Literature DB >> 26546989

Single-particle cryo-EM data acquisition by using direct electron detection camera.

Shenping Wu1, Jean-Paul Armache1, Yifan Cheng2.   

Abstract

Recent advances in single-particle electron cryo-microscopy (cryo-EM) were largely facilitated by the application of direct electron detection cameras. These cameras feature not only a significant improvement in detective quantum efficiency but also a high frame rate that enables images to be acquired as 'movies' made of stacks of many frames. In this review, we discuss how the applications of direct electron detection cameras in cryo-EM have changed the way the data are acquired.
© The Author 2015. Published by Oxford University Press on behalf of The Japanese Society of Microscopy. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

Keywords:  direct electron detection camera; electron cryo-microscopy; single-particle cryo-EM

Mesh:

Year:  2015        PMID: 26546989      PMCID: PMC4749049          DOI: 10.1093/jmicro/dfv355

Source DB:  PubMed          Journal:  Microscopy (Oxf)        ISSN: 2050-5698            Impact factor:   1.571


  30 in total

1.  Subnanometre-resolution electron cryomicroscopy structure of a heterodimeric ABC exporter.

Authors:  JungMin Kim; Shenping Wu; Thomas M Tomasiak; Claudia Mergel; Michael B Winter; Sebastian B Stiller; Yaneth Robles-Colmanares; Robert M Stroud; Robert Tampé; Charles S Craik; Yifan Cheng
Journal:  Nature       Date:  2014-11-02       Impact factor: 49.962

2.  Alignment of cryo-EM movies of individual particles by optimization of image translations.

Authors:  John L Rubinstein; Marcus A Brubaker
Journal:  J Struct Biol       Date:  2015-08-19       Impact factor: 2.867

3.  Specimen charging on thin films with one conducting layer: discussion of physical principles.

Authors:  Robert M Glaeser; Kenneth H Downing
Journal:  Microsc Microanal       Date:  2004-12       Impact factor: 4.127

4.  Description and comparison of algorithms for correcting anisotropic magnification in cryo-EM images.

Authors:  Jianhua Zhao; Marcus A Brubaker; Samir Benlekbir; John L Rubinstein
Journal:  J Struct Biol       Date:  2015-06-15       Impact factor: 2.867

5.  Alignment of direct detection device micrographs using a robust Optical Flow approach.

Authors:  Vahid Abrishami; Javier Vargas; Xueming Li; Yifan Cheng; Roberto Marabini; Carlos Óscar Sánchez Sorzano; José María Carazo
Journal:  J Struct Biol       Date:  2015-02-12       Impact factor: 2.867

6.  Nanoparticle imaging. Electron microscopy of gold nanoparticles at atomic resolution.

Authors:  Maia Azubel; Jaakko Koivisto; Sami Malola; David Bushnell; Greg L Hura; Ai Leen Koh; Hironori Tsunoyama; Tatsuya Tsukuda; Mika Pettersson; Hannu Häkkinen; Roger D Kornberg
Journal:  Science       Date:  2014-08-22       Impact factor: 47.728

7.  Protein subunit structures in the herpes simplex virus A-capsid determined from 400 kV spot-scan electron cryomicroscopy.

Authors:  Z H Zhou; B V Prasad; J Jakana; F J Rixon; W Chiu
Journal:  J Mol Biol       Date:  1994-09-30       Impact factor: 5.469

8.  Structure of the E. coli ribosome-EF-Tu complex at <3 Å resolution by Cs-corrected cryo-EM.

Authors:  Niels Fischer; Piotr Neumann; Andrey L Konevega; Lars V Bock; Ralf Ficner; Marina V Rodnina; Holger Stark
Journal:  Nature       Date:  2015-02-23       Impact factor: 49.962

9.  Electron microscopy: Ultrastable gold substrates for electron cryomicroscopy.

Authors:  Christopher J Russo; Lori A Passmore
Journal:  Science       Date:  2014-12-12       Impact factor: 47.728

10.  Electron counting and beam-induced motion correction enable near-atomic-resolution single-particle cryo-EM.

Authors:  Xueming Li; Paul Mooney; Shawn Zheng; Christopher R Booth; Michael B Braunfeld; Sander Gubbens; David A Agard; Yifan Cheng
Journal:  Nat Methods       Date:  2013-05-05       Impact factor: 28.547

View more
  17 in total

Review 1.  Challenges and opportunities in cryo-EM single-particle analysis.

Authors:  Dmitry Lyumkis
Journal:  J Biol Chem       Date:  2019-02-25       Impact factor: 5.157

Review 2.  Spiraling in Control: Structures and Mechanisms of the Hsp104 Disaggregase.

Authors:  James Shorter; Daniel R Southworth
Journal:  Cold Spring Harb Perspect Biol       Date:  2019-08-01       Impact factor: 10.005

3.  Method to Visualize and Analyze Membrane Interacting Proteins by Transmission Electron Microscopy.

Authors:  Ramakrishnan B Kumar; Lin Zhu; Hans Hebert; Caroline Jegerschöld
Journal:  J Vis Exp       Date:  2017-03-05       Impact factor: 1.355

Review 4.  Dawning of a new era in TRP channel structural biology by cryo-electron microscopy.

Authors:  M Gregor Madej; Christine M Ziegler
Journal:  Pflugers Arch       Date:  2018-01-17       Impact factor: 3.657

5.  Routine determination of ice thickness for cryo-EM grids.

Authors:  William J Rice; Anchi Cheng; Alex J Noble; Edward T Eng; Laura Y Kim; Bridget Carragher; Clinton S Potter
Journal:  J Struct Biol       Date:  2018-07-04       Impact factor: 2.867

6.  IceBreaker: Software for high-resolution single-particle cryo-EM with non-uniform ice.

Authors:  Mateusz Olek; Kevin Cowtan; Donovan Webb; Yuriy Chaban; Peijun Zhang
Journal:  Structure       Date:  2022-02-11       Impact factor: 5.871

Review 7.  Structure of an innexin gap junction channel and cryo-EM sample preparation.

Authors:  Atsunori Oshima
Journal:  Microscopy (Oxf)       Date:  2017-12-01       Impact factor: 1.571

Review 8.  Beyond protein structure determination with MicroED.

Authors:  Chi Nguyen; Tamir Gonen
Journal:  Curr Opin Struct Biol       Date:  2020-06-28       Impact factor: 6.809

9.  Crucial steps in the structure determination of a coronavirus spike glycoprotein using cryo-electron microscopy.

Authors:  Alexandra Walls; M Alejandra Tortorici; Berend-Jan Bosch; Brandon Frenz; Peter J M Rottier; Frank DiMaio; Felix A Rey; David Veesler
Journal:  Protein Sci       Date:  2016-10-18       Impact factor: 6.725

Review 10.  Structural Study of Heterogeneous Biological Samples by Cryoelectron Microscopy and Image Processing.

Authors:  H E White; A Ignatiou; D K Clare; E V Orlova
Journal:  Biomed Res Int       Date:  2017-01-15       Impact factor: 3.411

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.