Literature DB >> 25140429

Insights into the structure and dynamics of measles virus nucleocapsids by 1H-detected solid-state NMR.

Emeline Barbet-Massin1, Michele Felletti1, Robert Schneider2, Stefan Jehle1, Guillaume Communie3, Nicolas Martinez4, Malene Ringkjøbing Jensen2, Rob W H Ruigrok4, Lyndon Emsley1, Anne Lesage1, Martin Blackledge2, Guido Pintacuda5.   

Abstract

(1)H-detected solid-state nuclear magnetic resonance (NMR) experiments are recorded on both intact and trypsin-cleaved sedimented measles virus (MeV) nucleocapsids under ultra-fast magic-angle spinning. High-resolution (1)H,(15)N-fingerprints allow probing the degree of molecular order and flexibility of individual capsid proteins, providing an exciting atomic-scale complement to electro microscopy (EM) studies of the same systems.
Copyright © 2014 Biophysical Society. Published by Elsevier Inc. All rights reserved.

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Year:  2014        PMID： 25140429      PMCID： PMC4142229          DOI： 10.1016/j.bpj.2014.05.048

Source DB:  PubMed          Journal:  Biophys J        ISSN： 0006-3495            Impact factor:   4.033


  54 in total

1.  Structure and backbone dynamics of a microcrystalline metalloprotein by solid-state NMR.

Authors:  Michael J Knight; Andrew J Pell; Ivano Bertini; Isabella C Felli; Leonardo Gonnelli; Roberta Pierattelli; Torsten Herrmann; Lyndon Emsley; Guido Pintacuda
Journal:  Proc Natl Acad Sci U S A       Date:  2012-06-21       Impact factor: 11.205

2.  A sedimented sample of a 59 kDa dodecameric helicase yields high-resolution solid-state NMR spectra.

Authors:  Carole Gardiennet; Anne K Schütz; Andreas Hunkeler; Britta Kunert; Laurent Terradot; Anja Böckmann; Beat H Meier
Journal:  Angew Chem Int Ed Engl       Date:  2012-06-27       Impact factor: 15.336

3.  A proton-detected 4D solid-state NMR experiment for protein structure determination.

Authors:  Matthias Huber; Sebastian Hiller; Paul Schanda; Matthias Ernst; Anja Böckmann; René Verel; Beat H Meier
Journal:  Chemphyschem       Date:  2011-02-15       Impact factor: 3.102

4.  Structure calculation from unambiguous long-range amide and methyl 1H-1H distance restraints for a microcrystalline protein with MAS solid-state NMR spectroscopy.

Authors:  Rasmus Linser; Benjamin Bardiaux; Victoria Higman; Uwe Fink; Bernd Reif
Journal:  J Am Chem Soc       Date:  2011-03-24       Impact factor: 15.419

5.  Motions on the millisecond time scale and multiple conformations of HIV-1 capsid protein: implications for structural polymorphism of CA assemblies.

Authors:  In-Ja L Byeon; Guangjin Hou; Yun Han; Christopher L Suiter; Jinwoo Ahn; Jinwon Jung; Chang-Hyeock Byeon; Angela M Gronenborn; Tatyana Polenova
Journal:  J Am Chem Soc       Date:  2012-04-02       Impact factor: 15.419

6.  Backbone assignment of fully protonated solid proteins by 1H detection and ultrafast magic-angle-spinning NMR spectroscopy.

Authors:  Alessandro Marchetti; Stefan Jehle; Michele Felletti; Michael J Knight; Yao Wang; Zhi-Qiang Xu; Ah Young Park; Gottfried Otting; Anne Lesage; Lyndon Emsley; Nicholas E Dixon; Guido Pintacuda
Journal:  Angew Chem Int Ed Engl       Date:  2012-09-28       Impact factor: 15.336

7.  Rapid measurement of pseudocontact shifts in metalloproteins by proton-detected solid-state NMR spectroscopy.

Authors:  Michael J Knight; Isabella C Felli; Roberta Pierattelli; Ivano Bertini; Lyndon Emsley; Torsten Herrmann; Guido Pintacuda
Journal:  J Am Chem Soc       Date:  2012-08-31       Impact factor: 15.419

8.  On the use of ultracentrifugal devices for sedimented solute NMR.

Authors:  Ivano Bertini; Frank Engelke; Leonardo Gonnelli; Benno Knott; Claudio Luchinat; David Osen; Enrico Ravera
Journal:  J Biomol NMR       Date:  2012-08-08       Impact factor: 2.835

9.  Solid-state NMR analysis of membrane proteins and protein aggregates by proton detected spectroscopy.

Authors:  Donghua H Zhou; Andrew J Nieuwkoop; Deborah A Berthold; Gemma Comellas; Lindsay J Sperling; Ming Tang; Gautam J Shah; Elliott J Brea; Luisel R Lemkau; Chad M Rienstra
Journal:  J Biomol NMR       Date:  2012-09-18       Impact factor: 2.835

10.  Atomic model of the type III secretion system needle.

Authors:  Antoine Loquet; Nikolaos G Sgourakis; Rashmi Gupta; Karin Giller; Dietmar Riedel; Christian Goosmann; Christian Griesinger; Michael Kolbe; David Baker; Stefan Becker; Adam Lange
Journal:  Nature       Date:  2012-05-20       Impact factor: 49.962
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  14 in total

1.  Expanding the horizons for structural analysis of fully protonated protein assemblies by NMR spectroscopy at MAS frequencies above 100 kHz.

Authors:  Jochem Struppe; Caitlin M Quinn; Manman Lu; Mingzhang Wang; Guangjin Hou; Xingyu Lu; Jodi Kraus; Loren B Andreas; Jan Stanek; Daniela Lalli; Anne Lesage; Guido Pintacuda; Werner Maas; Angela M Gronenborn; Tatyana Polenova
Journal:  Solid State Nucl Magn Reson       Date:  2017-07-03       Impact factor: 2.293

2.  Selective excitation enables assignment of proton resonances and (1)H-(1)H distance measurement in ultrafast magic angle spinning solid state NMR spectroscopy.

Authors:  Rongchun Zhang; Ayyalusamy Ramamoorthy
Journal:  J Chem Phys       Date:  2015-07-21       Impact factor: 3.488

Review 3.  How order and disorder within paramyxoviral nucleoproteins and phosphoproteins orchestrate the molecular interplay of transcription and replication.

Authors:  Sonia Longhi; Louis-Marie Bloyet; Stefano Gianni; Denis Gerlier
Journal:  Cell Mol Life Sci       Date:  2017-06-09       Impact factor: 9.261

Review 4.  Structural biology of supramolecular assemblies by magic-angle spinning NMR spectroscopy.

Authors:  Caitlin M Quinn; Tatyana Polenova
Journal:  Q Rev Biophys       Date:  2017-01       Impact factor: 5.318

5.  Ubiquitin immobilized on mesoporous MCM41 silica surfaces - Analysis by solid-state NMR with biophysical and surface characterization.

Authors:  Nurit Adiram-Filiba; Avital Schremer; Eli Ohaion; Merav Nadav-Tsubery; Tammi Lublin-Tennenbaum; Keren Keinan-Adamsky; Gil Goobes
Journal:  Biointerphases       Date:  2017-05-31       Impact factor: 2.456

6.  Dynamic Nuclear Polarization Magic-Angle Spinning Nuclear Magnetic Resonance Combined with Molecular Dynamics Simulations Permits Detection of Order and Disorder in Viral Assemblies.

Authors:  Rupal Gupta; Huilan Zhang; Manman Lu; Guangjin Hou; Marc Caporini; Melanie Rosay; Werner Maas; Jochem Struppe; Jinwoo Ahn; In-Ja L Byeon; Hartmut Oschkinat; Kristaps Jaudzems; Emeline Barbet-Massin; Lyndon Emsley; Guido Pintacuda; Anne Lesage; Angela M Gronenborn; Tatyana Polenova
Journal:  J Phys Chem B       Date:  2019-06-11       Impact factor: 2.991

7.  Phase cycling schemes for finite-pulse-RFDR MAS solid state NMR experiments.

Authors:  Rongchun Zhang; Yusuke Nishiyama; Pingchuan Sun; Ayyalusamy Ramamoorthy
Journal:  J Magn Reson       Date:  2015-01-06       Impact factor: 2.229

Review 8.  Magic angle spinning NMR of viruses.

Authors:  Caitlin M Quinn; Manman Lu; Christopher L Suiter; Guangjin Hou; Huilan Zhang; Tatyana Polenova
Journal:  Prog Nucl Magn Reson Spectrosc       Date:  2015-02-16       Impact factor: 9.795

Review 9.  NMR of Macromolecular Assemblies and Machines at 1 GHz and Beyond: New Transformative Opportunities for Molecular Structural Biology.

Authors:  Caitlin M Quinn; Mingzhang Wang; Tatyana Polenova
Journal:  Methods Mol Biol       Date:  2018

10.  Structure of fully protonated proteins by proton-detected magic-angle spinning NMR.

Authors:  Loren B Andreas; Kristaps Jaudzems; Jan Stanek; Daniela Lalli; Andrea Bertarello; Tanguy Le Marchand; Diane Cala-De Paepe; Svetlana Kotelovica; Inara Akopjana; Benno Knott; Sebastian Wegner; Frank Engelke; Anne Lesage; Lyndon Emsley; Kaspars Tars; Torsten Herrmann; Guido Pintacuda
Journal:  Proc Natl Acad Sci U S A       Date:  2016-08-03       Impact factor: 11.205
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