed-peroxidation of low-density lipoprotein.

Authors:  M Kuzuya; K Yamada; T Hayashi; C Funaki; M Naito; K Asai; F Kuzuya
Journal:  Biochim Biophys Acta       Date:  1992-02-12

8.  The first structure of a glycoside hydrolase family 61 member, Cel61B from Hypocrea jecorina, at 1.6 A resolution.

Authors:  Saeid Karkehabadi; Henrik Hansson; Steve Kim; Kathleen Piens; Colin Mitchinson; Mats Sandgren
Journal:  J Mol Biol       Date:  2008-08-13       Impact factor: 5.469

9.  Genome, transcriptome, and secretome analysis of wood decay fungus Postia placenta supports unique mechanisms of lignocellulose conversion.

Authors:  Diego Martinez; Jean Challacombe; Ingo Morgenstern; David Hibbett; Monika Schmoll; Christian P Kubicek; Patricia Ferreira; Francisco J Ruiz-Duenas; Angel T Martinez; Phil Kersten; Kenneth E Hammel; Amber Vanden Wymelenberg; Jill Gaskell; Erika Lindquist; Grzegorz Sabat; Sandra Splinter Bondurant; Luis F Larrondo; Paulo Canessa; Rafael Vicuna; Jagjit Yadav; Harshavardhan Doddapaneni; Venkataramanan Subramanian; Antonio G Pisabarro; José L Lavín; José A Oguiza; Emma Master; Bernard Henrissat; Pedro M Coutinho; Paul Harris; Jon Karl Magnuson; Scott E Baker; Kenneth Bruno; William Kenealy; Patrik J Hoegger; Ursula Kües; Preethi Ramaiya; Susan Lucas; Asaf Salamov; Harris Shapiro; Hank Tu; Christine L Chee; Monica Misra; Gary Xie; Sarah Teter; Debbie Yaver; Tim James; Martin Mokrejs; Martin Pospisek; Igor V Grigoriev; Thomas Brettin; Dan Rokhsar; Randy Berka; Dan Cullen
Journal:  Proc Natl Acad Sci U S A       Date:  2009-02-04       Impact factor: 11.205

10.  Developments in the CCP4 molecular-graphics project.

Authors:  Liz Potterton; Stuart McNicholas; Eugene Krissinel; Jan Gruber; Kevin Cowtan; Paul Emsley; Garib N Murshudov; Serge Cohen; Anastassis Perrakis; Martin Noble
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2004-11-26
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  287 in total

1.  Kinetic insights into the role of the reductant in H2O2-driven degradation of chitin by a bacterial lytic polysaccharide monooxygenase.

Authors:  Silja Kuusk; Riin Kont; Piret Kuusk; Agnes Heering; Morten Sørlie; Bastien Bissaro; Vincent G H Eijsink; Priit Väljamäe
Journal:  J Biol Chem       Date:  2018-12-04       Impact factor: 5.157

2.  Pre-steady-state kinetics for hydrolysis of insoluble cellulose by cellobiohydrolase Cel7A.

Authors:  Nicolaj Cruys-Bagger; Jens Elmerdahl; Eigil Praestgaard; Hirosuke Tatsumi; Nikolaj Spodsberg; Kim Borch; Peter Westh
Journal:  J Biol Chem       Date:  2012-04-09       Impact factor: 5.157

3.  Recombinant Expression of Trichoderma reesei Cel61A in Pichia pastoris: Optimizing Yield and N-terminal Processing.

Authors:  Magali Tanghe; Barbara Danneels; Andrea Camattari; Anton Glieder; Isabel Vandenberghe; Bart Devreese; Ingeborg Stals; Tom Desmet
Journal:  Mol Biotechnol       Date:  2015-12       Impact factor: 2.695

4.  Substrate selectivity in starch polysaccharide monooxygenases.

Authors:  Van V Vu; John A Hangasky; Tyler C Detomasi; Skylar J W Henry; Son Tung Ngo; Elise A Span; Michael A Marletta
Journal:  J Biol Chem       Date:  2019-06-24       Impact factor: 5.157

5.  Metalloproteins: A new face for biomass breakdown.

Authors:  Shinya Fushinobu
Journal:  Nat Chem Biol       Date:  2013-12-22       Impact factor: 15.040

6.  Structural characterization of a unique marine animal family 7 cellobiohydrolase suggests a mechanism of cellulase salt tolerance.

Authors:  Marcelo Kern; John E McGeehan; Simon D Streeter; Richard N A Martin; Katrin Besser; Luisa Elias; Will Eborall; Graham P Malyon; Christina M Payne; Michael E Himmel; Kirk Schnorr; Gregg T Beckham; Simon M Cragg; Neil C Bruce; Simon J McQueen-Mason
Journal:  Proc Natl Acad Sci U S A       Date:  2013-06-03       Impact factor: 11.205

7.  Glycosylated linkers in multimodular lignocellulose-degrading enzymes dynamically bind to cellulose.

Authors:  Christina M Payne; Michael G Resch; Liqun Chen; Michael F Crowley; Michael E Himmel; Larry E Taylor; Mats Sandgren; Jerry Ståhlberg; Ingeborg Stals; Zhongping Tan; Gregg T Beckham
Journal:  Proc Natl Acad Sci U S A       Date:  2013-08-19       Impact factor: 11.205

Review 8.  Metals and Methanotrophy.

Authors:  Jeremy D Semrau; Alan A DiSpirito; Wenyu Gu; Sukhwan Yoon
Journal:  Appl Environ Microbiol       Date:  2018-03-01       Impact factor: 4.792

9.  High-resolution structure of a lytic polysaccharide monooxygenase from Hypocrea jecorina reveals a predicted linker as an integral part of the catalytic domain.

Authors:  Henrik Hansson; Saeid Karkehabadi; Nils Mikkelsen; Nicholai R Douglas; Steve Kim; Anna Lam; Thijs Kaper; Brad Kelemen; Katlyn K Meier; Stephen M Jones; Edward I Solomon; Mats Sandgren
Journal:  J Biol Chem       Date:  2017-09-12       Impact factor: 5.157

10.  Crystal structure and computational characterization of the lytic polysaccharide monooxygenase GH61D from the Basidiomycota fungus Phanerochaete chrysosporium.

Authors:  Miao Wu; Gregg T Beckham; Anna M Larsson; Takuya Ishida; Seonah Kim; Christina M Payne; Michael E Himmel; Michael F Crowley; Svein J Horn; Bjørge Westereng; Kiyohiko Igarashi; Masahiro Samejima; Jerry Ståhlberg; Vincent G H Eijsink; Mats Sandgren
Journal:  J Biol Chem       Date:  2013-03-22       Impact factor: 5.157

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