Literature DB >> 22916960

Rapid measurement of pseudocontact shifts in metalloproteins by proton-detected solid-state NMR spectroscopy.

Michael J Knight1, Isabella C Felli, Roberta Pierattelli, Ivano Bertini, Lyndon Emsley, Torsten Herrmann, Guido Pintacuda.   

Abstract

Pseudocontact shifts (PCSs) arise in paramagnetic systems in which the susceptibility tensor is anisotropic. PCSs depend upon the distance from the paramagnetic center and the position relative to the susceptibility tensor, and they can be used as structural restraints in protein structure determination. We show that the use of (1)H-detected solid-state correlations provides facile and rapid detection and assignment of site-specific PCSs, including resolved (1)H PCSs, in a large metalloprotein, Co(2+)-substituted superoxide dismutase (Co(2+)-SOD). With only 3 mg of sample and a small set of experiments, several hundred PCSs were measured and assigned, and these PCSs were subsequently used in combination with (1)H-(1)H distance and dihedral angle restraints to determine the protein backbone geometry with a precision paralleling those of state-of-the-art liquid-state determinations of diamagnetic proteins, including a well-defined active site.

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Year:  2012        PMID: 22916960     DOI: 10.1021/ja306813j

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  18 in total

1.  Sensitivity and resolution of proton detected spectra of a deuterated protein at 40 and 60 kHz magic-angle-spinning.

Authors:  Andrew J Nieuwkoop; W Trent Franks; Kristina Rehbein; Anne Diehl; Ümit Akbey; Frank Engelke; Lyndon Emsley; Guido Pintacuda; Hartmut Oschkinat
Journal:  J Biomol NMR       Date:  2015-02-08       Impact factor: 2.835

2.  Out-and-back 13C-13C scalar transfers in protein resonance assignment by proton-detected solid-state NMR under ultra-fast MAS.

Authors:  Emeline Barbet-Massin; Andrew J Pell; Kristaps Jaudzems; W Trent Franks; Joren S Retel; Svetlana Kotelovica; Inara Akopjana; Kaspars Tars; Lyndon Emsley; Hartmut Oschkinat; Anne Lesage; Guido Pintacuda
Journal:  J Biomol NMR       Date:  2013-06-29       Impact factor: 2.835

3.  Practical considerations over spectral quality in solid state NMR spectroscopy of soluble proteins.

Authors:  Marco Fragai; Claudio Luchinat; Giacomo Parigi; Enrico Ravera
Journal:  J Biomol NMR       Date:  2013-08-30       Impact factor: 2.835

4.  Proton-detected 2D radio frequency driven recoupling solid-state NMR studies on micelle-associated cytochrome-b(5).

Authors:  Manoj Kumar Pandey; Subramanian Vivekanandan; Kazutoshi Yamamoto; Sangchoul Im; Lucy Waskell; Ayyalusamy Ramamoorthy
Journal:  J Magn Reson       Date:  2014-03-01       Impact factor: 2.229

5.  Selective excitation enables assignment of proton resonances and (1)H-(1)H distance measurement in ultrafast magic angle spinning solid state NMR spectroscopy.

Authors:  Rongchun Zhang; Ayyalusamy Ramamoorthy
Journal:  J Chem Phys       Date:  2015-07-21       Impact factor: 3.488

6.  Insights into the structure and dynamics of measles virus nucleocapsids by 1H-detected solid-state NMR.

Authors:  Emeline Barbet-Massin; Michele Felletti; Robert Schneider; Stefan Jehle; Guillaume Communie; Nicolas Martinez; Malene Ringkjøbing Jensen; Rob W H Ruigrok; Lyndon Emsley; Anne Lesage; Martin Blackledge; Guido Pintacuda
Journal:  Biophys J       Date:  2014-08-19       Impact factor: 4.033

7.  Rapid Quantitative Measurements of Paramagnetic Relaxation Enhancements in Cu(II)-Tagged Proteins by Proton-Detected Solid-State NMR Spectroscopy.

Authors:  Dwaipayan Mukhopadhyay; Philippe S Nadaud; Matthew D Shannon; Christopher P Jaroniec
Journal:  J Phys Chem Lett       Date:  2017-11-20       Impact factor: 6.475

Review 8.  New NMR tools for protein structure and function: Spin tags for dynamic nuclear polarization solid state NMR.

Authors:  Rivkah Rogawski; Ann E McDermott
Journal:  Arch Biochem Biophys       Date:  2017-06-13       Impact factor: 4.013

9.  Composite-180° pulse-based symmetry sequences to recouple proton chemical shift anisotropy tensors under ultrafast MAS solid-state NMR spectroscopy.

Authors:  Manoj Kumar Pandey; Michal Malon; Ayyalusamy Ramamoorthy; Yusuke Nishiyama
Journal:  J Magn Reson       Date:  2014-11-18       Impact factor: 2.229

Review 10.  Probing structure and dynamics of protein assemblies by magic angle spinning NMR spectroscopy.

Authors:  Si Yan; Christopher L Suiter; Guangjin Hou; Huilan Zhang; Tatyana Polenova
Journal:  Acc Chem Res       Date:  2013-02-13       Impact factor: 22.384

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