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Literature DB >> 25416940

A tale of chromatin and transcription in 100 structures.

Abstract

To celebrate a century of X-ray crystallography, I describe how 100 crystal structures influenced chromatin and transcription research.

Mesh：

Substances：
Chromatin

Year: 2014 PMID： 25416940 DOI： 10.1016/j.cell.2014.10.047

Source DB: PubMed Journal: Cell ISSN： 0092-8674 Impact factor: 41.582

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Cited

11 in total

Review 1. Molecular dynamics simulations of large macromolecular complexes.

Authors: Juan R Perilla; Boon Chong Goh; C Keith Cassidy; Bo Liu; Rafael C Bernardi; Till Rudack; Hang Yu; Zhe Wu; Klaus Schulten
Journal: Curr Opin Struct Biol Date: 2015-04-04 Impact factor: 6.809

Review 2. Single-Particle Cryo-EM at Crystallographic Resolution.

Authors: Yifan Cheng
Journal: Cell Date: 2015-04-23 Impact factor: 41.582

3. Second-generation method for analysis of chromatin binding with formaldehyde-cross-linking kinetics.

Authors: Hussain Zaidi; Elizabeth A Hoffman; Savera J Shetty; Stefan Bekiranov; David T Auble
Journal: J Biol Chem Date: 2017-09-26 Impact factor: 5.157

4. An Improved Method for Measuring Chromatin-binding Dynamics Using Time-dependent Formaldehyde Crosslinking.

Authors: Elizabeth A Hoffman; Hussain Zaidi; Savera J Shetty; Stefan Bekiranov; David T Auble
Journal: Bio Protoc Date: 2018-02-20

Review 5. Structural Insights into the Eukaryotic Transcription Initiation Machinery.

Authors: Eva Nogales; Robert K Louder; Yuan He
Journal: Annu Rev Biophys Date: 2017-05-22 Impact factor: 12.981

6. Zinc finger transcription factor CASZ1 interacts with histones, DNA repair proteins and recruits NuRD complex to regulate gene transcription.

Authors: Zhihui Liu; Norris Lam; Carol J Thiele
Journal: Oncotarget Date: 2015-09-29

A tale of chromatin and transcription in 100 structures.

Review 1. Molecular dynamics simulations of large macromolecular complexes.

Review 2. Single-Particle Cryo-EM at Crystallographic Resolution.

3. Second-generation method for analysis of chromatin binding with formaldehyde-cross-linking kinetics.

4. An Improved Method for Measuring Chromatin-binding Dynamics Using Time-dependent Formaldehyde Crosslinking.

Review 5. Structural Insights into the Eukaryotic Transcription Initiation Machinery.

6. Zinc finger transcription factor CASZ1 interacts with histones, DNA repair proteins and recruits NuRD complex to regulate gene transcription.

7. Same same but different: The evolution of TBP in archaea and their eukaryotic offspring.

Review 8. Modern epigenetics methods in biological research.

Review 9. The cryo-EM resolution revolution and transcription complexes.

10. Spt5 histone binding activity preserves chromatin during transcription by RNA polymerase II.