Literature DB >> 25910205

Single-Particle Cryo-EM at Crystallographic Resolution.

Yifan Cheng1.   

Abstract

Until only a few years ago, single-particle electron cryo-microscopy (cryo-EM) was usually not the first choice for many structural biologists due to its limited resolution in the range of nanometer to subnanometer. Now, this method rivals X-ray crystallography in terms of resolution and can be used to determine atomic structures of macromolecules that are either refractory to crystallization or difficult to crystallize in specific functional states. In this review, I discuss the recent breakthroughs in both hardware and software that transformed cryo-microscopy, enabling understanding of complex biomolecules and their functions at atomic level.
Copyright © 2015 Elsevier Inc. All rights reserved.

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Year:  2015        PMID: 25910205      PMCID: PMC4409662          DOI: 10.1016/j.cell.2015.03.049

Source DB:  PubMed          Journal:  Cell        ISSN: 0092-8674            Impact factor:   41.582


  70 in total

Review 1.  Single particle electron cryo-microscopy of a mammalian ion channel.

Authors:  Maofu Liao; Erhu Cao; David Julius; Yifan Cheng
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2.  Electron microscopy: The challenges of graphene.

Authors:  Knut W Urban
Journal:  Nat Mater       Date:  2011-03       Impact factor: 43.841

3.  Visualization of a 4-helix bundle in the hepatitis B virus capsid by cryo-electron microscopy.

Authors:  J F Conway; N Cheng; A Zlotnick; P T Wingfield; S J Stahl; A C Steven
Journal:  Nature       Date:  1997-03-06       Impact factor: 49.962

Review 4.  A tale of chromatin and transcription in 100 structures.

Authors:  Patrick Cramer
Journal:  Cell       Date:  2014-11-20       Impact factor: 41.582

5.  Structure of the yeast mitochondrial large ribosomal subunit.

Authors:  Alexey Amunts; Alan Brown; Xiao-Chen Bai; Jose L Llácer; Tanweer Hussain; Paul Emsley; Fei Long; Garib Murshudov; Sjors H W Scheres; V Ramakrishnan
Journal:  Science       Date:  2014-03-28       Impact factor: 47.728

6.  Molecular architecture of a eukaryotic translational initiation complex.

Authors:  Israel S Fernández; Xiao-Chen Bai; Tanweer Hussain; Ann C Kelley; Jon R Lorsch; V Ramakrishnan; Sjors H W Scheres
Journal:  Science       Date:  2013-11-07       Impact factor: 47.728

7.  Structures of APC/C(Cdh1) with substrates identify Cdh1 and Apc10 as the D-box co-receptor.

Authors:  Paula C A da Fonseca; Eric H Kong; Ziguo Zhang; Anne Schreiber; Mark A Williams; Edward P Morris; David Barford
Journal:  Nature       Date:  2010-11-24       Impact factor: 49.962

8.  Structure of the rabbit ryanodine receptor RyR1 at near-atomic resolution.

Authors:  Zhen Yan; Xiaochen Bai; Chuangye Yan; Jianping Wu; Zhangqiang Li; Tian Xie; Wei Peng; Changcheng Yin; Xueming Li; Sjors H W Scheres; Yigong Shi; Nieng Yan
Journal:  Nature       Date:  2014-12-15       Impact factor: 49.962

9.  RELION: implementation of a Bayesian approach to cryo-EM structure determination.

Authors:  Sjors H W Scheres
Journal:  J Struct Biol       Date:  2012-09-19       Impact factor: 2.867

10.  Architecture of mammalian respiratory complex I.

Authors:  Kutti R Vinothkumar; Jiapeng Zhu; Judy Hirst
Journal:  Nature       Date:  2014-09-07       Impact factor: 49.962

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  174 in total

Review 1.  RNA Structural Differentiation: Opportunities with Pattern Recognition.

Authors:  Christopher S Eubanks; Amanda E Hargrove
Journal:  Biochemistry       Date:  2018-12-18       Impact factor: 3.162

2.  Single-particle electron microscopy in the study of membrane protein structure.

Authors:  Rita De Zorzi; Wei Mi; Maofu Liao; Thomas Walz
Journal:  Microscopy (Oxf)       Date:  2015-10-15       Impact factor: 1.571

Review 3.  Single-particle cryo-EM data acquisition by using direct electron detection camera.

Authors:  Shenping Wu; Jean-Paul Armache; Yifan Cheng
Journal:  Microscopy (Oxf)       Date:  2015-11-06       Impact factor: 1.571

Review 4.  Nano-Bioelectronics.

Authors:  Anqi Zhang; Charles M Lieber
Journal:  Chem Rev       Date:  2015-12-21       Impact factor: 60.622

Review 5.  Insights into the channel gating of P2X receptors from structures, dynamics and small molecules.

Authors:  Jin Wang; Ye Yu
Journal:  Acta Pharmacol Sin       Date:  2016-01       Impact factor: 6.150

6.  Cryo-EM Data Are Superior to Contact and Interface Information in Integrative Modeling.

Authors:  Sjoerd J de Vries; Isaure Chauvot de Beauchêne; Christina E M Schindler; Martin Zacharias
Journal:  Biophys J       Date:  2016-02-01       Impact factor: 4.033

Review 7.  Minicells, Back in Fashion.

Authors:  Madeline M Farley; Bo Hu; William Margolin; Jun Liu
Journal:  J Bacteriol       Date:  2016-03-31       Impact factor: 3.490

8.  Synaptic-vesicle fusion: a need for speed.

Authors:  Mary Munson
Journal:  Nat Struct Mol Biol       Date:  2015-07       Impact factor: 15.369

Review 9.  Evolution of a dynamic molecular switch.

Authors:  Susan S Taylor; Hiruy S Meharena; Alexandr P Kornev
Journal:  IUBMB Life       Date:  2019-05-06       Impact factor: 3.885

10.  An Improved Strategy for Fluorescent Tagging of Membrane Proteins for Overexpression and Purification in Mammalian Cells.

Authors:  Mitra S Rana; Xiyu Wang; Anirban Banerjee
Journal:  Biochemistry       Date:  2018-11-27       Impact factor: 3.162

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